CF835261

Overview
NameCF835261
Unique NameCF835261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C330_FUNHE (Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=cyp3a30 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 53/197 (26.90%), Postives = 89/197 (45.18%), Query Frame = 1
Query:   67 QEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP-PEGVKPEEIDM 654
            Q+   L++  I+      I AG +T++ S  +    L  NP V +K QEE+D     +  +       + YL  V  E+LRL  P    L   A A V+I G  +PK   + +  W + RDP +W +P           + D     +  +PFG+G R C G +  + L+   +  +L  ++++   E   P E+D+
Sbjct:  284 QQDKSLTDHEILSQSMIFIFAGYETSSSSLTFLAYNLATNPEVMKKLQEEIDATFPNKAPVHYQPLMEMEYLDCVINESLRLF-PIAARLERVAKAAVEINGVVIPKDMVVMIPTWPLHRDPEIWPEPEAFKPERFSKKNKD-NIDPYIYMPFGSGPRNCIGMRFALVLIKLAVVEILQQYSFSVCKETEVPFEMDI 478          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: THAS_BOVIN (Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 55/195 (28.21%), Postives = 89/195 (45.64%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNL----PYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW-APPEGVKPEEID 651
            LS D ++G  +  + AG +    +  +    L  NP  Q+K  EE+D    F +     ++ +L    PYL  V KE LR++PP        A  + ++ G  +P G+ +   V A+  DP  W +P           +   +   +  LPFGAG R C G +LG+  +   L H+L  F + A PE   P +++
Sbjct:  326 LSVDEVVGQAFIFLIAGYEIVTNTLSFATYLLATNPECQEKLLEEVDC---FSKEHLAPEYCSLQEGLPYLDMVIKETLRMYPPA-FRFTRVAAQDCEVLGQRIPAGAVLETAVGALHYDPEHWPNP-ENFNPERFTAEAQQRRRPYTYLPFGAGPRSCLGVRLGLLELKLTLLHILRKFRFEACPETQVPLQLE 515          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4FE_MOUSE (Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus GN=Cyp4f14 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 55/210 (26.19%), Postives = 95/210 (45.24%), Query Frame = 1
Query:   10 LARRAVVPTHYFVDALLTLQEK--YDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVI-GFERVMTE-TDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPE 627
            L  +A   T  F+D LL  +++   +LS++ I       +  G DTTA    W +  L ++P  Q++ ++E+  ++ G E    E  D + LP+L    KE+LRLHPP  ++        +   G  +PKG    ++++ +  +P+VW DP           ++         +PF AG R C G    ++ +   L   L  F   P +
Sbjct:  287 LKSKAKSKTLDFIDVLLLSKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWILYNLARHPEYQERCRQEVQELLRGREPEEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEVYDPFRFDPENI-KDSSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRLLPDD 495          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4AC_RAT (Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a12 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 51/195 (26.15%), Postives = 81/195 (41.54%), Query Frame = 1
Query:   43 FVDALL--TLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            F+D LL   ++    LS+  +   +   +  G DTTA    W    L  NP  QQ  ++E+  ++G    +T  D   +PY     KEALR++PP   +    +       G  +PKG  + ++ + +  +P VW +P             +   H    LPF  G R C G Q  +N +   +   L  F   P
Sbjct:  289 FLDILLFARIENGSSLSDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQGCRKEIQSLLGDGASITWDDLDKMPYTTMCIKEALRIYPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNP---EVFDPYRFAPESSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLP 480          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP4AB_HUMAN (Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 48/178 (26.97%), Postives = 79/178 (44.38%), Query Frame = 1
Query:   43 FVDALLT--LQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGIN 570
            F+D LL   ++    LS+  +   +   +  G DTTA    W +  L  +P+ Q++ +EE+  ++G    +T      +PY     KEALRL+PP P +    +       G  +PKG  + ++++ +  +P VW +P                 H    LPF  G R C G Q  +N
Sbjct:  291 FLDILLLAKMENGSILSDKDLRAEVDTFMFEGHDTTASGISWILYALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQ---HSHAFLPFSGGSRNCIGKQFAMN 465          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP3AP_MOUSE (Cytochrome P450 3A25 OS=Mus musculus GN=Cyp3a25 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 49/171 (28.65%), Postives = 84/171 (49.12%), Query Frame = 1
Query:  121 ITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGH--DFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPE 627
            I  G D T+ S    M EL  +P VQ+K Q+E+DR +  +  +T     ++ YL  V  E+LRL+ P  + L   +  +V+I G  +PKG+ + + ++ + R+P  W +P             + KG+   +  +PFG G R C G +  +  +   +  +L +F   P E
Sbjct:  303 IFGGYDATSTSISLIMYELATHPDVQKKLQDEIDRTLPNKAPVTYDALMDMEYLDMVVNESLRLY-PIAIRLERVSKKDVEINGVFIPKGTVVMIPIYPLHRNPEYWPEP---QEFCPERFSKENKGNIDPYIYMPFGNGPRNCIGMRFALISIKLAVIGVLQNFTVQPCE 469          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP3AL_CALJA (Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3A21 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 51/167 (30.54%), Postives = 78/167 (46.71%), Query Frame = 1
Query:  121 ITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            I AG +TT+ +  + M EL  +P VQQK QEE+D V+  +   T      + YL  V  E LRL  P  + L      +V+I G  +PKG  + +  +A+  DP  W +P           + D     +   PFG G R C G +  +  +   L  +L +F++ P
Sbjct:  303 IFAGYETTSSTLSFIMYELATHPDVQQKLQEEIDAVLPNKAPATYDTVLQMEYLDMVVNETLRLF-PLAMRLERVCKKDVEINGVFIPKGVVVMIPSYALHYDPKYWTEPEKFLPERFSKNNKD-NIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFKP 467          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP3A5_HUMAN (Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 49/167 (29.34%), Postives = 78/167 (46.71%), Query Frame = 1
Query:  121 ITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            I AG +TT+    + + EL  +P VQQK Q+E+D V+  +   T      + YL  V  E LRL  P  + L      +V+I G  +PKGS + +  +A+  DP  W +P              +  + +   PFG G R C G +  +  +   L  +L +F++ P
Sbjct:  303 IFAGYETTSSVLSFTLYELATHPDVQQKLQKEIDAVLPNKAPPTYDAVVQMEYLDMVVNETLRLF-PVAIRLERTCKKDVEINGVFIPKGSMVVIPTYALHHDPKYWTEPEEFRPERFSKKKDSIDPYIY--TPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFKP 466          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C12B2_DROME (Probable cytochrome P450 12b2, mitochondrial OS=Drosophila melanogaster GN=Cyp12b2 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 56/223 (25.11%), Postives = 106/223 (47.53%), Query Frame = 1
Query:   64 LQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFER-VMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDV--DMKG-------HDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF--AWAPPEGVKPEEIDMSENPGLVTFMKTPV 696
            L++  + ++   + ++ DM+ AG+DTT+ +    +  L +NP  Q+K + EL R++   +  +T+ +  N+PYL+A  KE LR+   TP         ++ + GY VP+G+ + + V  ++ D   +              D+  D++        + F  LPFG G R C G ++    + ++L  LL  +  +W P   ++ E   +    G + F   PV
Sbjct:  310 LEQLLEHNKKVAVTMVMDMLMAGIDTTSSACLTILYHLARNPSKQEKLRRELLRILPTTKDSLTDQNTKNMPYLRACIKEGLRITSITPGNF-RITPKDLVLSGYQVPRGTGVLMGVLELSNDDKYFAQSSEFIPERWLKSDLAPDIQACPAARTRNPFVYLPFGFGPRTCIGKRIAELEIETLLVRLLRSYKVSWLPETPIEYESTIILSPCGDIRFKLEPV 531          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C11B1_MESAU (Cytochrome P450 11B1, mitochondrial OS=Mesocricetus auratus GN=CYP11B1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 50/176 (28.41%), Postives = 87/176 (49.43%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF 609
            L+ D I+    ++    +DTT++     + EL +NP VQQ  ++E            +   S+LP L+AV KE LRL+P   + L    ++++ +  Y VP G+ +H++++++ R+PAV+  P               +   F+ L FG G R C G +L    +  +L H+L  F
Sbjct:  298 LTMDAILANSLELTAGSVDTTSVPLVMTLFELARNPDVQQAVRQESLAAEASVAANPQRAMSDLPLLRAVLKETLRLYP-VAVFLERILSSDLVLQNYHVPAGTILHMSLYSMGRNPAVFPRPEHYLPQRWLE-----RNGSFQHLTFGFGVRQCLGKRLAQVEMLLLLHHVLKSF 467          
The following BLAST results are available for this feature:
BLAST of CF835261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C330_FUNHE7.053e-1326.90Cytochrome P450 3A30 OS=Fundulus heteroclitus GN=c... [more]
THAS_BOVIN9.211e-1328.21Thromboxane-A synthase OS=Bos taurus GN=TBXAS1 PE=... [more]
CP4FE_MOUSE9.211e-1326.19Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus... [more]
CP4AC_RAT9.211e-1326.15Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4AB_HUMAN9.211e-1326.97Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE... [more]
CP3AP_MOUSE9.211e-1328.65Cytochrome P450 3A25 OS=Mus musculus GN=Cyp3a25 PE... [more]
CP3AL_CALJA9.211e-1330.54Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3... [more]
CP3A5_HUMAN9.211e-1329.34Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1... [more]
C12B2_DROME9.211e-1325.11Probable cytochrome P450 12b2, mitochondrial OS=Dr... [more]
C11B1_MESAU9.211e-1328.41Cytochrome P450 11B1, mitochondrial OS=Mesocricetu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835261 ID=CF835261; Name=CF835261; organism=Citrus sinensis; type=EST; length=711bp
ACACACTTGCTCGCCAGAAGAGCGGTGGTACCAACCCATTACTTTGTTGA
TGCTTTGCTTACACTGCAAGAAAAATATGACCTAAGTGAAGACACTATCA
TTGGACTCCTCTGGGACATGATCACAGCGGGCATGGACACAACTGCAATC
TCAACAGAATGGGGAATGGCCGAGCTCATTAAGAACCCTAGAGTGCAACA
AAAGGCTCAAGAGGAACTAGACCGTGTGATAGGATTTGAACGTGTGATGA
CGGAAACCGATTTCTCAAACCTTCCTTACTTACAAGCTGTAGCCAAGGAG
GCTCTAAGGTTGCACCCACCAACTCCCCTGATGCTTCCTCACCGTGCCAA
TGCCAATGTTAAGATAGGTGGCTACGATGTTCCTAAGGGATCAAACATTC
ACGTCAACGTATGGGCAGTAGCTCGGGATCCTGCAGTCTGGAAGGACCCG
TTAGAGTTCCGGCCTGAGCGGTTCTTCGAGGAGGATGTGGACATGAAAGG
CCATGATTTTAGGCTACTACCATTTGGTGCTGGTAGGAGAGTGTGCCCAG
GTGCACAACTTGGTATAAATTTGGTCACGTCAATGTTGGGGCATCTATTA
CACCATTTTGCTTGGGCGCCACCAGAGGGAGTGAAGCCAGAGGAAATTGA
CATGTCAGAAAATCCTGGATTGGTTACATTTATGAAGACACCAGTACACG
CTGTGCCAACT
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