CF835271

Overview
NameCF835271
Unique NameCF835271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length463
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig989 contig Csv1_Contig989:23..485. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835271 vs. ExPASy Swiss-Prot
Match: METE_DICDI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Dictyostelium discoideum GN=metE PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 9.867e-11
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = -2 
Query:  301 IPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 462
            IPS E++ DR+ +ML  L TN+LW+NPDCGLKTR+    + AL NMV  AK  R
Sbjct:  765 IPSVEDMKDRVEQMLKYLSTNLLWINPDCGLKTREPETTRLALINMVKVAKQFR 818
The following BLAST results are available for this feature:
BLAST of CF835271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
METE_DICDI9.867e-1155.565-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835271 ID=CF835271; Name=CF835271; organism=Citrus sinensis; type=EST; length=463bp
TTTTTTTTTTTTTTTTTAATGCCAAACCAGTAAAGGTATTCCATCCATTT
ACGGCCACTGATAGCAAGCCAGGGCCTTTAAAAACAGAAAATACAAGCAA
AGAAAAATAGAAGCCGATTGCTCAAAAGTGCATAATATGCCTACGGAAAA
TTTTCATCACATCACGACCCACAGTTATTCGAATAGGTAGGTAATAAGAC
AGGAATTTTCTTTCTTTGTTTAAAGTGAAAAAAAAATCAATGGCTCAGGA
AGTATCCCTCCAATCTCTGGAACCACTCACTTGGCACTGGCAAGCTGGGT
GCGGAGTAGCTTGGCAGCAGCAACCATGTTTGAGAGGGCTGGCTTCACCT
CAGTGTACTTGCGAGTCTTAAGACCACAGTCAGGGTTAACCCACAAAATG
TTGGTTTCTAGCACAGCAAGCATCTTGTTGATTCTGTCAGCAATTTCTTC
AGTTGATGGTATT
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