CF835258

Overview
NameCF835258
Unique NameCF835258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18
Identity = 56/154 (36.36%), Postives = 78/154 (50.65%), Query Frame = -2
Query:  231 NPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERF-LGS-NADFKG-QNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDW-KLDNHNMDMEDKFGLTVQKAQPLHA 680
            N I+E DI ++PYL AVVKE                 +  ++ G+ +P G  V + +  I  D + W  P  F P+RF LG  +AD  G    ++IPFG GRRICPGL +A   + LML  L+  F+W   +N  +D  +K   TV     L A
Sbjct:  352 NKIDEKDIEKMPYLNAVVKELLRKHPPTYMSLTHAVTEPAKLGGYDIPTGVNVEIFLPGISDDPNLWSEPEKFDPDRFYLGKEDADITGVSGVKMIPFGMGRRICPGLNMATVHVSLMLARLVQEFEWADPENTRVDFTEKLEFTVVMKNTLRA 505          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = -2
Query:  309 IEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNA--DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 674
            + E DI +LPYLQAVVKE                  D ++ G+ +P  +++ VN W +  + + W  P  F PERF    +  +  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  347 VTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 470          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18
Identity = 56/158 (35.44%), Postives = 78/158 (49.37%), Query Frame = -2
Query:  237 VCKCNPIEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXK-DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL--GSNADFK--GQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDW-KLDNHNMDMEDKFGLTVQKAQPL 692
            V K   + E D+  + YL AVVKE                   D  I G+ VP G    VN WAI RD   W +P  F+PERF+  G +A+F   G +  L PFG+GRR CPG  L    ++  + SL++ F+W   D   +D+ +   L+ + A PL
Sbjct:  357 VGKARAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEWVPSDEKGVDLTEVLKLSSEMANPL 514          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18
Identity = 44/124 (35.48%), Postives = 66/124 (53.23%), Query Frame = -2
Query:  309 IEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG--SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 674
            I E D  +LPYLQAV+KE                  D ++ G+ +P  +++ VN W +  +   W  P  F PERFL   S  +  G +F  +PFG GRR CPG+ LA+ +L + +G L+ +F+
Sbjct:  346 ITEPDTYKLPYLQAVIKETLRLRMAIPLFLPHMNLHDAKLGGYDIPAESKILVNAWFLANNPEHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18
Identity = 45/123 (36.59%), Postives = 63/123 (51.22%), Query Frame = -2
Query:  300 ESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 668
            E  I  L Y++ V+KE                 +  +I G+ V +G +V +N WA+ R    WD+   F PERF    AD+KG  FE +PFG GRR CPG    + +L L++  L+  FDW L
Sbjct:  371 EGLIDNLRYMKMVIKETMRLNPVLPLLMPHLCRETCDIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERFEDGMADYKGSRFEYLPFGTGRRRCPGDTFGMVLLELIVARLLYYFDWSL 493          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.549e-17
Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = -2
Query:  309 IEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG--SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 674
            + E D+ +LPYLQAV+KE                  D ++ GF +P  +++ VN W +  + + W  P  F PERFL   S+ +  G +F  +PFG GRR CPG+ LA+ +L + +G L+ + +
Sbjct:  347 VTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVE 470          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = -2
Query:  228 IEESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAQPLHAV 674
            I+E D+ +LPYLQ+VVKE                    E+ GF + +   + VN +A+ RD +TW++P  F PERFL    + +    + I FG+GRR CPG  LA   +   +G+++  FD  +    + M++  GL +  A PL  +
Sbjct:  348 IQEKDLPKLPYLQSVVKEGLRLHPPLPLMVRTFQR-SCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFLRQEEERRA--LKHIAFGSGRRGCPGSNLATIFIGTAIGTMVQCFDLSIKGDKVKMDEVGGLNLTMAHPLECI 493          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16
Identity = 44/123 (35.77%), Postives = 62/123 (50.41%), Query Frame = -2
Query:  306 ESDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN--ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDW 668
            ESD+  L Y++A VKE                  D  + G+ +PKG+ V ++   IGR+ S WD PH F PER L +N   D    +  +I F AGRR C G+ +   M +++L  LI  F W
Sbjct:  368 ESDLPNLNYVKACVKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTW 490          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: CP1A1_BALAC (Cytochrome P450 1A1 OS=Balaenoptera acutorostrata GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15
Identity = 50/146 (34.25%), Postives = 74/146 (50.68%), Query Frame = -2
Query:  234 SDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADF-KGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL-DNHNMDMEDKFGLTVQKAQPLH 665
            SD  RLPYL+A + E                 +D  + GF +PKG  VFVN W I  D+  WD+P  F PERFL ++    K  + ++I FG G+R C G  +A   + L L  L+   ++++     +DM   +GLT++ A   H
Sbjct:  364 SDRPRLPYLEAFILETFRHSSFLPFTIPHSTTRDTSLNGFYIPKGRCVFVNQWQINHDQKLWDDPSAFWPERFLTADGTINKALSEKVILFGLGKRKCIGETIARWEVFLFLAILLQQVEFRVTPGVKVDMTPVYGLTMKHAHCEH 509          
BLAST of CF835258 vs. ExPASy Swiss-Prot
Match: CP2U1_MOUSE (Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = -2
Query:  255 SDITRLPYLQAVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNAD-FKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTV 665
            +D  ++PY +A + E                 +   + GFT+PKG  V +N+W++ RD + W+ P  F P RFL       K + F  IPFG G+R+C G  LA   L LM  SL+ +F + L   +    M  +FGLT+
Sbjct:  381 TDKAQMPYTEATIMEVQRLSMVVPLAIPHMTSEKTVLQGFTIPKGTVVLINLWSVHRDPAIWEKPDDFCPHRFLDDQGQLLKRETF--IPFGIGKRVCMGEQLAKMELFLMFVSLMQTFTFALPEGSEKPVMTGRFGLTL 518          
The following BLAST results are available for this feature:
BLAST of CF835258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
C77A2_SOLME1.401e-1836.36Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
TCMO_SOYBN1.830e-1835.48Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
C78A3_SOYBN1.830e-1835.44Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
TCMO_CATRO2.391e-1835.48Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]
C99A2_ORYSJ9.084e-1836.59Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
TCMO_MEDSA1.549e-1734.68Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
C75AK_ARATH4.508e-1732.89Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C79A2_ARATH1.713e-1635.77Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
CP1A1_BALAC1.450e-1534.25Cytochrome P450 1A1 OS=Balaenoptera acutorostrata ... [more]
CP2U1_MOUSE2.474e-1533.57Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835258 ID=CF835258; Name=CF835258; organism=Citrus sinensis; type=EST; length=693bp
TTTTTTAATACAGTCAGATTTTAATGCTATTAAATCGCATGACTTTATAG
TTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAAAAAATA
AGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAACCACCAA
GCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCTACGAAC
TATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTTGAGCCT
TCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGGTTATCA
AGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATGTAACAT
TCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTCCGAAGG
GAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCTAAGAAC
CTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATCTCTGCC
AATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTGTGAAGC
CTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAGGGAGCT
GCAGGGTGCAATCTCAAAGTTTCTTTAACAACAGCTTGTAGATAAGGTAG
CCGAGTGATGTCAGATTCCTCAATTGGGTTACACTTGCAAACT
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