CF835261

Overview
NameCF835261
Unique NameCF835261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP17A_CAVPO (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia porcellus GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.515e-23
Identity = 62/191 (32.46%), Postives = 101/191 (52.88%), Query Frame = 1
Query:   67 QEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDP---LXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEG 630
            Q+    S+  I+  L D+  AG++T++    W +A L+ NP+V++K QEE+D  +GF R  T +D ++L  L+A  +E LR+ P  P+++PH+AN +  IG + + K +N+ VN+WA+  +   W  P   +           + +    +  LPFGAG R C G  L    +  +   LL  F    PEG
Sbjct:  282 QDSNLFSDKHILTTLGDIFGAGVETSSSVVLWVIAFLLHNPQVKKKIQEEIDHNVGFSRTPTFSDRNHLLMLEATIREVLRIRPVAPILIPHKANTDSSIGEFAIDKDTNVLVNLWALHHNEQEWDRPDQFMPERFLDPTGSQIIVPSSSY--LPFGAGPRSCVGEALARQEIFLITAWLLQKFDLEVPEG 470          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP1A1_LIMLI (Cytochrome P450 1A1 OS=Limanda limanda GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.978e-23
Identity = 60/210 (28.57%), Postives = 103/210 (49.05%), Query Frame = 1
Query:   49 DALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVD--MKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 672
            D  L       +S++ I+G++ D+  AG DT + +  W +  L+ +P +Q++  +E++  +G +R+   +D  NLP+L+A   E LR     P  +PH    +  + GY +PK + + +N W +  DP +WKDP           D     K    +++ FG G+R C G  +  N V   L  L+    + P  G   E++DM+   GL
Sbjct:  296 DRKLDENSNVQMSDEKIVGIVNDLFGAGFDTVSTALSWSVMYLVAHPEIQERLYQEIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFTIPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPEMWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAILIQKLHFLPIPG---EKLDMTPEYGL 502          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP17A_RAT (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus norvegicus GN=Cyp17a1 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.978e-23
Identity = 62/180 (34.44%), Postives = 94/180 (52.22%), Query Frame = 1
Query:   85 SEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDF-----RLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF 609
            S+  I+  + D+  AG++TT    +W +A L+ NP V++K Q+E+D+ +GF R  T  D S+L  L+A  +E LR+ P  P+++PH+AN +  IG + VPK +++ VN+WA+  D   W  P            +D  G          LPFGAG R C G  L    +      LL  F
Sbjct:  287 SDRHILATVGDIFGAGIETTTTVLKWILAFLVHNPEVKKKIQKEIDQYVGFSRTPTFNDRSHLLMLEATIREVLRIRPVAPMLIPHKANVDSSIGEFTVPKDTHVVVNLWALHHDENEWDQP----DQFMPERFLDPTGSHLITPTQSYLPFGAGPRSCIGEALARQELFVFTALLLQRF 462          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP17A_PERLE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromyscus leucopus GN=Cyp17a1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.584e-23
Identity = 62/195 (31.79%), Postives = 99/195 (50.77%), Query Frame = 1
Query:   61 TLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGH-----DFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEG 630
            T   +   S+  I+  + D   AG++TT     W +A L+ NP V++K Q+E+D+ IGF R  T  D ++L  L+A  +E LR+ P  P+++PH+AN +  IG + +PK +++ +N+WA+  +   W  P            +D  G          LPFGAG R C G  L   ++   +  LL  F    P+G
Sbjct:  278 TTDHQGSFSDSHILSTVGDFFGAGIETTTSVLCWIVAFLLHNPEVKKKIQKEIDQNIGFSRTPTFNDRNHLLMLEATIREVLRIRPVAPMLIPHKANIDSSIGEFTIPKDTHVVINLWALHHNEKEWDQP----DRFMPERFLDATGSHLITPSLSYLPFGAGPRACIGEVLARQVLFLYVACLLQRFDLDVPDG 468          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP1A1_PLEPL (Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.375e-23
Identity = 59/210 (28.10%), Postives = 103/210 (49.05%), Query Frame = 1
Query:   49 DALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVD--MKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 672
            D  L       +S++ I+G++ D+  AG DT + +  W +  L+ +P +Q++  +E++  +G +R+   +D  NLP+L+A   E LR     P  +PH    +  + GY +PK + + +N W +  DP +WKDP           D     K    +++ FG G+R C G  +  N V   L  ++    + P  G   E++DM+   GL
Sbjct:  296 DRKLDENSNVQMSDEKIVGIVNDLFGAGFDTVSTALSWSVMYLVAHPEIQERLYQEIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFTIPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIIIQKLHFLPIPG---EKLDMTPEYGL 502          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP1A1_PLAFE (Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a1 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.375e-23
Identity = 59/210 (28.10%), Postives = 103/210 (49.05%), Query Frame = 1
Query:   49 DALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVD--MKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 672
            D  L       +S++ I+G++ D+  AG DT + +  W +  L+ +P +Q++  +E++  +G +R+   +D  NLP+L+A   E LR     P  +PH    +  + GY +PK + + +N W +  DP +WKDP           D     K    +++ FG G+R C G  +  N V   L  ++    + P  G   E++DM+   GL
Sbjct:  296 DRKLDENSNVQMSDEKIVGIVNDLFGAGFDTVSTALSWSVMYLVAHPEIQERLYQEIEDKVGLDRMPLLSDKPNLPFLEAFILEILRHSSFLPFTIPHCTTKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLSADGSEVNKLDGEKVMAFGMGKRRCIGEVIARNEVYLFLAIIIQKLHFLPIPG---EKLDMTPEYGL 502          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP1A1_CANFA (Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.407e-23
Identity = 65/209 (31.10%), Postives = 98/209 (46.89%), Query Frame = 1
Query:   49 DALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDM-KGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGL 672
            D  L       LS++ I+ ++ D+  AG DT   +  W +  L+ NP VQ+K Q+ELD VIG  R    +D   LPY++A   E  R     P  +PH    +  + G+ +PKG  + VN W +  D  +W +P           D  + K    +++ FG G+R C G  +    V   L  LL    ++ PEG K   +DM+   GL
Sbjct:  295 DKRLDENANIQLSDEKIVNVVLDLFGAGFDTVTTAISWSLLYLVTNPNVQKKIQKELDTVIGRARQPRLSDRPQLPYMEAFILETFRHASFVPFTIPHSTTRDTSLSGFYIPKGRCVFVNQWQINHDQKLWGNPSEFQPERFLTLDGTINKALSEKVILFGLGKRKCIGETIARLEVFLFLAILLQQVEFSVPEGTK---VDMTPIYGL 500          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP17A_PAPHU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio hamadryas ursinus GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23
Identity = 64/205 (31.22%), Postives = 106/205 (51.71%), Query Frame = 1
Query:   67 QEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDP-LXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF-AWAPPEGVKPEEIDMSENPGLV 675
            Q+   LS++ I+  + D+  AG++TT    +W +A L+ NP+V++K  E +D+ +GF R  T +D + L  L+A  +E LR+ P  P+++PH+AN +  IG + V KG+++ +N+WA+  +   W  P               +       LPFGAG R C G  L    +  ++  LL  F    P +G  P    +  NP +V
Sbjct:  282 QDSELLSDNHILTTIGDIFGAGVETTTSVVKWIVAFLLHNPQVKKKLYEGIDQNVGFSRTPTISDRNRLLLLEATIREVLRIRPVAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLP---SLEGNPKVV 483          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2K1_ONCMY (Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2k1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23
Identity = 66/213 (30.99%), Postives = 106/213 (49.77%), Query Frame = 1
Query:   43 FVDALL----TLQEKYDLS----EDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 657
            FVD+ L    TL+E   +     +D ++  + ++ +AG DTT  +  WG+  + K P +Q + QEE+ RVIG  + + E D  NLPY  AV  E  RL    P+ +PH  + +V   GY + KG+++   + +V +D + W+ P                  D   + F AGRRVC G  L    +      LL  F ++PP GV  +++D++
Sbjct:  274 FVDSFLVRKQTLEESGHMDSFYHDDNLVFSVGNLFSAGTDTTGTTLRWGLLLMTKYPHIQDQVQEEISRVIGSRQTLVE-DRKNLPYTDAVIHETQRLANIVPMSVPHTTSRDVTFQGYFIKKGTSVIPLLTSVLQDDSEWESPNTFNPSHFLDEQGGFVKRD-AFMAFSAGRRVCLGEGLARMELFLFFTSLLQRFRFSPPPGVTEDDLDLT 484          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2DA_RAT (Cytochrome P450 2D10 OS=Rattus norvegicus GN=Cyp2d10 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.518e-23
Identity = 64/206 (31.07%), Postives = 102/206 (49.51%), Query Frame = 1
Query:   31 PTHYFVDALLTLQEKY------DLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEG 630
            P     DA L   EK         +++ +  ++ D+ TAGM TTA +  W +  +I  P VQ++ Q+E+D VIG  R    TD +++PY  AV  E  R     PL LP   + ++++  + +PKG+ + +N+ +V +D  VW+ PL            +   H+   +PF AGRR C G  L    +      LL HF+++ P G
Sbjct:  270 PPRNLTDAFLAEVEKAKGNPESSFNDENLRMVVVDLFTAGMVTTATTLTWALLLMILYPDVQRRVQQEIDEVIGQVRCPEMTDQAHMPYTNAVIHEVQRFGDIAPLNLPRITSCDIEVQDFVIPKGTTLIINLSSVLKDETVWEKPLRFHPEHFLDAQGNFVKHE-AFMPFSAGRRACLGEPLARMELFLFFTCLLQHFSFSVPAG 474          
The following BLAST results are available for this feature:
BLAST of CF835261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP17A_CAVPO1.515e-2332.46Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia ... [more]
CP1A1_LIMLI1.978e-2328.57Cytochrome P450 1A1 OS=Limanda limanda GN=cyp1a1 P... [more]
CP17A_RAT1.978e-2334.44Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus... [more]
CP17A_PERLE2.584e-2331.79Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromy... [more]
CP1A1_PLEPL3.375e-2328.10Cytochrome P450 1A1 OS=Pleuronectes platessa GN=cy... [more]
CP1A1_PLAFE3.375e-2328.10Cytochrome P450 1A1 OS=Platichthys flesus GN=cyp1a... [more]
CP1A1_CANFA4.407e-2331.10Cytochrome P450 1A1 OS=Canis familiaris GN=CYP1A1 ... [more]
CP17A_PAPHU5.756e-2331.22Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio ... [more]
CP2K1_ONCMY7.518e-2330.99Cytochrome P450 2K1 OS=Oncorhynchus mykiss GN=cyp2... [more]
CP2DA_RAT7.518e-2331.07Cytochrome P450 2D10 OS=Rattus norvegicus GN=Cyp2d... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835261 ID=CF835261; Name=CF835261; organism=Citrus sinensis; type=EST; length=711bp
ACACACTTGCTCGCCAGAAGAGCGGTGGTACCAACCCATTACTTTGTTGA
TGCTTTGCTTACACTGCAAGAAAAATATGACCTAAGTGAAGACACTATCA
TTGGACTCCTCTGGGACATGATCACAGCGGGCATGGACACAACTGCAATC
TCAACAGAATGGGGAATGGCCGAGCTCATTAAGAACCCTAGAGTGCAACA
AAAGGCTCAAGAGGAACTAGACCGTGTGATAGGATTTGAACGTGTGATGA
CGGAAACCGATTTCTCAAACCTTCCTTACTTACAAGCTGTAGCCAAGGAG
GCTCTAAGGTTGCACCCACCAACTCCCCTGATGCTTCCTCACCGTGCCAA
TGCCAATGTTAAGATAGGTGGCTACGATGTTCCTAAGGGATCAAACATTC
ACGTCAACGTATGGGCAGTAGCTCGGGATCCTGCAGTCTGGAAGGACCCG
TTAGAGTTCCGGCCTGAGCGGTTCTTCGAGGAGGATGTGGACATGAAAGG
CCATGATTTTAGGCTACTACCATTTGGTGCTGGTAGGAGAGTGTGCCCAG
GTGCACAACTTGGTATAAATTTGGTCACGTCAATGTTGGGGCATCTATTA
CACCATTTTGCTTGGGCGCCACCAGAGGGAGTGAAGCCAGAGGAAATTGA
CATGTCAGAAAATCCTGGATTGGTTACATTTATGAAGACACCAGTACACG
CTGTGCCAACT
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