CF835261

Overview
NameCF835261
Unique NameCF835261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP3AO_SHEEP (Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 51/180 (28.33%), Postives = 86/180 (47.78%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            LS+  ++      I AG +TT+ +  + +  L  +P VQQK QEE+D     +   T    + + YL  V  E LR+  P  + L      +V+I G  +PKG+ + V ++ + RDP +W +P           + D   + +  LPFG G R C G +  I  +   +  +L +F++ P
Sbjct:  290 LSDQELMAQSVIFIFAGYETTSNTLSFLLYILATHPDVQQKLQEEIDATFPNKAPPTYDVLAQMEYLDMVVNETLRMF-PIAVRLDRLCKKDVEIHGVSIPKGTAVTVPIFVLHRDPQLWPEPEEFRPERFSKKNKD-SINPYVYLPFGTGPRNCIGMRFAIMNMKLAIVRVLQNFSFKP 467          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2BA_MOUSE (Cytochrome P450 2B10 OS=Mus musculus GN=Cyp2b10 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 53/220 (24.09%), Postives = 101/220 (45.91%), Query Frame = 1
Query:   43 FVDALLTLQEKYDLSEDT------IIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPF---------GAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 657
            F+D  L   EK   +++       ++  +  +   G +T++ +  +G   ++K P V +K Q+E+D+VIG  R+ T  D + +PY  AV  E  R     P+ +PHR   +    GY +PK + ++  + +   DP  ++ P           +  +K  +   LPF           G+R+C G  +  + +      +L +F+ A    V P++ID++
Sbjct:  264 FIDIYLLRMEKEKSNQNAEFHHQNLMMSVLSLFFVGTETSSTTLHYGFLLMLKYPHVTEKVQKEIDQVIGSHRLPTLDDRTKMPYSDAVIHEIQRFSDLIPIGVPHRVTKDTLFRGYLLPKNTEVYPILSSALHDPQYFEQPDSFNPDQFLDANGALKKSE-AFLPFSTGQIFDQKSVGKRICLGESIARSELFLFFTSILQNFSVA--SHVAPKDIDLT 480          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP11B_RANCA (Cytochrome P450 11B, mitochondrial OS=Rana catesbeiana GN=CYP11B PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 54/208 (25.96%), Postives = 101/208 (48.56%), Query Frame = 1
Query:   79 DLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEID-------MSENPGLVTF 681
            +L  D+I   + +++  G+DTTA+   + + EL +NP VQ++ +EE+ +             ++LP L+   KE LRL+ P  + +      ++ +  Y +P G+ + V ++ + R P +++D L           +  +  +F+ L FG G R C G ++    +T  L H+L +F     + V  ++I        M E P L+TF
Sbjct:  315 ELPLDSIKANITELMAGGVDTTAMPLLFTLFELARNPSVQRELREEIRKAEAQNPNDLNQLLNSLPLLKGAIKETLRLY-PVGITVQRHLIKDIVLHNYHIPAGTLVQVGLYPMGRSPLLFQDALRYDPARW----LKREDTNFKALAFGFGSRQCIGRRIAETEITLFLMHMLKNF---QIDTVSKDDIKTVFGFILMPEKPPLLTF 514          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C513D_DICDI (Probable cytochrome P450 513D1 OS=Dictyostelium discoideum GN=cyp513d1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 55/209 (26.32%), Postives = 93/209 (44.50%), Query Frame = 1
Query:   55 LLTLQEKYDLSE---DTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFE---RVMTETDFSN-------------LPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPP 624
            L +L ++Y L++   D +IG L D+I AG DTT  +  + +  L+ N  +Q+K   E+      +    +    D SN              PYL A  KE  R +P  PL +PH    + +I GY + KG+ +  N+++     +   +PL            + K     ++ FG G+R CPG  +    +   L +L+  F ++ P
Sbjct:  287 LESLLKQYRLNKIPYDGVIGCLMDLILAGSDTTGNTCLFSLVALVNNSNIQEKLFNEISNAFNDDDGDELNGANDISNSLLKLSYFSDRIKTPYLVAFIKEVKRYYPCAPLSVPHLLTEDCEIQGYKIAKGTQVIQNIYSTHLSQSFCSNPLEFSPERFLDSTNEPK-----IITFGIGQRKCPGENIFEIEIYIFLVYLIKKFKFSHP 490          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C340_ORYLA (Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 56/198 (28.28%), Postives = 91/198 (45.96%), Query Frame = 1
Query:   64 LQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP-PEGVKPEEIDM 654
            LQ+K  LS+  I+      I AG +TT+ S  +    L  NP V +K Q+E+D     +  +       + YL  V  E+LRL+ P    L   A A V++ G  +PK   + V  W + RDP +W +P           + D     +  +PFGAG R C G +  + ++   +  +L  + ++   E   P E+D+
Sbjct:  286 LQDK-GLSDHEILSQAMIFIFAGYETTSSSLTFLAYNLATNPEVMKKLQKEIDATFPNKAPVQYVPLMEMEYLDCVVNESLRLY-PIAARLERVAKATVEVNGLVIPKDMVVMVPTWPLHRDPELWPEPEKFKPERFSKENKD-TFDPYTYMPFGAGPRNCIGMRFALVMMKLAVVEILQTYDFSVCKETEVPFEMDV 480          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2A9_MESAU (Cytochrome P450 2A9 OS=Mesocricetus auratus GN=CYP2A9 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 60/214 (28.04%), Postives = 96/214 (44.86%), Query Frame = 1
Query:   43 FVDALLTL---QEKYDLSEDTIIGLLW---DMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENP 666
            F+D+ L     ++K   SE  I  L+    ++  AG +T + +  +G   L+K P V+ K  EE+DRVIG  R     D   +PY +AV  E  R     PL +P +   N    G+ +PK ++++  + ++  DP  +  P              +K      +PF  G+R C G  L    +   L  +L +F    P+  K E+ID S  P
Sbjct:  266 FIDSFLIHMHEEKKNPTSEFNIKNLVMTSLNLFFAGSETVSSTIRYGFLLLMKYPEVEAKVHEEIDRVIGRNRQPQFEDRMKMPYTEAVINEIQRFANLAPLGIPRKTIKNTTFRGFFLPKDTDVYPILGSLLTDPKFFTSPKHFNPQNFLDDRGQLK-KIAAFVPFSVGKRFCLGDGLARMELFLFLTTILQNFRLKFPK--KLEDIDASPKP 476          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2A2_RAT (Cytochrome P450 2A2 OS=Rattus norvegicus GN=Cyp2a2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 59/220 (26.82%), Postives = 101/220 (45.91%), Query Frame = 1
Query:   43 FVDALLTL--QEKYDLSEDTIIGLLWD---MITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTFMK 687
            F+D+ L    +EKY  SE  +  L+     ++ AG  + + +   G   L+K+P V+ K  EE++RVIG  R     D   +PY QAV  E  R     PL +P R   N    G+ +PKG+++   + ++  +P  + +               +K  +   LPF  G+R C G  L    +  +L  +L +F +  P  ++    D++E P  + F +
Sbjct:  266 FIDSFLIRMQEEKYVNSEFHMNNLVMSSLGLLFAGTGSVSSTLYHGFLLLMKHPDVEAKVHEEIERVIGRNRQPQYEDHMKMPYTQAVINEIQRFSNLAPLGIPRRIIKNTTFRGFFLPKGTDVFPIIGSLMTEPKFFPNHKDFNPQHFLDDKGQLK-KNAAFLPFSIGKRFCLGDSLAKMELFLLLTTILQNFRFKFPMNLE----DINEYPSPIGFTR 480          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C4D21_DROME (Probable cytochrome P450 4d21 OS=Drosophila melanogaster GN=Cyp4d21 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 48/169 (28.40%), Postives = 79/169 (46.75%), Query Frame = 1
Query:  121 ITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFE--RVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            I AG DTT       +  + ++P+VQ+   EEL  V+G +    +T+T    L YL  V KE +RLHPP P+ L      ++KIG   +P  ++I +  + V RDP  + DPL                     +PF +G + C G +     + +++  ++ H+   P
Sbjct:  314 IFAGDDTTTSGVSHALHAISRHPKVQECIYEELVSVLGPDPDASVTQTKLLELKYLDCVIKETMRLHPPVPI-LGRYIPEDLKIGEITIPGNTSILLMPYYVYRDPEYFPDPLVFKPERWMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHYELLP 481          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C11B2_HUMAN (Cytochrome P450 11B2, mitochondrial OS=Homo sapiens GN=CYP11B2 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.424e-13
Identity = 55/193 (28.50%), Postives = 91/193 (47.15%), Query Frame = 1
Query:   31 PTHYFVDALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF 609
            P HY    +  L  K +LS + I     ++    +DTTA      + EL +NP VQQ  ++E            +   + LP L+A  KE LRL+P   L L    ++++ +  Y +P G+ + V ++++ R+ A++  P           D+   G +F  +PFG G R C G +L    +  +L H+L HF
Sbjct:  283 PQHY-TGIVAELLLKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRP--ERYNPQRWLDIRGSGRNFHHVPFGFGMRQCLGRRLAEAEMLLLLHHVLKHF 471          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: THAS_MACFA (Thromboxane-A synthase OS=Macaca fascicularis GN=TBXAS1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 57/195 (29.23%), Postives = 88/195 (45.13%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNL----PYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW-APPEGVKPEEID 651
            L+ D I+G  +  + AG +    +  +    L  NP  Q+K   E+D    F+      +F +L    PYL  V  E LR++PP        A  + ++ G  +P G+ + + V A+  DP  W  P           +   +   F  LPFGAG R C G +LG+  V   L H+LH F + A PE   P +++
Sbjct:  326 LTVDEIVGQAFIFLIAGYEIVTNTLSFATYLLATNPDCQEKLLREVDL---FKEKHMVPEFCSLEEGLPYLDMVIAETLRMYPPA-FRFTREAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSP-ETFNPERFTAEAQQQHRPFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFQFQACPETQVPLQLE 515          
The following BLAST results are available for this feature:
BLAST of CF835261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP3AO_SHEEP1.856e-1328.33Cytochrome P450 3A24 OS=Ovis aries GN=CYP3A24 PE=2... [more]
CP2BA_MOUSE1.856e-1324.09Cytochrome P450 2B10 OS=Mus musculus GN=Cyp2b10 PE... [more]
CP11B_RANCA1.856e-1325.96Cytochrome P450 11B, mitochondrial OS=Rana catesbe... [more]
C513D_DICDI1.856e-1326.32Probable cytochrome P450 513D1 OS=Dictyostelium di... [more]
C340_ORYLA1.856e-1328.28Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40... [more]
CP2A9_MESAU2.424e-1328.04Cytochrome P450 2A9 OS=Mesocricetus auratus GN=CYP... [more]
CP2A2_RAT2.424e-1326.82Cytochrome P450 2A2 OS=Rattus norvegicus GN=Cyp2a2... [more]
C4D21_DROME2.424e-1328.40Probable cytochrome P450 4d21 OS=Drosophila melano... [more]
C11B2_HUMAN2.424e-1328.50Cytochrome P450 11B2, mitochondrial OS=Homo sapien... [more]
THAS_MACFA3.166e-1329.23Thromboxane-A synthase OS=Macaca fascicularis GN=T... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835261 ID=CF835261; Name=CF835261; organism=Citrus sinensis; type=EST; length=711bp
ACACACTTGCTCGCCAGAAGAGCGGTGGTACCAACCCATTACTTTGTTGA
TGCTTTGCTTACACTGCAAGAAAAATATGACCTAAGTGAAGACACTATCA
TTGGACTCCTCTGGGACATGATCACAGCGGGCATGGACACAACTGCAATC
TCAACAGAATGGGGAATGGCCGAGCTCATTAAGAACCCTAGAGTGCAACA
AAAGGCTCAAGAGGAACTAGACCGTGTGATAGGATTTGAACGTGTGATGA
CGGAAACCGATTTCTCAAACCTTCCTTACTTACAAGCTGTAGCCAAGGAG
GCTCTAAGGTTGCACCCACCAACTCCCCTGATGCTTCCTCACCGTGCCAA
TGCCAATGTTAAGATAGGTGGCTACGATGTTCCTAAGGGATCAAACATTC
ACGTCAACGTATGGGCAGTAGCTCGGGATCCTGCAGTCTGGAAGGACCCG
TTAGAGTTCCGGCCTGAGCGGTTCTTCGAGGAGGATGTGGACATGAAAGG
CCATGATTTTAGGCTACTACCATTTGGTGCTGGTAGGAGAGTGTGCCCAG
GTGCACAACTTGGTATAAATTTGGTCACGTCAATGTTGGGGCATCTATTA
CACCATTTTGCTTGGGCGCCACCAGAGGGAGTGAAGCCAGAGGAAATTGA
CATGTCAGAAAATCCTGGATTGGTTACATTTATGAAGACACCAGTACACG
CTGTGCCAACT
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