CF835257

Overview
NameCF835257
Unique NameCF835257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:233..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.733e-20
Identity = 49/164 (29.88%), Postives = 97/164 (59.15%), Query Frame = 3
Query:  135 WLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDV 626
            WL+  L+  + + F+ R   K LPPGP   P++GN+ +LG+ PH+SL  L+  +GP++++ LG V TVVV SP  A+ +L+ HD   C R  P+  ++  F +    L +      ++++RK+  + +F+ ++ ++ + +R +++  L+    D+  +G ++D+
Sbjct:   15 WLLLLLIPPLLIFFLLRSP-KNLPPGPPRLPILGNIHQLGSLPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTR--PKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVDL 175          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.148e-19
Identity = 50/175 (28.57%), Postives = 98/175 (56.00%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQ 632
            M +L++ +L+L   L + +      R +   LPP P   P+IGNL +LG  PH+SL  LA   GP++ L LG + T++VS+  +A+ IL+ HDL F  R  P    +    +    +A+ P    W+ +RKI  + + + +++++ + +R +++  ++  +  +C  G+A+++ +
Sbjct:    1 MAILVS-LLFLAIALTFFLLKLNEKREKKPNLPPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASR--PSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSE 172          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.500e-19
Identity = 55/178 (30.90%), Postives = 101/178 (56.74%), Query Frame = 3
Query:  132 LWLVFTLVWVMALSFVSR--GRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            ++L F L+  + L F  R      +LPPGP   P+IGNL +LG   H+S  KL++ +GP+M LR G V  VV S+   A+ +L+ HDL  C R  P+   +  F ++   + +      W+ +RK++ + +F+S+KL A + +R ++ + L+  V ++ +    +D+ +A F+ + ++
Sbjct:    3 IFLCFLLLLPLFLVFYKRLLPSKGKLPPGPISLPIIGNLHQLGKSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTR--PKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTLVDLRKALFSYTASI 178          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.959e-19
Identity = 50/170 (29.41%), Postives = 97/170 (57.06%), Query Frame = 3
Query:  117 LINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLEL-GAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAID 623
            L++  L++ F  +      +++  + K+LPPGP   P IG +  L G  PH+ L  LA+ +GP+M L+LG+V+ VVV+SP MAK +L+ HD++F  R  P+ +      ++   +A+ P    W+ +RKI  M + +++ + +   +R  ++  L+  ++    +G+ ++
Sbjct:    3 LVSIFLFISFLFLLRKWKKYLNNSQTKKLPPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASR--PKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVN 170          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.558e-19
Identity = 55/174 (31.61%), Postives = 96/174 (55.17%), Query Frame = 3
Query:  138 LVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            LV  +   + +SF++R R    PPGPR +P+IGN+L +    H+ LA LAK +G +  LR+G +    VSSP +A+ +LQ  D  F +R    AI  L +   +  +A+      W+ +RK+  M +F+ ++ ++   + R ++  ++  V  +C  GK I+VG+  F  + N+
Sbjct:   19 LVIVVSLFIFISFITRRRRPPYPPGPRGWPIIGNMLMMDQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRAD--MAFAHYGPFWRQMRKVCVMKVFSRKRAESWASV-RDEVDKMVRSV--SCNVGKPINVGEQIFALTRNI 187          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.558e-19
Identity = 57/173 (32.95%), Postives = 97/173 (56.07%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQ 632
            L I   L L F +  ++   +++  RH+ LPPGP  +PV+G L  LG  PH +LA +AK +GP+M L++G     V S+P  AKA L+  D++F +R  P    +    ++   + +      WK LRK+SN+HI   + L   +E+R+K++  +L  + ++ R G+ + V +
Sbjct:    9 LHIAASLMLFFHVQKLVQYLWMNSRRHR-LPPGPIGWPVLGALRLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNR--PPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPVVVSE 178          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.341e-19
Identity = 56/184 (30.43%), Postives = 103/184 (55.98%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            M + +  +L L   L++   LS  S+G+   LPPGP   P+IGNL +LG   H+S  KL++ +GP+M L  G V  VVVS+   A+ +L+ HDL  C R  P+   +  F ++   + +      W+ +RK++ + +F+S+KL A + +R ++ + L+  +  +      +D+ +A F+ + ++
Sbjct:    1 MSISLYFLLLLPLFLIFFKKLS-PSKGK---LPPGPLGLPIIGNLHQLGKSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTR--PKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKSAETRTMVDLRKALFSYTASI 178          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.364e-19
Identity = 55/167 (32.93%), Postives = 95/167 (56.89%), Query Frame = 3
Query:  132 LWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQ 632
            L L F +  ++   +++  RH+ LPPGP  +PV+G L  LG  PH +LA +AK +GP+M L++G     V S+P  AKA L+  D++F +R  P    +    ++   + +      WK LRK+SN+HI   + L   +E+R+K++  +L  + ++ R G+ + V +
Sbjct:   15 LMLFFHVQKLVQYLWMNSRRHR-LPPGPIGWPVLGALPLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNR--PPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPVVVSE 178          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.699e-19
Identity = 47/179 (26.26%), Postives = 100/179 (55.87%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFN 644
            M+++I   L L   L  ++    + +  +  LPP P   PVIGNL +L   PH++L+ L+  HGP+M LR G+V  ++VSS  +A  +++ HDL F +R + ++   +     +  L + P    W+N++ +  +H+ +++ + ++++ R ++I  L+  +E+   +  ++++ +   N
Sbjct:    1 MEMMILISLCLTTFLTILLFFKSLLKRPNSNLPPSPWRLPVIGNLHQLSLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRD--LVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETLEEASLSSSSVNLSKLITN 177          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.444e-19
Identity = 47/135 (34.81%), Postives = 80/135 (59.26%), Query Frame = 3
Query:  192 HKQLPPGPRPYPVIGNLLEL-GAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFS-LAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHV 590
            H +LPPGP   P++GN  +L G   H  L  LAK +GP+M L++G+V+T+V SSP +A+ I + HD+ F DR  P  + S     ++FS +   P    W+ LRKIS M + + + + + + +R +++ + +  +
Sbjct:   23 HDELPPGPPQIPILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADR--PSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSI 155          
The following BLAST results are available for this feature:
BLAST of CF835257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
C71B6_ARATH6.733e-2029.88Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71A1_PERAE1.148e-1928.57Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71BL_ARATH1.500e-1930.90Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71D7_SOLCH1.959e-1929.41Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C84A1_ARATH2.558e-1931.61Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C75A7_EUSGR2.558e-1932.95Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BM_ARATH3.341e-1930.43Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C75A5_EUSGR4.364e-1932.93Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71AG_ARATH5.699e-1926.26Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO7.444e-1934.81Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835257 ID=CF835257; Name=CF835257; organism=Citrus sinensis; type=EST; length=660bp
TTTTTTGGGTATCCATAAGAAGCACATGTAAACCAATGCGTGAAAAAACC
TATGTATAGATACGGGGTTACAGTGTGCTAAACCAAAATATCAACTTCAA
TTCAAAGATGGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACAT
TGGTTTGGGTGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAG
CTTCCACCGGGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCT
AGGTGCTAAACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGC
CCATAATGAGTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCT
CCAAGCATGGCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGA
TCGAATGGTCCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAAT
TCAGTTTGGCCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAA
ATAAGCAACATGCATATTTTCACTAGTCAGAAACTCGATGCCAATCAAGA
GCTCCGGCGCAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATT
GCCGTGCGGGTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCA
CTTAATTTAT
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