CF835261

Overview
NameCF835261
Unique NameCF835261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4F3_MOUSE (Leukotriene-B(4) omega-hydroxylase 2 OS=Mus musculus GN=Cyp4f3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 65/228 (28.51%), Postives = 103/228 (45.18%), Query Frame = 1
Query:    7 LLARRAVVPTHYFVDALLTLQEKYD--LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTET---DFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVD-MKGHD-FRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGV---KPEEIDMSE 660
            +L  +A   T  F+D LL  ++++   LS++ I       +  G DTTA    W +  L ++P  Q++ ++E+  ++  +R   E    D + LP+L    KE+LRLHPP   +        V   G  +PKG    ++++    +PAVW DP           D D +KG      +PF AG R C G    ++ +   L   L  F   P +     KPE I  +E
Sbjct:  286 VLKAKAKAKTLDFIDVLLLSKDEHGKALSDEDIRAEADTFMFGGHDTTASGLSWILYNLARHPEYQERCRQEVRELLR-DREPEEIEWDDLAQLPFLTMCIKESLRLHPPVTAISRCCTQDIVLPDGRVIPKGVISRISIFGTHHNPAVWPDP---EVYDPFRFDADNVKGRSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRVLPDDKEPRRKPELILRAE 509          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4A6_RABIT (Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CYP4A6 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 57/221 (25.79%), Postives = 91/221 (41.18%), Query Frame = 1
Query:   43 FVDALL--TLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTFMKTPVH 699
            F+D LL   ++    LS+  +   +   +  G DTTA    W    L  +P  Q + +EE+  ++G    +T      +PY     KEALRL+PP P +    ++      G  +PKG  + ++++A+  +P VW +P                 H    LPF  G R C G Q  +N +   +   L  F   P     P+     + P LV      +H
Sbjct:  291 FLDVLLFAKMENGSSLSDQDLRAEVDTFMFEGHDTTASGISWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEALRLYPPVPGVGRQLSSPVTFPDGRSLPKGVIVTLSIYALHHNPKVWPNPEVFDPFPFAPGSA---RHSHAFLPFSGGPRNCIGKQFAMNELKVAVALTLVRFELLPDPKRVPD-----QKPRLVLKSSNGIH 503          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP3AR_ONCMY (Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp3a27 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 55/199 (27.64%), Postives = 90/199 (45.23%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVK-PEEIDMSENPGLV 675
            L++  I+      I AG +T++ +  +    L  N  V  K QEE+D V   +  +       + YL  V  E+LRL+P  P  L   A   V+I G  +PK   + V  W + RDP +W DP           + +     +  +PFGAG R C G +  + ++   +  +L  F ++  +  + P E+D   N GL+
Sbjct:  295 LTDHEILSQAMIFIFAGYETSSSTMSFLAYNLATNHHVMTKLQEEIDTVFPNKAPIQYEALMQMDYLDCVLNESLRLYPIAP-RLERVAKKTVEINGIVIPKDCIVLVPTWTLHRDPEIWSDPEEFKPERFSKENKE-SIDPYTYMPFGAGPRNCIGMRFALIMIKLAMVEILQSFTFSVCDETEIPLEMD---NQGLL 488          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP3A4_HUMAN (Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 52/167 (31.14%), Postives = 79/167 (47.31%), Query Frame = 1
Query:  121 ITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            I AG +TT+    + M EL  +P VQQK QEE+D V+  +   T      + YL  V  E LRL  P  + L      +V+I G  +PKG  + +  +A+ RDP  W +P           + D     +   PFG+G R C G +  +  +   L  +L +F++ P
Sbjct:  303 IFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLF-PIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKP 467          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2G1_RABIT (Cytochrome P450 2G1 OS=Oryctolagus cuniculus GN=CYP2G1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 48/181 (26.52%), Postives = 88/181 (48.62%), Query Frame = 1
Query:  115 DMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 657
            ++  AG +T + +  +G   ++K+P VQ K  EE+++VIG  R+ +  D   +P+  AV  E  RL    P+ +PH    +    GY +PKG+++   + +V +DP  +  P               K ++   +PF +G+R+C G  +    +      +L +F+  P   V P  ID++
Sbjct:  297 NLFFAGTETVSSTLRYGFLLIMKHPEVQTKIYEEINQVIGPHRIPSVDDRVKMPFTDAVIHEIQRLTDIVPMGVPHNVIRDTHFRGYLLPKGTDVFPLLGSVLKDPKYFCHPDDFYPQHFLDEQGRFKKNE-AFVPFSSGKRICLGEAMARMELFLYFTSILQNFSLHPL--VPPVNIDIT 474          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2B6_HUMAN (Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 46/177 (25.99%), Postives = 84/177 (47.46%), Query Frame = 1
Query:  127 AGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMS 657
            AG +TT+ +  +G   ++K P V ++   E+++VIG  R     D + +PY +AV  E  R     P+ +PH    +    GY +PK + + + +     DP  ++ P           +  +K  +   +PF  G+R+C G  +    +      +L +F+ A P  V PE+ID++
Sbjct:  298 AGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASP--VAPEDIDLT 471          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C518A_DICDI (Probable cytochrome P450 518A1 OS=Dictyostelium discoideum GN=cyp518a1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 48/181 (26.52%), Postives = 82/181 (45.30%), Query Frame = 1
Query:   88 EDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSN-LPYLQAVAKEALRLHPPTPLMLPHRANANVKI--GGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            + +II ++ ++I AG +T + + EW +  ++ N   Q K   EL   +     M +    N  P   A  KE LRL+PP P  +P + N + +I  G   +PKG+ I  +++++ RD   W  P            +D   H     P+G G + C G     + +   L +L+ +F   P
Sbjct:  287 QSSIIPMVNELILAGTETNSSTAEWFILTMVNNLDYQDKIYNELKSTLETTTAMIKLSNRNQTPLFNAALKEVLRLYPPVPFGVPRQVNQSFEINGGSLKIPKGTQIIQSLYSIFRDENYWDSP----DQFKPERFLDQDSHSNNYFPYGIGVKNCIGMGFSQDELYISLSNLVLNFKLLP 463          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4A5_RABIT (Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CYP4A5 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 50/195 (25.64%), Postives = 82/195 (42.05%), Query Frame = 1
Query:   43 FVDALL--TLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            F+D LL   ++    LS+  +   +   +  G DTTA    W    L  +P  Q + +EE+  ++G    +T      +PY     KEA+RL+PP P +    ++      G  +PKG  + ++++ +  +P VW +P                 H    LPF  G R C G Q  +N +   +   L  F   P
Sbjct:  292 FLDVLLFAKMENGSSLSDQDLRAEVDTFMFEGHDTTASGVSWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEAMRLYPPVPAISRDLSSPVTFPDGRSLPKGFTVTLSIYGLHHNPNVWPNPEVFDPGRFTPGSA---RHSHAFLPFSGGARNCIGKQFAMNELKVAVALTLVRFELLP 483          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C12C1_DROME (Probable cytochrome P450 12c1, mitochondrial OS=Drosophila melanogaster GN=Cyp12c1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 51/175 (29.14%), Postives = 83/175 (47.43%), Query Frame = 1
Query:   64 LQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEE-LDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKG--------HDFRLLPFGAGRRVCPGAQL 561
            L++   +     + +  DM+  G+DTT+ +    +  L KNP  QQ+ +EE L ++       T  D  +LPYL+AV KE+LRL+P T       A A+V + GY +PKG+ + +    + +D  ++                D K         + F  LPFG G R+C G ++
Sbjct:  302 LEQLLQIDRKLAVVMAMDMLMGGVDTTSTAISGILLNLAKNPEKQQRLREEVLSKLTSLHSEFTVEDMKSLPYLRAVIKESLRLYPVT-FGNARSAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRI 475          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C11B1_PAPHU (Cytochrome P450 11B1, mitochondrial OS=Papio hamadryas ursinus GN=CYP11B1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 50/176 (28.41%), Postives = 84/176 (47.73%), Query Frame = 1
Query:   79 DLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHH 606
            +LS D I     ++    +DTT       + EL +NP VQQ  ++E            +   + LP L+A  KE LRL+P   L L    ++++ +  Y +P G+ + V ++++ R+PA++  P           D+   G +F  +PFG G R C G +L    +  +L H+L H
Sbjct:  298 ELSPDAIKANSMELTAGSVDTTVFPLLMTLFELARNPNVQQALRQESLAAAASISEHPQKATTELPLLRAALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVRVFLYSLGRNPALFPRP--ERYNPQRWLDIRGSGRNFYHVPFGFGMRQCLGRRLAEAEMLLLLHHVLKH 470          
The following BLAST results are available for this feature:
BLAST of CF835261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP4F3_MOUSE3.166e-1328.51Leukotriene-B(4) omega-hydroxylase 2 OS=Mus muscul... [more]
CP4A6_RABIT3.166e-1325.79Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP3AR_ONCMY3.166e-1327.64Cytochrome P450 3A27 OS=Oncorhynchus mykiss GN=cyp... [more]
CP3A4_HUMAN3.166e-1331.14Cytochrome P450 3A4 OS=Homo sapiens GN=CYP3A4 PE=1... [more]
CP2G1_RABIT3.166e-1326.52Cytochrome P450 2G1 OS=Oryctolagus cuniculus GN=CY... [more]
CP2B6_HUMAN3.166e-1325.99Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1... [more]
C518A_DICDI3.166e-1326.52Probable cytochrome P450 518A1 OS=Dictyostelium di... [more]
CP4A5_RABIT4.135e-1325.64Cytochrome P450 4A5 OS=Oryctolagus cuniculus GN=CY... [more]
C12C1_DROME4.135e-1329.14Probable cytochrome P450 12c1, mitochondrial OS=Dr... [more]
C11B1_PAPHU4.135e-1328.41Cytochrome P450 11B1, mitochondrial OS=Papio hamad... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835261 ID=CF835261; Name=CF835261; organism=Citrus sinensis; type=EST; length=711bp
ACACACTTGCTCGCCAGAAGAGCGGTGGTACCAACCCATTACTTTGTTGA
TGCTTTGCTTACACTGCAAGAAAAATATGACCTAAGTGAAGACACTATCA
TTGGACTCCTCTGGGACATGATCACAGCGGGCATGGACACAACTGCAATC
TCAACAGAATGGGGAATGGCCGAGCTCATTAAGAACCCTAGAGTGCAACA
AAAGGCTCAAGAGGAACTAGACCGTGTGATAGGATTTGAACGTGTGATGA
CGGAAACCGATTTCTCAAACCTTCCTTACTTACAAGCTGTAGCCAAGGAG
GCTCTAAGGTTGCACCCACCAACTCCCCTGATGCTTCCTCACCGTGCCAA
TGCCAATGTTAAGATAGGTGGCTACGATGTTCCTAAGGGATCAAACATTC
ACGTCAACGTATGGGCAGTAGCTCGGGATCCTGCAGTCTGGAAGGACCCG
TTAGAGTTCCGGCCTGAGCGGTTCTTCGAGGAGGATGTGGACATGAAAGG
CCATGATTTTAGGCTACTACCATTTGGTGCTGGTAGGAGAGTGTGCCCAG
GTGCACAACTTGGTATAAATTTGGTCACGTCAATGTTGGGGCATCTATTA
CACCATTTTGCTTGGGCGCCACCAGAGGGAGTGAAGCCAGAGGAAATTGA
CATGTCAGAAAATCCTGGATTGGTTACATTTATGAAGACACCAGTACACG
CTGTGCCAACT
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