CF835261

Overview
NameCF835261
Unique NameCF835261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2U1_BOVIN (Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25
Identity = 64/187 (34.22%), Postives = 98/187 (52.41%), Query Frame = 1
Query:   88 EDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFR---LLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKP 639
            ED +  ++ D+  AG DTT  S  W +  +  +P +Q+K  EE+ RVIG +R  + TD + +PY +A   E  RL    PL +PH  +    + G+ +PKG+ I  N+W+V RDPA+W+ P            +D +G   +    +PFG G+RVC G QL    +  M   L+  F +  P+  KP
Sbjct:  339 EDYLFYIIGDLFIAGTDTTTNSLLWCLLYMSLHPNIQEKIHEEIARVIGADRAPSLTDKAQMPYTEATIMEVQRLSTVVPLSIPHMTSEKTVLQGFTIPKGTIILPNLWSVHRDPAIWEKP----NDFYPDRFLDDQGQLIKKETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFTFVLPKDSKP 521          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP1A1_CAVPO (Cytochrome P450 1A1 OS=Cavia porcellus GN=CYP1A1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.114e-25
Identity = 73/210 (34.76%), Postives = 99/210 (47.14%), Query Frame = 1
Query:   49 DALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXD--VDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 672
            D  L       +S+  IIG++ D+  AG DT   +  W +  L+ NPR+Q+K QEELD VIG ER     D   LPY++A   E  R     P  +PH    +  + G+ +PKG  I VN W +  D  +W DP           D  VD K    ++  FG G+R C G  +G   V   L  LL    ++   GVK   IDM+   GL
Sbjct:  287 DRKLDKNANIQISDQKIIGIVLDLFGAGFDTITTAISWSLLYLVMNPRIQKKIQEELDTVIGRERQPQLADRPKLPYMEAFISEVFRYSSFMPFTIPHSTTKDTSLNGFYIPKGCCIFVNQWQINHDQKLWGDPSVFRPERFLSPDGTVD-KALSEKVTIFGLGKRRCLGEVIGRWEVFLFLAILLQQLEFSTSPGVK---IDMTPIYGL 492          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP17A_MESAU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocricetus auratus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.032e-25
Identity = 64/190 (33.68%), Postives = 100/190 (52.63%), Query Frame = 1
Query:   85 SEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGH-----DFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKP 639
            S+  I+  + D+  AG++TTA    W +A L+ NP V++K Q+E+D+ IGF R  T  D ++L  L+A  +E LR+ P  P+++PHRAN+++ IG + +PK + + +N+WA+      W  P            +D  G          LPFGAG R C G  L    +   + HLL  F    P+  +P
Sbjct:  288 SDMHILATIADIFGAGIETTASVLSWIIAFLLHNPEVKKKIQKEIDQNIGFSRTPTFNDRNHLLMLEATIREVLRIRPVAPMLIPHRANSDMSIGEFSIPKFTPVIINLWALHHSEKEWDQP----DRFMPERFLDPTGSHLITPSLSYLPFGAGARSCIGEVLARQELFLFMAHLLQRFDLDVPDDEQP 473          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP17A_ORYLA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzias latipes GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.049e-24
Identity = 62/186 (33.33%), Postives = 98/186 (52.69%), Query Frame = 1
Query:   70 EKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDP-LXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPP 624
            E   LS+D ++  + D+  AG++TT    +W +  LI  P VQ++ QEELDR +G +R    +D  +LP+L+A  +E LR+ P  PL++PH A ++  +G + V KG+ + +N+W++  D   W +P L             +       LPFGAG RVC G  L    +   L  +L  F  + P
Sbjct:  292 EAVGLSDDHLLMTVGDIFGAGVETTTTVLKWAITYLIHYPEVQKQIQEELDRKVGVDRPPQLSDRGSLPFLEATIREVLRIRPVAPLLIPHVALSDTSLGDFTVRKGTRVVINLWSLHHDEKEWTNPDLFNPGRFLSADGSSLTLPSSSYLPFGAGLRVCLGEALAKMELFLFLSWILQRFTLSVP 477          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP17A_CHICK (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus gallus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.370e-24
Identity = 65/193 (33.68%), Postives = 100/193 (51.81%), Query Frame = 1
Query:   64 LQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFR-----LLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPE 627
            L+   +L++D ++  + D+  AG++TT    +W +  L+  P VQ+K QEE+D+ IG  R    +D   LPYL+A   E LR+ P +PL++PH + A+  IG Y +PKG+ + +N+W+V  D   W  P            +D +G          LPFGAG RVC G  L    +   L  +L  F    P+
Sbjct:  284 LEPGLELTDDHLLMTVGDIFGAGVETTTTVLKWAVLYLLHYPEVQKKIQEEMDQKIGLARHPHLSDRPLLPYLEATISEGLRIRPVSPLLIPHVSLADTSIGEYSIPKGARVVINLWSVHHDEKEWDKP----EEFNPGRFLDEQGQHIHSPSPSYLPFGAGIRVCLGEVLAKMELFLFLAWVLQRFTLECPQ 472          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP1A1_RAT (Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.337e-24
Identity = 68/209 (32.54%), Postives = 99/209 (47.37%), Query Frame = 1
Query:   49 DALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGH-DFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 672
            D  L       LS+D +I +++D+  AG DT   +  W +  L+ NPR+Q+K QEELD VIG +R    +D   LPYL+A   E  R     P  +PH    +  + G+ +PKG  + VN W V  D  +W DP              +  H   +++ FG G+R C G  +G   V   L  LL    +    G   E++DM+   GL
Sbjct:  295 DRRLDENANVQLSDDKVITIVFDLFGAGFDTITTAISWSLMYLVTNPRIQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTIRDTSLNGFYIPKGHCVFVNQWQVNHDQELWGDPNEFRPERFLTSSGTLDKHLSEKVILFGLGKRKCIGETIGRLEVFLFLAILLQQMEFNVSPG---EKVDMTPAYGL 500          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP1A1_MOUSE (Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.337e-24
Identity = 69/209 (33.01%), Postives = 98/209 (46.89%), Query Frame = 1
Query:   49 DALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDM-KGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 672
            D  L       LS+D +I ++ D+  AG DT   +  W +  L+ NPRVQ+K QEELD VIG +R    +D   LPYL+A   E  R     P  +PH    +  + G+ +PKG  + VN W V  D  +W DP              + K    ++  FG G+R C G  +G + V   L  LL    +    G   E++DM+   GL
Sbjct:  295 DRKLDENANVQLSDDKVITIVLDLFGAGFDTVTTAISWSLMYLVTNPRVQRKIQEELDTVIGRDRQPRLSDRPQLPYLEAFILETFRHSSFVPFTIPHSTTRDTSLNGFYIPKGCCVFVNQWQVNHDRELWGDPNEFRPERFLTPSGTLDKRLSEKVTLFGLGKRKCIGETIGRSEVFLFLAILLQQIEFKVSPG---EKVDMTPTYGL 500          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP1A1_RABIT (Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.052e-24
Identity = 72/225 (32.00%), Postives = 106/225 (47.11%), Query Frame = 1
Query:   37 HYFVDALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDP--LXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTFMKTPVHAV 705
            HY VD L        +S++  +G++ D+  AG DT   +  W +  L+  PR+Q+K QEELD V+G  R    +D   LPYL+AV  E  R     P  +PH    +  +GG+ +PKG  + VN W    DP +W DP              VD K    ++L FG G+R C G  +G   V   L  LL             ++++ S +PG    M TP++ +
Sbjct:  292 HYRVDRL-DENANVQVSDEKTVGIVLDLFGAGFDTVTTAISWSLMYLVTKPRIQRKIQEELDAVVGRARRPRFSDRPQLPYLEAVIMETFRHTSFLPFTIPHSTTRDTSLGGFYIPKGRCVFVNQWQNNHDPELWGDPEAFRPERFLTPSGAVD-KALTEKVLLFGLGKRKCIGETIGRLEVFLFLATLL-------------QQVEFSVSPGTTVDM-TPIYGL 500          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP17A_RANDY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana dybowskii GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.052e-24
Identity = 66/184 (35.87%), Postives = 94/184 (51.09%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDP-LXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEG 630
            L+ED I+  + D+  AG++TT+   +W +A L+  P VQ+K QEELD  +GF R    +D   L Y +A   E LR+ P +PL++PH A     IG Y +PK + + +N+W++  D   W +P L             +       LPFGAG RVC G  L    V   L  +L  F    PEG
Sbjct:  300 LTEDHILMTVGDIFGAGVETTSTVLKWAVAYLLHYPEVQKKIQEELDVKVGFGRYPLLSDRKILHYTEAAISEVLRIRPVSPLLIPHVALKESSIGEYTIPKEARVVINLWSLHHDEKEWVNPHLFSPDRFLDENGNRVYSPSPSFLPFGAGIRVCLGEALAKMEVFLFLSWILQRFTLEVPEG 483          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2DF_CANFA (Cytochrome P450 2D15 OS=Canis familiaris GN=CYP2D15 PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 5.206e-24
Identity = 72/239 (30.13%), Postives = 118/239 (49.37%), Query Frame = 1
Query:    4 HLLARRAVVPTHYFVDALLTLQEKY------DLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFR---LLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTFMKTP 693
            H   R    P  + +DA +   EK         +E+ +  +  D+  AGM +T+I+  W +  +I +P VQ++ Q+E+D VIG E++    D + +P+  AV  E  R     PL +PH  + + ++ G+ +PKG+ +  N+ +V +D  VWK P            +D +GH  +    +PF AGRRVC G  L    +      LL  F+++ P G +P   D     G+ TF+K P
Sbjct:  261 HRKTRDPTQPPRHLIDAFVDEIEKAKGNPKTSFNEENLCMVTSDLFIAGMVSTSITLTWALLLMILHPDVQRRVQQEIDEVIGREQLPEMGDQTRMPFTVAVIHEVQRFGDIVPLGVPHMTSRDTEVQGFLIPKGTTLITNLSSVLKDEKVWKKPFRFYPEHF----LDAQGHFVKHEAFMPFSAGRRVCLGEPLARMELFLFFTCLLQRFSFSVPAG-QPRPSD----HGVFTFLKVP 490          
The following BLAST results are available for this feature:
BLAST of CF835261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP2U1_BOVIN1.618e-2534.22Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 S... [more]
CP1A1_CAVPO2.114e-2534.76Cytochrome P450 1A1 OS=Cavia porcellus GN=CYP1A1 P... [more]
CP17A_MESAU8.032e-2533.68Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mesocr... [more]
CP17A_ORYLA1.049e-2433.33Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oryzia... [more]
CP17A_CHICK1.370e-2433.68Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus... [more]
CP1A1_RAT2.337e-2432.54Cytochrome P450 1A1 OS=Rattus norvegicus GN=Cyp1a1... [more]
CP1A1_MOUSE2.337e-2433.01Cytochrome P450 1A1 OS=Mus musculus GN=Cyp1a1 PE=1... [more]
CP1A1_RABIT3.052e-2432.00Cytochrome P450 1A1 OS=Oryctolagus cuniculus GN=CY... [more]
CP17A_RANDY3.052e-2435.87Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana d... [more]
CP2DF_CANFA5.206e-2430.13Cytochrome P450 2D15 OS=Canis familiaris GN=CYP2D1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835261 ID=CF835261; Name=CF835261; organism=Citrus sinensis; type=EST; length=711bp
ACACACTTGCTCGCCAGAAGAGCGGTGGTACCAACCCATTACTTTGTTGA
TGCTTTGCTTACACTGCAAGAAAAATATGACCTAAGTGAAGACACTATCA
TTGGACTCCTCTGGGACATGATCACAGCGGGCATGGACACAACTGCAATC
TCAACAGAATGGGGAATGGCCGAGCTCATTAAGAACCCTAGAGTGCAACA
AAAGGCTCAAGAGGAACTAGACCGTGTGATAGGATTTGAACGTGTGATGA
CGGAAACCGATTTCTCAAACCTTCCTTACTTACAAGCTGTAGCCAAGGAG
GCTCTAAGGTTGCACCCACCAACTCCCCTGATGCTTCCTCACCGTGCCAA
TGCCAATGTTAAGATAGGTGGCTACGATGTTCCTAAGGGATCAAACATTC
ACGTCAACGTATGGGCAGTAGCTCGGGATCCTGCAGTCTGGAAGGACCCG
TTAGAGTTCCGGCCTGAGCGGTTCTTCGAGGAGGATGTGGACATGAAAGG
CCATGATTTTAGGCTACTACCATTTGGTGCTGGTAGGAGAGTGTGCCCAG
GTGCACAACTTGGTATAAATTTGGTCACGTCAATGTTGGGGCATCTATTA
CACCATTTTGCTTGGGCGCCACCAGAGGGAGTGAAGCCAGAGGAAATTGA
CATGTCAGAAAATCCTGGATTGGTTACATTTATGAAGACACCAGTACACG
CTGTGCCAACT
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