CF835258

Overview
NameCF835258
Unique NameCF835258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1347..2039. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.227e-32
Identity = 68/160 (42.50%), Postives = 99/160 (61.88%), Query Frame = -2
Query:  225 VCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 692
            V + + ++ES  + LPYLQA VKE                 +  ++ G+T+PKG  V VN  AIGRD   W +P  F PERFL S+ ++ G+ F+ IPFG+GRRICPG PLA+R++ L+L SL+++F W+L     N  +DME+ F L++  A+PL  +P
Sbjct:  324 VGRSSTVKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIP 483          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.909e-32
Identity = 70/159 (44.03%), Postives = 93/159 (58.49%), Query Frame = -2
Query:  225 PIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG----SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 677
            P+ ESDI +LPYLQAV+KE                 +  EI G+ +PKG+ +  N+WAI RD   W +P  F PERFL     S  D KG +FELIPFGAGRRIC GL L +R +  +  +L+  FDW+L        ++ME+ +GLT+Q+A PL   P
Sbjct:  341 PVNESDIAQLPYLQAVIKENFRLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPLVVHP 499          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.799e-32
Identity = 70/155 (45.16%), Postives = 95/155 (61.29%), Query Frame = -2
Query:  225 IEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHN--MDMEDKFGLTVQKAQPLHAVP 674
            IEESDI  LPYLQA+V+E                   V + G+ +P   ++FVNVWAIGRD + W+NP  F PERF     S  D +GQ++  IPFG+GRR CPG  LA++++H+ L  +I  F WK DN N  +DME+K G+T+ +A P+  VP
Sbjct:  339 IEESDIVNLPYLQAIVRETLRIHPGGPLIVRESSK-SVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGNNKVDMEEKSGITLPRAHPIICVP 492          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.799e-32
Identity = 67/154 (43.51%), Postives = 94/154 (61.04%), Query Frame = -2
Query:  225 IEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 674
            I E DI RL YL+ V+KE                 KDV+I G+ +PK   + VN+WAI R+ + W +P  FIPERF+ S  D+KG NFEL+PFG+GRRICPG+ + + ++HL L +L+  FDWKL       ++D+E+ +GL   K  PL  +P
Sbjct:  337 IIEEDIERLQYLKMVIKETFRINPLVPLLIPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQLIP 490          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.480e-32
Identity = 69/152 (45.39%), Postives = 99/152 (65.13%), Query Frame = -2
Query:  228 ESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL---GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 668
            E+DI++LPYLQA+ KE                 +  E+ G  +PKG ++ VN+WAIGRD S W+NP+ F P+RFL    +  D +G +FELIPFGAGRRIC G  L I ++  +LG+L++SFDW+L +    ++M++ FGL +QKA PL A+
Sbjct:  347 EADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFDWELPSSVIELNMDEPFGLALQKAVPLAAM 498          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.463e-32
Identity = 66/154 (42.86%), Postives = 94/154 (61.04%), Query Frame = -2
Query:  225 IEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 674
            I E DI  L YL+ VVKE                 KDV+I G+ +PK   + VN+WAI R+ + W +P  FIPERF+ +  D+KG NFEL+PFG+GRRICPG+ + + ++HL L +L+  FDWKL    +  ++D+E+ +GL   K  PL  +P
Sbjct:  337 ITEEDIEGLEYLKMVVKETLRINPLVPLLTPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLELIP 490          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.444e-31
Identity = 70/152 (46.05%), Postives = 94/152 (61.84%), Query Frame = -2
Query:  228 ESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 668
            ESDI  LPYL+A+ KE                 +   + G+ +PK  ++ VN+WAIGRD   W+NP  F PERFL    S  D +G +FELIPFGAGRRIC G  + I M+  +LG+L++SFDWKL +    ++ME+ FGL +QKA PL A+
Sbjct:  343 ESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAM 494          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.885e-31
Identity = 66/154 (42.86%), Postives = 94/154 (61.04%), Query Frame = -2
Query:  225 IEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 674
            IEESD+ ++PYL+AV+KE                 +D ++ G+ V  G +V +N WAIGRD S W+   TF+PERFL ++ D++G +FELIPFG+GRR CPG   A  +  L L +L++ FD+KL N     ++DM +  G T+ K  PL  VP
Sbjct:  351 IEESDLEKMPYLKAVMKESLRLHAPVPLLVPRESTRDTKVLGYDVASGTRVLINCWAIGRDSSVWEESETFLPERFLETSIDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVRVEDLDMSEGSGFTIHKKFPLLVVP 504          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.462e-31
Identity = 75/154 (48.70%), Postives = 100/154 (64.94%), Query Frame = -2
Query:  228 ESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKD-VEIAGFTVPKGAQVFVNVWAIGRDESTW-DNPHTFIPERFL-GSNA--DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAV 668
            ESDI  LPYLQA+ KE                 +  V++ G+ +PKG ++ VN+WAIGRD S W DNP+ F PERFL G NA  D +G +FELIPFGAGRRIC G  + I ++  +LG+L++SFDWKL      ++M++ FGL +QKA PL A+
Sbjct:  351 ESDIPNLPYLQAICKETFRKHPSTPLNLPRNCIRGHVDVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKLGFSEDELNMDETFGLALQKAVPLAAM 504          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.462e-31
Identity = 70/152 (46.05%), Postives = 94/152 (61.84%), Query Frame = -2
Query:  228 ESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 668
            ESDI  LPYL+A+ KE                 +   + G+ +PK  ++ VN+WAIGRD   W+NP  F PERFL    S  D +G +FELIPFGAGRRIC G  + I M+  +LG+L++SFDWKL +    ++ME+ FGL +QKA PL A+
Sbjct:  343 ESDIPNLPYLRAICKETFRKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAM 494          
The following BLAST results are available for this feature:
BLAST of CF835258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
C80A1_BERST2.227e-3242.50Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
F3PH_ARATH2.909e-3244.03Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C93A2_SOYBN3.799e-3245.16Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71BC_ARATH3.799e-3243.51Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C75A5_EUSGR6.480e-3245.39Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71BD_ARATH8.463e-3242.86Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C75A3_PETHY1.444e-3146.05Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C71A6_NEPRA1.885e-3142.86Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C75A4_GENTR2.462e-3148.70Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C75A1_PETHY2.462e-3146.05Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835258 ID=CF835258; Name=CF835258; organism=Citrus sinensis; type=EST; length=693bp
TTTTTTAATACAGTCAGATTTTAATGCTATTAAATCGCATGACTTTATAG
TTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAAAAAATA
AGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAACCACCAA
GCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCTACGAAC
TATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTTGAGCCT
TCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGGTTATCA
AGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATGTAACAT
TCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTCCGAAGG
GAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCTAAGAAC
CTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATCTCTGCC
AATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTGTGAAGC
CTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAGGGAGCT
GCAGGGTGCAATCTCAAAGTTTCTTTAACAACAGCTTGTAGATAAGGTAG
CCGAGTGATGTCAGATTCCTCAATTGGGTTACACTTGCAAACT
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