CF835267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: THIO_RABIT (Thioredoxin OS=Oryctolagus cuniculus GN=TXN PE=1 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.370e-18 Identity = 42/102 (41.18%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 131 VSLVTTKDIWDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKV 436 V + +K + + + A K+V+ +FSATWCGPC+MI PFF LSEK+ +++F+ VDVD+ + + ++K PTF F K GQ+V + GANK +L+ + Sbjct: 2 VKQIESKSAFQEVLDSAGD--KLVVVDFSATWCGPCKMIKPFFHALSEKFNNVVFIEVDVDDCKDIAAECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 101
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: THIO_OPHHA (Thioredoxin OS=Ophiophagus hannah GN=TXN PE=3 SV=3) HSP 1 Score: 92.4337 bits (228), Expect = 2.370e-18 Identity = 39/89 (43.82%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 173 SEASKEG-KIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKV 436 +E S G K+++ +FSATWCGPC+MI PFF + EKYP ++F+ +DVD+ + ++ D+K PTF F K+ ++V + GANK +L++ + Sbjct: 13 AELSNAGSKLIVVDFSATWCGPCKMIKPFFHSMVEKYPDVVFIEIDVDDAQDVASHCDVKCMPTFQFYKNNEKVHEFSGANKEKLEEAI 101
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.095e-18 Identity = 36/94 (38.30%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 158 WDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVA 439 W +E + K+++ +FSA+WCGPCRMI P +++K+ + F+ +DVDEL + + +++ A PTF +K G+++++++GA K EL+KKV+ Sbjct: 36 WQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVS 129
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: THIO_CHICK (Thioredoxin OS=Gallus gallus GN=TXN PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.095e-18 Identity = 38/85 (44.71%), Postives = 61/85 (71.76%), Query Frame = 2 Query: 194 KIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVAAAV 448 K+V+ +FSATWCGPC+MI PFF L +K+ ++F+ +DVD+ + +T D+K PTF F K+G++V + GANK +L++ + + V Sbjct: 21 KLVVVDFSATWCGPCKMIKPFFHSLCDKFGDVVFIEIDVDDAQDVATHCDVKCMPTFQFYKNGKKVQEFSGANKEKLEETIKSLV 105
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: THIO_ICTPU (Thioredoxin OS=Ictalurus punctatus GN=txn PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17 Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 194 KIVIANFSATWCGPCRMIAPFFSELS--EKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKV 436 K+V+ +F+ATWCGPC+ I P F LS E Y +++FL VDVD+ + S+ DIK PTF F K+GQ++D+ GAN+ L++K+ Sbjct: 21 KLVVVDFTATWCGPCQKIGPIFETLSKSEDYQNVVFLKVDVDDAADVSSHCDIKCMPTFHFYKNGQKIDEFSGANEQTLKQKI 103
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: THIO_COPCM (Thioredoxin OS=Coprinus comatus PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.422e-17 Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 2 Query: 167 KMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKY--PSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKV 436 + ++ + GKI+I +F ATWCGPCR+I+P F + SEKY +++F VDVD + S I+A PTF KDGQ++D+LVGAN L+ V Sbjct: 10 EFNKLTNSGKIIIIDFWATWCGPCRVISPIFEKFSEKYGANNIVFAKVDVDTASDISEEAKIRAMPTFQVYKDGQKIDELVGANPTALESLV 101
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRX1_YEAST (Thioredoxin-1 OS=Saccharomyces cerevisiae GN=TRX1 PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16 Identity = 38/92 (41.30%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 167 KMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVAA 442 + A + K+V+ +F ATWCGPC+MIAP + SE+YP F +DVDEL + + ++ A PT K+G++V K+VGAN +++ +AA Sbjct: 10 EFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVAKVVGANPAAIKQAIAA 101
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TXND2_HUMAN (Thioredoxin domain-containing protein 2 OS=Homo sapiens GN=TXNDC2 PE=1 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 2.897e-16 Identity = 47/118 (39.83%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 86 DEEDGEHPVEFAGGNVSLVTTKDIWDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVA 439 +EE E P G V ++ +K+ ++ + EA + ++V +FSATWCGPCR I PFF LS K+ ++FL VD D E I PTF F K ++VD+L GA K +L+ +A Sbjct: 438 EEETMEFP---EGDKVKVILSKEDFEASLKEAGE--RLVAVDFSATWCGPCRTIRPFFHALSVKHEDVVFLEVDADNCEEVVRECAIMCVPTFQFYKKEEKVDELCGALKEKLEAVIA 550
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRX1_SCHPO (Thioredoxin-1 OS=Schizosaccharomyces pombe GN=trx1 PE=2 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16 Identity = 35/85 (41.18%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 188 EGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVAA 442 + K+V+ +F ATWCGPC+ IAP F + S Y F+ VDVD+L E + + A P+FF K+G++++++VGAN +L+ + A Sbjct: 17 QDKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEIAAEAGVHAMPSFFLYKNGEKIEEIVGANPAKLEASIKA 101
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: THIO1_CAEEL (Thioredoxin-1 OS=Caenorhabditis elegans GN=trx-1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.454e-16 Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 194 KIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVAAAVDS 454 KI+I +F ATWCGPC+ IAP + EL+ + ++F VDVDE + + +D+K PTF F K+G ++ L G + EL++KV V + Sbjct: 28 KIIILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVEDELRQKVLEHVSA 114 The following BLAST results are available for this feature:
BLAST of CF835267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835267 ID=CF835267; Name=CF835267; organism=Citrus sinensis; type=EST; length=689bpback to top |