CF835261

Overview
NameCF835261
Unique NameCF835261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14
Identity = 53/167 (31.74%), Postives = 81/167 (48.50%), Query Frame = 1
Query:  121 ITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            I AG +TT+ S  + M EL  +P VQQK QEE+D     + + T      + YL  V  E LRL+P     L      +V+I G  +PKG+ + V  + + RD ++W +P           + D   + +  LPFG G R C G +  I  +   L  +L +F++ P
Sbjct:  303 IFAGYETTSTSLSFLMYELATHPDVQQKLQEEIDATFPNKALPTYDALVQMEYLDMVLNETLRLYPIAG-RLERVCKKDVEISGVFIPKGTVVMVPTFTLHRDQSLWPEPEEFRPERFSRKNKD-SINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNFSFKP 467          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP240_MOUSE (Cytochrome P450 2C40 OS=Mus musculus GN=Cyp2c40 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14
Identity = 55/208 (26.44%), Postives = 96/208 (46.15%), Query Frame = 1
Query:   70 EKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTFMKTP 693
            E  D + + +  L+ D++  G +T + +  + +  L+K+  +  K QEE+D VIG  R     D +++PY  A+  E  R     P  + H    + K   Y + KG+ +  ++ +V  D   + +P           + + K  D+  +PF AG+R+C G  L    +   L  +L +F   P   V P++IDM+  P    F K P
Sbjct:  278 EHMDYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRNHMPYTNAMVHEVQRYIDLGPNGVVHEVTCDTKFRNYFILKGTQVMTSLTSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDY-FVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPL--VDPKDIDMT--PKHSGFSKIP 480          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP11A_DASAM (Cholesterol side-chain cleavage enzyme, mitochondrial (Fragment) OS=Dasyatis americana GN=CYP11A1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14
Identity = 54/197 (27.41%), Postives = 96/197 (48.73%), Query Frame = 1
Query:   37 HYFVDALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETD----FSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHD--FRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF 609
            H F   L  L  +  L  + I   + D+++  +DTT+ +  W M EL K+P +Q+  + E+          TE D      ++P L+ V KE LRL+ P  + +    N +  +  Y +P G+ + + ++A+ R+P ++K+P           +  +KG D  FR L FG G R C G ++    +  ++ H+L +F
Sbjct:  297 HAFPGVLTELLLQGALPFEDIRASIIDVMSGAIDTTSTTVHWMMYELAKHPHIQKNVRSEIMEA----HQKTEGDPVKMLKSVPLLKCVVKETLRLY-PVAISIQRYLNEDTVLQNYHIPAGTLVQLGLYAMGRNPKIFKNP------EQYNPERWLKGEDTHFRHLGFGFGPRQCIGRRIAETQMVLLMIHMLQNF 482          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CPXN_ANASP (Probable cytochrome P450 110 OS=Anabaena sp. (strain PCC 7120) GN=cyp110 PE=3 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14
Identity = 45/182 (24.73%), Postives = 91/182 (50.00%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPE 627
            ++++ +   L  ++ AG +TTA +  W   +++KN  VQ+K Q+ELDR+      M   + + LPYL AV++E LR++P  P + P    +++ I GY +   + +  +++ +     ++ +P            ++ +      +PFG G R C G  L +  +  ++  +L ++  A  E
Sbjct:  246 MTDEELKDELLTILFAGHETTATTIAWAFYQILKNVNVQEKLQQELDRLGANPNPM---EIAQLPYLTAVSQETLRMYPVLPTLFPRITKSSINIAGYQLEPDTTLMASIYLIHYREDLYPNPQQFRPERF----IERQYSPSEYIPFGGGSRRCLGYALALLEIKLVIATVLSNYQLALAE 420          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4X1_RAT (Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14
Identity = 48/177 (27.12%), Postives = 81/177 (45.76%), Query Frame = 1
Query:   43 FVDALLTLQ--EKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGI 567
            F+D +L+ Q  ++   S+  +   +   + AG D +A S  W +  L  NP  Q + + E+  ++G    +T      +PY     KE LRL PP P +    +       G+ +P G  + +++W +  +PAVWKDP           + + + H    LPF +G R C G Q  +
Sbjct:  284 FLDIVLSAQAGDEKAFSDADLRSEVNTFMWAGHDASAASISWLLYCLALNPEHQDRCRTEIRSILGDGSSITWEQLDEIPYTTMCIKETLRLIPPIPSISRELSKPLTLPDGHSLPAGMTVVLSIWGLHHNPAVWKDPKVFDPLRFTKENSEQR-HPCAFLPFSSGPRNCIGQQFAM 459          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4FC_HUMAN (Cytochrome P450 4F12 OS=Homo sapiens GN=CYP4F12 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14
Identity = 55/198 (27.78%), Postives = 90/198 (45.45%), Query Frame = 1
Query:   43 FVDALLTLQEKYD--LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFE--RVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHD-FRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            F+D LL  +++    LS++ I       +  G DTTA    W +  L ++P  Q++ ++E+  ++     + +   D + LP+L    KE+LRLHPP P +        V   G  +PKG    +++  V  +P VW DP             + KG      +PF AG R C G    +  +  +L  +L HF + P
Sbjct:  298 FIDVLLLSKDEDGKALSDEDIRAEADTFMFGGHDTTASGLSWVLYNLARHPEYQERCRQEVQELLKDRDPKEIEWDDLAQLPFLTMCVKESLRLHPPAPFISRCCTQDIVLPDGRVIPKGITCLIDIIGVHHNPTVWPDP--EVYDPFRFDPENSKGRSPLAFIPFSAGPRNCIGQAFAMAEMKVVLALMLLHFRFLP 493          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4AE_RAT (Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a14 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.740e-14
Identity = 51/195 (26.15%), Postives = 84/195 (43.08%), Query Frame = 1
Query:   43 FVDALL--TLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            F+D LL   +++   LS++ +   +   +  G DTTA    W    L  +P  Q++ +EE+  ++G    +T      +PY     KEALRL+PP P +    ++      G  +PKG    + ++ +  +P+ W +P             D   H    LPF  G R C G Q  +N +   +   L  F   P
Sbjct:  288 FLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQIPYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPNP---KVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLP 479          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4F6_RAT (Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14
Identity = 64/225 (28.44%), Postives = 103/225 (45.78%), Query Frame = 1
Query:   10 LARRAVVPTHYFVDALLTLQEKYD--LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTET---DFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGV---KPEEIDMSE 660
            L  RA   T  F+D LL  ++++   LS+  I       +  G DTTA +  W +  L ++P  Q++ ++E+  ++  +R   E    D + LP+L    KE+LRLHPP  L+    +   V   G  +PKG+   ++++ V  +P+VW DP           +   K      +PF AG R C G    ++ +   L   L  F   P +     KPE I  +E
Sbjct:  287 LKARAKTKTLDFIDVLLLAKDEHGKGLSDVDIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEVRELLR-DREPEEIEWDDLAQLPFLTMCIKESLRLHPPVLLISRCCSQDIVLPDGRVIPKGNICVISIFGVHHNPSVWPDP-EVYNPFRFDPENPQKRSPLAFIPFSAGPRNCIGQTFAMSEIKVALALTLLRFCVLPDDKEPRRKPELILRAE 509          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2G1_RAT (Cytochrome P450 2G1 OS=Rattus norvegicus GN=Cyp2g1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14
Identity = 50/181 (27.62%), Postives = 86/181 (47.51%), Query Frame = 1
Query:  115 DMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 657
            ++  AG +T + +  +G   L+K P V+ K  EE+++VIG  R     D + +PY  AV  E  RL    PL +PH    +    GY +PKG++++  + +V +DP  ++ P               K +D   + F +G+R+C G  L    +      +L  F+      V P +ID++
Sbjct:  297 NLFFAGTETVSSTLRYGFLLLMKYPEVEAKIHEEINQVIGTHRTPRVDDRAKMPYTDAVIHEIQRLTDIVPLGVPHNVIRDTHFRGYFLPKGTDVYPLIGSVLKDPKYFRYPEAFYPQHFLDEQGRFKKND-AFVAFSSGKRICVGEALARMELFLYFTSILQRFSLR--SLVPPADIDIA 474          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C4AA1_DROME (Probable cytochrome P450 4aa1 OS=Drosophila melanogaster GN=Cyp4aa1 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14
Identity = 51/197 (25.89%), Postives = 91/197 (46.19%), Query Frame = 1
Query:   46 VDALLTLQEKY-DLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVI-GFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEG 630
            +D ++ + E   D +E+ I+      + AG D+   +  + +  L +NP  Q +   EL  +     R  T TD   + Y++   KEALRL+P  PL +  +    V++  + +P GSN+ +  +A  R   ++ DP           + + + H +  LPF AG R C G +  I  + +++  LL  +   P  G
Sbjct:  284 LDHMIEISESNRDFTEEDIVNEACTFMLAGQDSVGAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAPTMTDLHEMRYMEMCIKEALRLYPSVPL-IARKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENR-HPYAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQLLPVTG 478          
The following BLAST results are available for this feature:
BLAST of CF835261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP3AC_CANFA2.863e-1431.74Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
CP240_MOUSE2.863e-1426.44Cytochrome P450 2C40 OS=Mus musculus GN=Cyp2c40 PE... [more]
CP11A_DASAM2.863e-1427.41Cholesterol side-chain cleavage enzyme, mitochondr... [more]
CPXN_ANASP3.740e-1424.73Probable cytochrome P450 110 OS=Anabaena sp. (stra... [more]
CP4X1_RAT3.740e-1427.12Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1... [more]
CP4FC_HUMAN3.740e-1427.78Cytochrome P450 4F12 OS=Homo sapiens GN=CYP4F12 PE... [more]
CP4AE_RAT3.740e-1426.15Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4F6_RAT4.884e-1428.44Cytochrome P450 4F6 OS=Rattus norvegicus GN=Cyp4f6... [more]
CP2G1_RAT4.884e-1427.62Cytochrome P450 2G1 OS=Rattus norvegicus GN=Cyp2g1... [more]
C4AA1_DROME4.884e-1425.89Probable cytochrome P450 4aa1 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835261 ID=CF835261; Name=CF835261; organism=Citrus sinensis; type=EST; length=711bp
ACACACTTGCTCGCCAGAAGAGCGGTGGTACCAACCCATTACTTTGTTGA
TGCTTTGCTTACACTGCAAGAAAAATATGACCTAAGTGAAGACACTATCA
TTGGACTCCTCTGGGACATGATCACAGCGGGCATGGACACAACTGCAATC
TCAACAGAATGGGGAATGGCCGAGCTCATTAAGAACCCTAGAGTGCAACA
AAAGGCTCAAGAGGAACTAGACCGTGTGATAGGATTTGAACGTGTGATGA
CGGAAACCGATTTCTCAAACCTTCCTTACTTACAAGCTGTAGCCAAGGAG
GCTCTAAGGTTGCACCCACCAACTCCCCTGATGCTTCCTCACCGTGCCAA
TGCCAATGTTAAGATAGGTGGCTACGATGTTCCTAAGGGATCAAACATTC
ACGTCAACGTATGGGCAGTAGCTCGGGATCCTGCAGTCTGGAAGGACCCG
TTAGAGTTCCGGCCTGAGCGGTTCTTCGAGGAGGATGTGGACATGAAAGG
CCATGATTTTAGGCTACTACCATTTGGTGCTGGTAGGAGAGTGTGCCCAG
GTGCACAACTTGGTATAAATTTGGTCACGTCAATGTTGGGGCATCTATTA
CACCATTTTGCTTGGGCGCCACCAGAGGGAGTGAAGCCAGAGGAAATTGA
CATGTCAGAAAATCCTGGATTGGTTACATTTATGAAGACACCAGTACACG
CTGTGCCAACT
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