CF835261

Overview
NameCF835261
Unique NameCF835261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C97B1_PEA (Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 51/181 (28.18%), Postives = 79/181 (43.65%), Query Frame = 1
Query:  109 LWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIG-------GYDVPKGSNIHVNVWAVARDPAVWKDP--LXXXXXXXXXXDVDMKG-------------------HDFRLLPFGAGRRVCPGAQLGI 567
            L  M+ AG +TTA    W +  L +NP   +KAQ E+D V+G  +   E     L Y++ +  E LRL+P  PL++      +V  G       GY +P G+++ ++V+ + R P  W  P             + +++G                    DF  LPFG G R C G Q  +
Sbjct:  356 LMTMLIAGHETTAAVLTWAVFLLAQNPDKMKKAQAEVDLVLGMGKPTFEL-LKKLEYIRLIVVETLRLYPQPPLLIRRSLKPDVLPGGHKGDKDGYTIPAGTDVFISVYNLHRSPYFWDRPNDFEPERFLVQNNNEEVEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFAL 535          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C519A_DICDI (Probable cytochrome P450 519A1 OS=Dictyostelium discoideum GN=cyp519a1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.400e-13
Identity = 71/248 (28.63%), Postives = 103/248 (41.53%), Query Frame = 1
Query:   91 DTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFE---RVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVAR---------DPAVW------KDPLXXXXXXXXXXDVDM-------------------------KGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSENPGLVTFMKTPVHAV 705
            D II +  D + AG D+T+ + EW    +I NP VQ+KA +EL   +  E   + +  +   N PY+ ++ KE LRL P   L +P  A     I GY +PKGS I  NV+ ++           P  W      KD L            D+                            D   +P+  G R CPGA L    + S+  ++L +F     +G KP  ID +E  GL   + T VH +
Sbjct:  282 DMIIHIGMDCLLAGSDSTSATCEWFCLFMINNPDVQKKAYQELINALKDEDNKKFIPISKKDNCPYMLSIFKEVLRLRPVGVLGIPRVALEETTIMGYTIPKGSQIFQNVYGMSHLFVSDPYKFKPERWIEYKKQKDLLKEKEMQQLQEGADVVIDNKNNIKNNNSSNKPNSKTNSIFDDLDKVSIPYSVGNRKCPGASLSELALFSLCSNILLNFELKSIDG-KP--IDDTEVYGLT--IHTKVHPI 524          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: THAS_HUMAN (Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 57/195 (29.23%), Postives = 88/195 (45.13%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNL----PYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW-APPEGVKPEEID 651
            L+ D I+G  +  + AG +    +  +    L  NP  Q+K   E+D    F+      +F +L    PYL  V  E LR++PP        A  + ++ G  +P G+ + + V A+  DP  W  P           +   +   F  LPFGAG R C G +LG+  V   L H+LH F + A PE   P +++
Sbjct:  326 LTVDEIVGQAFIFLIAGYEIITNTLSFATYLLATNPDCQEKLLREVDV---FKEKHMAPEFCSLEEGLPYLDMVIAETLRMYPPA-FRFTREAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSP-ETFNPERFTAEARQQHRPFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFRFQACPETQVPLQLE 515          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4F3_RAT (Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus norvegicus GN=Cyp4f3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 65/227 (28.63%), Postives = 101/227 (44.49%), Query Frame = 1
Query:   10 LARRAVVPTHYFVDALLTLQEKYD--LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTET---DFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDM-KGHD-FRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGV---KPEEIDMSE 660
            L  +A   T  F+D LL  ++++   LS++ I       +  G DTTA    W +  L K+P  Q++ ++E+  ++  +R   E    D + LP+L    KE+LRLHPP   +        +   G  +PKG    ++++    +PAVW DP           D D  KG      +PF AG R C G    ++ +   L   L  F   P +     KPE I  +E
Sbjct:  287 LKAKAKAKTLDFIDVLLLSKDEHGEALSDEDIRAEADTFMFGGHDTTASGLSWILYNLAKHPEYQERCRQEVRELLR-DREPEEIEWDDLAQLPFLTMCIKESLRLHPPATAISRCCTQDIMLPDGRVIPKGVICRISIFGTHHNPAVWPDP---EVYNPFRFDADNGKGRSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRVLPDDKEPRRKPELILRAE 509          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4A4_RABIT (Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CYP4A4 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 51/195 (26.15%), Postives = 82/195 (42.05%), Query Frame = 1
Query:   43 FVDALL--TLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            F+D LL   ++    LS+  +   +   +  G DTTA    W    L  +P  Q + +EE+  ++G    +T      +PY     KEALRL+PP P +    +       G  +PKG  + ++++ +  +P VW++P             D   H    LPF  G R C G Q  +  +   +   L  F   P
Sbjct:  291 FLDVLLFAKMENGSSLSDQDLRAEVDTFMFEGHDTTASGVSWIFYALATHPEHQHRCREEIQGLLGDGASITWEHLDQMPYTTMCIKEALRLYPPVPSVTRQLSKPVTFPDGRSLPKGVILFLSIYGLHYNPKVWQNP---EVFDPFRFAPDSAYHSHAFLPFSGGARNCIGKQFAMRELKVAVALTLVRFELLP 482          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2S1_HUMAN (Cytochrome P450 2S1 OS=Homo sapiens GN=CYP2S1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 48/156 (30.77%), Postives = 77/156 (49.36%), Query Frame = 1
Query:   94 TIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQL 561
            T+I LL+    AG  T + +  + +  L+K P VQ+  +EEL+R +G  +  +  D + LPY  AV  EA RL    P+ +P       +  GY +P+G+ +   + ++  DP ++K P           D   + H+   LPF  G+RVC G  L
Sbjct:  295 TVIYLLF----AGTMTVSTTVGYTLLLLMKYPHVQKWVREELNRELGAGQAPSLGDRTRLPYTDAVLHEAQRLLALVPMGIPRTLMRTTRFRGYTLPQGTEVFPLLGSILHDPNIFKHPEEFNPDRFLDADGRFRKHE-AFLPFSLGKRVCLGEGL 445          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP2DB_MOUSE (Cytochrome P450 2D11 OS=Mus musculus GN=Cyp2d11 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 60/213 (28.17%), Postives = 96/213 (45.07%), Query Frame = 1
Query:   31 PTHYFVDALLTLQEKY------DLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALR----LHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFR---LLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEG 630
            P     DA L   EK         +++ +  ++ D+ TAGM TT+ +  W +  +I +P VQ++ Q+E+D VIG  +     D + +PY  AV  E  R    LH    L    +     ++  + V KGS +  N+ +V +   VW+ PL           +D +GH  +    +PF AG R C G  L    +      LL  F+ + P+G
Sbjct:  270 PPRNLTDAFLAEIEKAKGNAESSFNDENLRMVVLDLFTAGMVTTSTTLSWALLLMILHPDVQRRVQQEIDAVIGQVQHPEMADQARMPYTNAVIHEVQRFGTLLH---CLCHASQVVTFTQVQDFLVTKGSTLIPNLSSVLKGETVWEKPLRFHPEHF----LDAQGHFVKPEAFMPFSAGHRSCLGEALARMELFLFFTCLLQRFSISVPDG 475          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP11A_CAPHI (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Capra hircus GN=CYP11A1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 51/169 (30.18%), Postives = 86/169 (50.89%), Query Frame = 1
Query:  115 DMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNL----PYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF 609
            +M+  G+DTT+++ +W + E+ ++  VQ+  +EE+       R   E D S +    P L+A  KE LRLH P  + L     +++ +  Y +P  + + V ++A+ RDPA + +P           D D+    FR L FG G R C G ++    +T  L H+L +F
Sbjct:  321 EMLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNA----RRQAEGDISKMLQMVPLLKASIKETLRLH-PISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSNPDKFDPTRWLGKDKDL--IHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENF 482          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C554A_DICDI (Probable cytochrome P450 554A1 OS=Dictyostelium discoideum GN=cyp554a1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 52/175 (29.71%), Postives = 84/175 (48.00%), Query Frame = 1
Query:   91 DTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGG--YDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF 609
            + I  +  D + AG DTT  + EW + +L+ NP  Q+   +EL ++   E  +T  D  N P+L +  KE  RL+P  PL LP ++   + IG   Y +P  +NI ++V   + D   +KDP           D  +       L FG G R C G  + +N +   L +L+ ++
Sbjct:  303 ENIKSICIDFLMAGTDTTGSTIEWIILKLVNNPEFQELIFQELKKLNKSE--ITANDKINTPFLNSFIKETNRLYPIAPLSLPRKSINEMIIGDNKYYIPANTNILMDVKGFSLDENNYKDP------NEFKPDRFLNSKVSDTLNFGIGPRNCIGQTIAMNQIHIFLSNLILNY 469          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C356_FUNHE (Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=cyp3a56 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 53/197 (26.90%), Postives = 89/197 (45.18%), Query Frame = 1
Query:   67 QEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP-PEGVKPEEIDM 654
            Q+   L++  I+      I AG +T++ S  +    L  NP V +K QEE+D     +  +       + YL  V  E+LRL  P    L   A A V+I G  +PK   + +  W + RDP +W +P           + D     +  +PFG+G R C G +  + L+   +  +L  ++++   E   P E+D+
Sbjct:  284 QQDKSLTDHEILSQSMIFIFAGYETSSSSLTFLAYNLATNPEVMKKLQEEIDATFPNKAPVHYQPLMEMEYLDCVINESLRLF-PIAARLERVAKAAVEINGIVIPKDMVVMIPTWPLHRDPEIWPEPEAFKPERFSKKNKD-NIDPYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYSFSVCKETEVPFEMDI 478          
The following BLAST results are available for this feature:
BLAST of CF835261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C97B1_PEA5.400e-1328.18Cytochrome P450 97B1 OS=Pisum sativum GN=CYP97B1 P... [more]
C519A_DICDI5.400e-1328.63Probable cytochrome P450 519A1 OS=Dictyostelium di... [more]
THAS_HUMAN7.053e-1329.23Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 P... [more]
CP4F3_RAT7.053e-1328.63Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus nor... [more]
CP4A4_RABIT7.053e-1326.15Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CY... [more]
CP2S1_HUMAN7.053e-1330.77Cytochrome P450 2S1 OS=Homo sapiens GN=CYP2S1 PE=2... [more]
CP2DB_MOUSE7.053e-1328.17Cytochrome P450 2D11 OS=Mus musculus GN=Cyp2d11 PE... [more]
CP11A_CAPHI7.053e-1330.18Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C554A_DICDI7.053e-1329.71Probable cytochrome P450 554A1 OS=Dictyostelium di... [more]
C356_FUNHE7.053e-1326.90Cytochrome P450 3A56 OS=Fundulus heteroclitus GN=c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835261 ID=CF835261; Name=CF835261; organism=Citrus sinensis; type=EST; length=711bp
ACACACTTGCTCGCCAGAAGAGCGGTGGTACCAACCCATTACTTTGTTGA
TGCTTTGCTTACACTGCAAGAAAAATATGACCTAAGTGAAGACACTATCA
TTGGACTCCTCTGGGACATGATCACAGCGGGCATGGACACAACTGCAATC
TCAACAGAATGGGGAATGGCCGAGCTCATTAAGAACCCTAGAGTGCAACA
AAAGGCTCAAGAGGAACTAGACCGTGTGATAGGATTTGAACGTGTGATGA
CGGAAACCGATTTCTCAAACCTTCCTTACTTACAAGCTGTAGCCAAGGAG
GCTCTAAGGTTGCACCCACCAACTCCCCTGATGCTTCCTCACCGTGCCAA
TGCCAATGTTAAGATAGGTGGCTACGATGTTCCTAAGGGATCAAACATTC
ACGTCAACGTATGGGCAGTAGCTCGGGATCCTGCAGTCTGGAAGGACCCG
TTAGAGTTCCGGCCTGAGCGGTTCTTCGAGGAGGATGTGGACATGAAAGG
CCATGATTTTAGGCTACTACCATTTGGTGCTGGTAGGAGAGTGTGCCCAG
GTGCACAACTTGGTATAAATTTGGTCACGTCAATGTTGGGGCATCTATTA
CACCATTTTGCTTGGGCGCCACCAGAGGGAGTGAAGCCAGAGGAAATTGA
CATGTCAGAAAATCCTGGATTGGTTACATTTATGAAGACACCAGTACACG
CTGTGCCAACT
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