CF835261

Overview
NameCF835261
Unique NameCF835261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4AA_MOUSE (Cytochrome P450 4A10 OS=Mus musculus GN=Cyp4a10 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 51/195 (26.15%), Postives = 86/195 (44.10%), Query Frame = 1
Query:   43 FVDALL--TLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            F+D LL   ++    +S+  +   +   +  G DTTA    W    L  +P  QQ+ +EE+  ++G    +T      +PY     KEALRL+PP P ++   + +     G  +PKG  + ++++ +  +P VW +P             D   H    LPF  G R C G Q  ++ +  ++   L  F   P
Sbjct:  290 FLDILLFARMENGDSMSDKDLRAEVDTFMFEGHDTTASGVSWIFYALATHPDHQQRCREEVQSLLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGVQVTLSIYGLHHNPKVWPNP---EVFDPSRFAPDSPRHSHSFLPFSGGARNCIGKQFAMSELKVIVALTLLRFELLP 481          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2CD_RAT (Cytochrome P450 2C13, male-specific OS=Rattus norvegicus GN=Cyp2c13 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 48/168 (28.57%), Postives = 80/168 (47.62%), Query Frame = 1
Query:  106 LLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF 609
            ++ D+  AG++T + +  + +  L+K P V  K QEE+D VIG  R     D S++PY  A+  E  R     P  L H    + K   Y +PKG+ +  ++ +V  D   + +P           + + K  D+  +PF AG+R+C G  L    +   L  +L +F
Sbjct:  290 MVTDLFFAGIETVSSTMRFALLLLMKYPHVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTNAMVHEVQRYIDIGPNGLLHEVTCDTKFRNYFIPKGTAVLTSLTSVLHDSKEFPNPEMFDPGHFLDENGNFKKSDY-FIPFSAGKRMCLGESLARMELFLFLTTILQNF 456          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C4D20_DROME (Probable cytochrome P450 4d20 OS=Drosophila melanogaster GN=Cyp4d20 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 50/173 (28.90%), Postives = 86/173 (49.71%), Query Frame = 1
Query:  130 GMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERV--MTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP-PEGVKP 639
            G DTT+      +  + ++P VQQ+  EEL RV+G +    +T+    +L YL  V KE +RL+PP P +  H A   ++IG   +P  ++I++ ++   RD   + DPL          D +   + F  +PF AG + C G +  +  +  ++  +L  +   P  E +KP
Sbjct:  317 GDDTTSSGVSHALYAIARHPEVQQRIFEELQRVLGPDASAPVTQAQLQDLKYLDCVIKETMRLYPPVPAIGRH-AQKELEIGDKTIPANTSIYLVLYYAHRDANYFPDPL-SFRPERFLEDQEQGHNTFAYVPFSAGPKNCIGQKFAVLEMKVLISKVLRFYELLPLGEELKP 487          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C13A8_CAEEL (Putative cytochrome P450 CYP13A8 OS=Caenorhabditis elegans GN=cyp-13A8 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 52/178 (29.21%), Postives = 80/178 (44.94%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW 615
            L+   II   +  + AG DTTAIS  +    L  NP++Q K Q+E+D+    + + T    S L Y+  V KE+LRL P        R   N  IG   V  G ++ ++ W +  D  VW + +           +  +      L FGAG RVC G +  +     +L H+L  + +
Sbjct:  305 LTTQEIISQCFVFLVAGFDTTAISLSYVTYFLALNPKIQSKLQDEVDKECPNDEI-TFDQLSKLKYMDNVIKESLRLFPFASFANSRRCMRNTVIGEQIVEAGVDVMIDTWTLHHDKNVWGNDVEEFKPERWDSPLTPQQ---AYLSFGAGPRVCLGMRFALLEQKGLLSHILKKYTF 478          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP11A_HORSE (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Equus caballus GN=CYP11A1 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 49/165 (29.70%), Postives = 85/165 (51.52%), Query Frame = 1
Query:  115 DMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF 609
            +M+  G+DTT++S +W + E+ +N RVQ+  +EE+       +  T T    +P L+A  KE LRLHP    +  +  N ++ I  Y +P  + + V+++ + +DP  + +P           + D+    FR L FG G R C G ++    +T  L H+L +F
Sbjct:  321 EMLAGGVDTTSMSLQWHLYEIARNLRVQEMLREEVLAARRQAQGDTSTMVQMVPLLKASIKETLRLHPIAVTLQRYPQN-DLVIRDYMIPAKTLVQVSIYTMGQDPTFFSNPRRFDPTRWLDKNKDLT--HFRNLGFGWGVRQCLGRRIAELEMTLFLIHILENF 482          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C94A1_VICSA (Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 51/208 (24.52%), Postives = 93/208 (44.71%), Query Frame = 1
Query:   88 EDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKG-------HDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTFMKT 690
            ED +  ++   I AG DTT+ +  W    L KNPRV+++   EL +      +M   +   + Y  A   E++RL+PP P+      N +V   G+ V KG+ +  +V+A+ R  ++W D              ++ G         +    F AG RVC G ++    +  ++  ++  F   P       E  +++ PG ++F+ +
Sbjct:  302 EDFVADIVISFILAGKDTTSAALTWFFWLLWKNPRVEEEIVNELSKK---SELMVYDEVKEMVYTHAALSESMRLYPPVPMDSKEAVNDDVLPDGWVVKKGTIVTYHVYAMGRMKSLWGDDWAEFRPERWLEKDEVNGKWVFVGRDSYSYPVFQAGPRVCLGKEMAFMQMKRIVAGIVGKFKVVP-------EAHLAQEPGFISFLSS 499          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C513F_DICDI (Probable cytochrome P450 513F1 OS=Dictyostelium discoideum GN=cyp513f1 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 48/198 (24.24%), Postives = 95/198 (47.98%), Query Frame = 1
Query:   46 VDALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKP 639
            V+A L      ++  ++++    +++ AG D++A +  + +  LI NP +Q+K   E+   +  + +     F   PY  AV KE  RL+   PL  PH  + +V+I G+ + KG+ I  N+++ +R    W  PL          + ++K  +  ++ FG G R C G      ++   +  L+ ++ ++ P   +P
Sbjct:  285 VEAYLENYLNGEIKFESVLSSCTNLLLAGTDSSANTLSFLLVSLINNPEIQEKVYNEIITNLKNDEISINDRFK-CPYTCAVIKETHRLYSIAPLSEPHYCSNDVEIKGFKIAKGTQIIQNIYSSSRSEQYWDKPL-SFIPERFIDNANIKEKNKNIVSFGLGLRGCIGKSFAEYMIFLTVVRLIKNYKFSNPSPNQP 480          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C11B1_HUMAN (Cytochrome P450 11B1, mitochondrial OS=Homo sapiens GN=CYP11B1 PE=1 SV=5)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 51/176 (28.98%), Postives = 85/176 (48.30%), Query Frame = 1
Query:   79 DLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHH 606
            +LS D I     ++    +DTT       + EL +NP VQQ  ++E            +   + LP L+A  KE LRL+P   L L   A++++ +  Y +P G+ + V ++++ R+PA++  P           D+   G +F  +PFG G R C G +L    +  +L H+L H
Sbjct:  298 ELSPDAIKANSMELTAGSVDTTVFPLLMTLFELARNPNVQQALRQESLAAAASISEHPQKATTELPLLRAALKETLRLYP-VGLFLERVASSDLVLQNYHIPAGTLVRVFLYSLGRNPALFPRP--ERYNPQRWLDIRGSGRNFYHVPFGFGMRQCLGRRLAEAEMLLLLHHVLKH 470          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4B1_RABIT (Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CYP4B1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 57/221 (25.79%), Postives = 99/221 (44.80%), Query Frame = 1
Query:   43 FVDALLTLQEK--YDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTFMKTPVH 699
            F+D LL ++ +    LS+  +   +   +  G DTT     W +  +   P  QQ+ +EE+  ++G +      D + + YL    KE  RL+PP P +    +     + G  +P GS I ++++A+ R+  VW DP           +   + H +  +PF AG R C G Q  +N +  +    L  F ++    V P  + + + P LV   K  +H
Sbjct:  280 FLDILLDVRGESGVQLSDTDLRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQQRCREEVREILGDQDSFQWEDLAKMTYLTMCMKECFRLYPPVPQVYRQLSKPVSFVDGRSLPAGSLISLHIYALHRNSDVWPDPEVFDPLRFSPENSSGR-HPYAFIPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFS----VDPLRLPI-KLPQLVLRSKNGIH 494          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 54/180 (30.00%), Postives = 84/180 (46.67%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            LS + ++      I AG +TT+ +      EL  +P VQQK QEE++     +   T    + + YL  V  E LRL+ P    L      +V+I G  VPKG+ + V V+ + RDP +W +P             D   + +  LPFG G R C G +  +  +   L  +L +F++ P
Sbjct:  290 LSNEELVAQGIIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLY-PIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLWPEPEEFRPERFSKKHKDTI-NPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFKP 467          
The following BLAST results are available for this feature:
BLAST of CF835261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP4AA_MOUSE1.088e-1326.15Cytochrome P450 4A10 OS=Mus musculus GN=Cyp4a10 PE... [more]
CP2CD_RAT1.088e-1328.57Cytochrome P450 2C13, male-specific OS=Rattus norv... [more]
C4D20_DROME1.088e-1328.90Probable cytochrome P450 4d20 OS=Drosophila melano... [more]
C13A8_CAEEL1.088e-1329.21Putative cytochrome P450 CYP13A8 OS=Caenorhabditis... [more]
CP11A_HORSE1.421e-1329.70Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C94A1_VICSA1.421e-1324.52Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE... [more]
C513F_DICDI1.421e-1324.24Probable cytochrome P450 513F1 OS=Dictyostelium di... [more]
C11B1_HUMAN1.421e-1328.98Cytochrome P450 11B1, mitochondrial OS=Homo sapien... [more]
CP4B1_RABIT1.856e-1325.79Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CY... [more]
CP3AT_PIG1.856e-1330.00Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835261 ID=CF835261; Name=CF835261; organism=Citrus sinensis; type=EST; length=711bp
ACACACTTGCTCGCCAGAAGAGCGGTGGTACCAACCCATTACTTTGTTGA
TGCTTTGCTTACACTGCAAGAAAAATATGACCTAAGTGAAGACACTATCA
TTGGACTCCTCTGGGACATGATCACAGCGGGCATGGACACAACTGCAATC
TCAACAGAATGGGGAATGGCCGAGCTCATTAAGAACCCTAGAGTGCAACA
AAAGGCTCAAGAGGAACTAGACCGTGTGATAGGATTTGAACGTGTGATGA
CGGAAACCGATTTCTCAAACCTTCCTTACTTACAAGCTGTAGCCAAGGAG
GCTCTAAGGTTGCACCCACCAACTCCCCTGATGCTTCCTCACCGTGCCAA
TGCCAATGTTAAGATAGGTGGCTACGATGTTCCTAAGGGATCAAACATTC
ACGTCAACGTATGGGCAGTAGCTCGGGATCCTGCAGTCTGGAAGGACCCG
TTAGAGTTCCGGCCTGAGCGGTTCTTCGAGGAGGATGTGGACATGAAAGG
CCATGATTTTAGGCTACTACCATTTGGTGCTGGTAGGAGAGTGTGCCCAG
GTGCACAACTTGGTATAAATTTGGTCACGTCAATGTTGGGGCATCTATTA
CACCATTTTGCTTGGGCGCCACCAGAGGGAGTGAAGCCAGAGGAAATTGA
CATGTCAGAAAATCCTGGATTGGTTACATTTATGAAGACACCAGTACACG
CTGTGCCAACT
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