CF835261

Overview
NameCF835261
Unique NameCF835261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C11B1_SHEEP (Cytochrome P450 11B1, mitochondrial OS=Ovis aries GN=CYP11B1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.571e-12
Identity = 56/195 (28.72%), Postives = 95/195 (48.72%), Query Frame = 1
Query:   31 PTHYFVDALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVM--TETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF 609
            P HY    +  L  + D++ DTI     D+    +DTTA      + EL +NP VQQ  ++E   ++   R+    +   + LP L+A  KE LRL+ P  + L  + ++++ +  Y +P G+ + V ++++ R+PAV+  P           D    G  F  L FG G R C G ++    +  +L H+L +F
Sbjct:  283 PWHYS-GIVAELLMRADMTLDTIKANTIDLTAGSVDTTAFPLLMTLFELARNPEVQQALRQE--SLVAEARISENPQRATTELPLLRAALKETLRLY-PVGITLERQVSSDLVLQNYHIPAGTLVKVLLYSLGRNPAVFARP--ESYHPQRWLDRQGSGSRFPHLAFGFGMRQCLGRRVAEVEMLLLLHHVLKNF 471          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: THAS_RAT (Thromboxane-A synthase OS=Rattus norvegicus GN=Tbxas1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12
Identity = 56/195 (28.72%), Postives = 90/195 (46.15%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNL----PYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW-APPEGVKPEEID 651
            L+ D I G  +  + AG + T  +  +    L  +P  Q++  +E+D    F       ++ NL    PYL  V  E LR++PP        A  + ++ G  +P GS + + V A+  DP  W +P           +  ++   F  LPFGAG R C G +LG+ +V   L  +LH F + A PE   P +++
Sbjct:  326 LTVDEIAGQAFLFLIAGHEITTNTLSFITYLLATHPECQERLLKEVDL---FMEKHPAPEYCNLQEGLPYLDMVVAETLRMYPPA-FRFTREAAQDCEVLGQHIPAGSVLEIAVGALHHDPEHWPNP-ETFDPERFTAEARLQQKPFTYLPFGAGPRSCLGVRLGLLVVKLTLLQVLHKFRFEACPETQVPLQLE 515          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP3AD_MOUSE (Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12
Identity = 55/204 (26.96%), Postives = 93/204 (45.59%), Query Frame = 1
Query:   82 LSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP------PEGVKPEEIDMSENPGLV 675
            LS+  I+      I AG +TT+ +  + +  L  +P VQ+K Q+E+D  +  +   T      + YL  V  E LRL+P     L      +V+I G  +PKG+ + +  +A+ +DP  W +P           + D   + +  LPFG+G R C G +  +  +   L  +L +F   P      P  +  + +   ENP L+
Sbjct:  290 LSDVEIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAALPNKAPATYDTLLQMEYLDMVVNETLRLYPIAG-RLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERFSKKNQD-SINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQPCKETEIPLKLSKQGLLQPENPLLL 491          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP3A6_RABIT (Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12
Identity = 49/166 (29.52%), Postives = 81/166 (48.80%), Query Frame = 1
Query:  118 MITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAW 615
            ++ AG +TT+ +  + M  L  +P VQQK QEE+D ++  + + T      + YL  V  E LRL+P     L      +V I G  +PKG+ + +  +A+ RDP  W +P           + D   + +   PFGAG R C G +  +  +   L  L+ +F++
Sbjct:  300 ILFAGYETTSSTLSFIMHLLATHPDVQQKLQEEIDTLLPNKELATYDTLVKMEYLDMVVNETLRLYPIAG-RLERVCKKDVDINGTFIPKGTIVMMPTYALHRDPQHWTEPDEFRPERFSKKNKD-NINPYIYHPFGAGPRNCLGMRFALMNIKLALVRLMQNFSF 463          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP11A_SHEEP (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Ovis aries GN=CYP11A1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12
Identity = 50/169 (29.59%), Postives = 86/169 (50.89%), Query Frame = 1
Query:  115 DMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNL----PYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHF 609
            +M+  G+DTT+++ +W + E+ ++  VQ+  ++E+       R   E D S +    P L+A  KE LRLH P  + L     +++ +  Y +P  + + V ++A+ RDPA + +P           D D+    FR L FG G R C G ++    +T  L H+L +F
Sbjct:  321 EMLAGGVDTTSMTLQWHLYEMARSLNVQEMLRKEVLNA----RRQAEGDISKMLQMVPLLKASIKETLRLH-PISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSNPDKFDPTRWLGKDKDL--IHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENF 482          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C85A3_SOLLC (Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CYP85A3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12
Identity = 46/193 (23.83%), Postives = 93/193 (48.19%), Query Frame = 1
Query:   67 QEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEE---LDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVK 636
            + +Y LS++ +I  +  ++ +G +T + ++   +  L  +P+  ++ ++E   +      E  +   DF  + + +AV  E LRL      +L  +   ++++ GY +PKG  I+V    +  DP ++ DP           ++D   H    L FG G R+CPG +LG+  +++ L + +  + W    G K
Sbjct:  259 KNRYTLSDEELIDQIITIMYSGFETVSTTSMMAVKYLHDHPKALEEIRKEHFAIREKKSLEDPIDYNDFKAMRFTRAVIYETLRLATIVNGVL-RKTTQDMELNGYMIPKGWRIYVYTRELNYDPLIYPDPYTFNPWRWLENNLD---HQSSFLMFGGGTRLCPGKELGVAEISTFLHYFVTRYRWEEVGGNK 447          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C5142_DICDI (Probable cytochrome P450 514A2 OS=Dictyostelium discoideum GN=cyp514a2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12
Identity = 46/159 (28.93%), Postives = 79/159 (49.69%), Query Frame = 1
Query:   91 DTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEEL--DRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVW-KDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQ 558
            D+I+  + D+I A +DTT+ S  + +A L  +  +Q K  EE+  + +      ++ +D S  PY+ ++  E  R +   PL  P+    ++++ GY + KG+ I+ N+         W +D L           ++ KG    LL FGAG R CPGA+
Sbjct:  296 DSILLSIVDIIIASVDTTSNSISFIIARLTNHQEIQSKIYEEIMSNDINNNSNNISFSDHSKYPYIISIMNETYRYYASVPLPEPNMTTEDIEVDGYKIAKGTQIYKNIRGTLISKEFWGEDALEFKPERFKTQTLNQKG----LLHFGAGPRGCPGAR 450          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-12
Identity = 48/167 (28.74%), Postives = 77/167 (46.11%), Query Frame = 1
Query:  121 ITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAP 621
            I  G +TT+ S  + + EL  +P VQQK QEE+D     +   T      + YL  V  E LR+ P     L      +V+I G  +PKG+ + V ++ +  +P  W +P           + D   + +  LPFG G R C G +  +  +   L  +L +F++ P
Sbjct:   14 IFGGYETTSTSLSFIIYELATHPDVQQKLQEEIDATFPNKAPPTYDALVQMEYLDMVVNETLRMFPIAG-RLERLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFWPEPEEFRPERFSKKNKD-GINPYVYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSFIP 178          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: C19AA_DANRE (Cytochrome P450 19A1a OS=Danio rerio GN=cyp19a1a PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-12
Identity = 60/208 (28.85%), Postives = 96/208 (46.15%), Query Frame = 1
Query:   43 FVDALLTLQEKYDLSEDTIIGLLWDMITAGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLL-PFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEGVKPEEIDMSEN 663
            F   L+  Q   +LS + +   + +M+ A  DT +IS  + +  L +NP V+ K  +E+D V+  +  +  +  S L  L++   E+LR HP     +  RA  +  I GY+V KG+NI +NV  + R     K             D   K    R   PFG+G R C G  + + ++ S+L  LL  F+  P +    E I  + N
Sbjct:  297 FTAELIFAQSHGELSAENVRQCVLEMVIAAPDTLSISLFFMLLLLKQNPDVELKILQEMDSVLAGQS-LQHSHLSKLQILESFINESLRFHPVVDFTM-RRALDDDVIEGYNVKKGTNIILNVGRMHRSEFFSK-------PNQFSLDNFHKNVPSRFFQPFGSGPRSCVGKHIAMVMMKSILVALLSRFSVCPMKACTVENIPQTNN 495          
BLAST of CF835261 vs. ExPASy Swiss-Prot
Match: CYPE_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 2 OS=Bacillus subtilis GN=cypE PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12
Identity = 62/236 (26.27%), Postives = 100/236 (42.37%), Query Frame = 1
Query:    7 LLARRAVVPTHYFVDAL-LTLQEKYDLSEDTII--GLLWDMIT---AGMDTTAISTEWGMAELIKNPRVQQKAQEELDRVIGFERVMTETDFSNLPYLQAVAKEALRLHPPTPLMLPHRANANVKIGGYDVPKGSNIHVNVWAVARDPAVWKDPLXXXXXXXXXXDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFAWAPPEG----------VKPEEIDMSENP 666
            ++A R   P     D L L L  K  ++ +T+    + + +IT   AG +TT+    + +  L+ +P   +KAQEE DRV+  +          L Y++ V  E LRL+P  P    +     V  G Y + KG  + V +  + RD   W                 +  H ++  PFG G+R C G Q  +   T +LG +L HF      G          +KP++  ++  P
Sbjct:  221 MIAERKANPDENIKDLLSLMLYAKDPVTGETLDDENIRYQIITFLIAGHETTSGLLSFAIYCLLTHPEKLKKAQEEADRVLT-DDTPEYKQIQQLKYIRMVLNETLRLYPTAPAFSLYAKEDTVLGGEYPISKGQPVTVLIPKLHRDQNAWGPDAEDFRPERFEDPSSIPHHAYK--PFGNGQRACIGMQFALQEATMVLGLVLKHFELINHTGYELKIKEALTIKPDDFKITVKP 453          
The following BLAST results are available for this feature:
BLAST of CF835261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C11B1_SHEEP1.571e-1228.72Cytochrome P450 11B1, mitochondrial OS=Ovis aries ... [more]
THAS_RAT2.052e-1228.72Thromboxane-A synthase OS=Rattus norvegicus GN=Tbx... [more]
CP3AD_MOUSE2.052e-1226.96Cytochrome P450 3A13 OS=Mus musculus GN=Cyp3a13 PE... [more]
CP3A6_RABIT2.052e-1229.52Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CY... [more]
CP11A_SHEEP2.052e-1229.59Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C85A3_SOLLC2.052e-1223.83Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CY... [more]
C5142_DICDI2.052e-1228.93Probable cytochrome P450 514A2 OS=Dictyostelium di... [more]
CP3AJ_CAPAE2.680e-1228.74Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
C19AA_DANRE2.680e-1228.85Cytochrome P450 19A1a OS=Danio rerio GN=cyp19a1a P... [more]
CYPE_BACSU3.500e-1226.27Probable bifunctional P-450/NADPH-P450 reductase 2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835261 ID=CF835261; Name=CF835261; organism=Citrus sinensis; type=EST; length=711bp
ACACACTTGCTCGCCAGAAGAGCGGTGGTACCAACCCATTACTTTGTTGA
TGCTTTGCTTACACTGCAAGAAAAATATGACCTAAGTGAAGACACTATCA
TTGGACTCCTCTGGGACATGATCACAGCGGGCATGGACACAACTGCAATC
TCAACAGAATGGGGAATGGCCGAGCTCATTAAGAACCCTAGAGTGCAACA
AAAGGCTCAAGAGGAACTAGACCGTGTGATAGGATTTGAACGTGTGATGA
CGGAAACCGATTTCTCAAACCTTCCTTACTTACAAGCTGTAGCCAAGGAG
GCTCTAAGGTTGCACCCACCAACTCCCCTGATGCTTCCTCACCGTGCCAA
TGCCAATGTTAAGATAGGTGGCTACGATGTTCCTAAGGGATCAAACATTC
ACGTCAACGTATGGGCAGTAGCTCGGGATCCTGCAGTCTGGAAGGACCCG
TTAGAGTTCCGGCCTGAGCGGTTCTTCGAGGAGGATGTGGACATGAAAGG
CCATGATTTTAGGCTACTACCATTTGGTGCTGGTAGGAGAGTGTGCCCAG
GTGCACAACTTGGTATAAATTTGGTCACGTCAATGTTGGGGCATCTATTA
CACCATTTTGCTTGGGCGCCACCAGAGGGAGTGAAGCCAGAGGAAATTGA
CATGTCAGAAAATCCTGGATTGGTTACATTTATGAAGACACCAGTACACG
CTGTGCCAACT
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