CF835261

Overview
NameCF835261
Unique NameCF835261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C49A1_DROME (Probable cytochrome P450 49a1 OS=Drosophila melanogaster GN=Cyp49a1 PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 4.884e-14
Identity = 50/158 (31.65%), Postives = 75/158 (47.47%), Query Frame = 1
Query:  106 LLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGF-ERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKG--------HDFRLLPFGAGRRVCPG 552
            L  D+   G+DTT+++    + +L KNP  Q+K  +EL +V    E  + +     +PYL+A  KE LR+  P  +       ++  I GY VPKG+++      V+ DPA + +P             D  G        H F  LPFG GRR+C G
Sbjct:  382 LALDLFLVGVDTTSVAASSTIYQLAKNPDKQKKLFDELQKVFPHREADINQNVLEQMPYLRACVKETLRMR-PVVIANGRSLQSDAVINGYHVPKGTHVIFPHLVVSNDPAYFPEPKRFLPERWLKQSTDAAGCPHANQKIHPFVSLPFGFGRRMCVG 538          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4F5_RAT (Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 59/214 (27.57%), Postives = 101/214 (47.20%), Query Frame = 1
Query:   43 FVDALLTLQEKY--DLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTET---DFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGV---KPEEIDMSE 660
            F+D LL  ++++  +LS++ I       +  G DTTA +  W +  L ++P  Q++ ++E+  ++  +R   E    D + LP+L    KE+LRLHPP   +L       V   G  +PKG+   ++++ +  +P+VW DP           +   K      +PF AG R C G    +N +  ++   L  F   P +     KPE I  +E
Sbjct:  300 FIDVLLLAKDEHGKELSDEDIRAEADTFMFGGHDTTASALSWILYNLARHPEYQERCRQEVWELLR-DREPEEIEWDDLAQLPFLTMCIKESLRLHPPAIDLLRRCTQDIVLPDGRVIPKGNICVISIFGIHHNPSVWPDP-EVFDPFRFDSENRQKRSPLSFIPFSAGPRNCIGQTFAMNEMKVVVALTLLRFRVLPDDKEPRRKPEIILRAE 511          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4AE_MOUSE (Cytochrome P450 4A14 OS=Mus musculus GN=Cyp4a14 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 51/195 (26.15%), Postives = 84/195 (43.08%), Query Frame = 1
Query:   43 FVDALL--TLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            F+D LL   ++++  LS++ +   +   +  G DTTA    W    L  +P  QQ+ +EE+  ++G    +T      +PY     KEALRL+PP   +    ++      G  +PKG    ++++ +  +P  W +P             D   H    LPF  G R C G Q  +N +   +   L  F   P
Sbjct:  288 FLDILLFARMEDRNSLSDEDLRAEVDTFMFEGHDTTASGISWIFYALATHPEHQQRCREEVQSILGDGTSVTWDHLGQMPYTTMCIKEALRLYPPVISVSRELSSPVTFPDGRSIPKGITATISIYGLHHNPRFWPNPKVFDPSRFAP---DSSHHSHAYLPFSGGSRNCIGKQFAMNELKVAVALTLLRFELLP 479          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP1A2_CHICK (Cytochrome P450 1A2 (Fragment) OS=Gallus gallus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 41/121 (33.88%), Postives = 61/121 (50.41%), Query Frame = 1
Query:   91 DTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQE-ELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDP 450
            + II L+ D+  AG DT   +  W +  L+  P  Q+K QE ELD  IG ER    ++ S LPY +A   E +      P  +PH    +  + G+ +PK   + VN W V  +  +W+DP
Sbjct:   42 EKIINLVNDIFGAGFDTVTTALSWSLMYLVTQPHSQKKIQESELDTAIGRERRSWLSERSMLPYKEAFILETVPTWQFVPFTIPHSTTRDTTLNGFHIPKECCVFVNQWQVNHEAELWEDP 162          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C27C1_HUMAN (Cytochrome P450 27C1 OS=Homo sapiens GN=CYP27C1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 63/199 (31.66%), Postives = 98/199 (49.25%), Query Frame = 1
Query:   34 THYFVDALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANA---NVKIGGYDVPKGSNIHVNVWAVA-RDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPG---AQLGINLVTSMLGHLLHHF 609
            T+ F+   LTLQE Y          + +M+ AG+DTT+ +  W +  L ++P VQQ    E+ + +G   V T  D   +P ++A+ KE LRL P    +LP        ++ IGGY +PKG+ + +  +A + +D    +             D+D +  +F  +PFG G R C G   A+L I+LV      LL HF
Sbjct:  157 TYLFLSQALTLQEIY--------ANVTEMLLAGVDTTSFTLSWTVYILARHPEVQQTVYREIVKNLGERHVPTAADVPKVPLVRALLKETLRLFP----VLPGNGRVTQEDLVIGGYLIPKGTQLALCHYATSYQDENFPRAKEFRPERWLRKGDLD-RVDNFGSIPFGHGVRSCIGRRIAELEIHLVVI---QLLQHF 339          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4A2_RAT (Cytochrome P450 4A2 OS=Rattus norvegicus GN=Cyp4a2 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 57/221 (25.79%), Postives = 93/221 (42.08%), Query Frame = 1
Query:   43 FVDALL--TLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTFMKTPVH 699
            F+D LL   +++   LS++ +   +   +  G DTTA    W    L  +P  Q++ +EE+  ++G    +T      +PY     KEALRL+ P P +    ++      G  +PKG  + + ++ +  +P+ W +P             D   H    LPF  G R C G Q  +N +   +   L  F   P     P  I +   P LV   K  +H
Sbjct:  285 FLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQMPYTTMCIKEALRLYSPVPSVSRELSSPVTFPDGRSIPKGIRVTILIYGLHHNPSYWPNP---KVFDPSRFSPDSPRHSHAYLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLP----DPTRIPV-PMPRLVLKSKNGIH 497          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP24A_MOUSE (1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial OS=Mus musculus GN=Cyp24a1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 49/171 (28.65%), Postives = 84/171 (49.12%), Query Frame = 1
Query:   49 DALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQL 561
            D L  + ++  LS+  +   + ++  A ++TTA S  W +  L +NP+VQQ+   E+  V+   +     D  N+PYL+A  KE++RL P  P          V +G Y +PKG+ + +N   +      ++D            + + K + F  LPFG G+R+C G +L
Sbjct:  300 DFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQVQQRLLREIQSVLPDNQTPRAEDVRNMPYLKACLKESMRLTPSVPFTTRTLDKPTV-LGEYTLPKGTVLTLNTQVLGSSEDNFED--ADKFRPERWLEKEKKINPFAHLPFGVGKRMCIGRRL 467          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 50/179 (27.93%), Postives = 80/179 (44.69%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVW-KDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW 615
            L+   I+G     + AG DTTA+S  +    L  +P VQ+K QEE++R    E  ++    S L Y+  + KE LRL+P   +    R     K+G  +V  G+ + V+ W++  D  +W  D            + D        + FG G R C G +L       +L H+L  + +
Sbjct:  311 LTTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIEREC-IEPSISFDHLSKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKMLLAHILRKYTF 488          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4X1_HUMAN (Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 50/195 (25.64%), Postives = 87/195 (44.62%), Query Frame = 1
Query:   43 FVDALLTLQEKY--DLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            F+D +L+ +++     S+  +   +   + AG DT A S  W +  L  NP  Q++ +EE+  ++G    +T      + Y     KE  RL P  P +    +       G  +P G  + +++W +  +PAVWK+P           + D + H +  LPF AG R C G +  +  +   +  +L HF   P
Sbjct:  286 FLDIVLSAKDESGSSFSDIDVHSEVSTFLLAGHDTLAASISWILYCLALNPEHQERCREEVRGILGDGSSITWDQLGEMSYTTMCIKETCRLIPAVPSISRDLSKPLTFPDGCTLPAGITVVLSIWGLHHNPAVWKNPKVFDPLRFSQENSDQR-HPYAYLPFSAGSRNCIGQEFAMIELKVTIALILLHFRVTP 479          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4B1_RAT (Cytochrome P450 4B1 OS=Rattus norvegicus GN=Cyp4b1 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 56/221 (25.34%), Postives = 96/221 (43.44%), Query Frame = 1
Query:   43 FVDALLTLQEK--YDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTFMKTPVH 699
            F+D LL ++++    LS+  +   +   +  G DTT     W +  +   P  QQ  +EE+  ++G +      D + + YL    KE  RL+PP P +          + G  +P GS I ++++A+ R+  VW DP           +   + H F  +PF AG R C G Q  +N +  +    L  F ++      P ++     P L+   K  +H
Sbjct:  285 FLDILLGVRDESGIKLSDAELRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQQLCREEVRGILGDQDSFQWDDLAKMTYLTMCMKECFRLYPPVPQVYRQLNKPVTFVDGRSLPAGSLISLHIYALHRNSTVWPDPEVFDPLRFSPENAAGR-HPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSLDPSKMPIKV-----PQLILRSKNGIH 499          
The following BLAST results are available for this feature:
BLAST of CF835261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C49A1_DROME4.884e-1431.65Probable cytochrome P450 49a1 OS=Drosophila melano... [more]
CP4F5_RAT6.379e-1427.57Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5... [more]
CP4AE_MOUSE6.379e-1426.15Cytochrome P450 4A14 OS=Mus musculus GN=Cyp4a14 PE... [more]
CP1A2_CHICK6.379e-1433.88Cytochrome P450 1A2 (Fragment) OS=Gallus gallus GN... [more]
C27C1_HUMAN6.379e-1431.66Cytochrome P450 27C1 OS=Homo sapiens GN=CYP27C1 PE... [more]
CP4A2_RAT8.331e-1425.79Cytochrome P450 4A2 OS=Rattus norvegicus GN=Cyp4a2... [more]
CP24A_MOUSE8.331e-1428.651,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho... [more]
C13AA_CAEEL8.331e-1427.93Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
CP4X1_HUMAN1.088e-1325.64Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2... [more]
CP4B1_RAT1.088e-1325.34Cytochrome P450 4B1 OS=Rattus norvegicus GN=Cyp4b1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835261 ID=CF835261; Name=CF835261; organism=Citrus sinensis; type=EST; length=711bp
ACACACTTGCTCGCCAGAAGAGCGGTGGTACCAACCCATTACTTTGTTGA
TGCTTTGCTTACACTGCAAGAAAAATATGACCTAAGTGAAGACACTATCA
TTGGACTCCTCTGGGACATGATCACAGCGGGCATGGACACAACTGCAATC
TCAACAGAATGGGGAATGGCCGAGCTCATTAAGAACCCTAGAGTGCAACA
AAAGGCTCAAGAGGAACTAGACCGTGTGATAGGATTTGAACGTGTGATGA
CGGAAACCGATTTCTCAAACCTTCCTTACTTACAAGCTGTAGCCAAGGAG
GCTCTAAGGTTGCACCCACCAACTCCCCTGATGCTTCCTCACCGTGCCAA
TGCCAATGTTAAGATAGGTGGCTACGATGTTCCTAAGGGATCAAACATTC
ACGTCAACGTATGGGCAGTAGCTCGGGATCCTGCAGTCTGGAAGGACCCG
TTAGAGTTCCGGCCTGAGCGGTTCTTCGAGGAGGATGTGGACATGAAAGG
CCATGATTTTAGGCTACTACCATTTGGTGCTGGTAGGAGAGTGTGCCCAG
GTGCACAACTTGGTATAAATTTGGTCACGTCAATGTTGGGGCATCTATTA
CACCATTTTGCTTGGGCGCCACCAGAGGGAGTGAAGCCAGAGGAAATTGA
CATGTCAGAAAATCCTGGATTGGTTACATTTATGAAGACACCAGTACACG
CTGTGCCAACT
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