CF835272

Overview
NameCF835272
Unique NameCF835272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_VIBPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio parahaemolyticus GN=metE PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.027e-52
Identity = 97/164 (59.15%), Postives = 125/164 (76.22%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P+I+  D+ R K +TV WS+ AQS+T++ MKGMLTGPVTIL W+F R D  R E   Q+ALA++DEV DL+ AGIN+IQIDE A+REGLPL+K +H  YL+WAV++F+I+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F E
Sbjct:  521 CVKPAIVVADIEREKPITVEWSTYAQSLTSKQMKGMLTGPVTILCWTFPREDITRQEIAQQLALALRDEVSDLQDAGINIIQIDEPAIREGLPLKKRDHKAYLEWAVNAFKISAASAKPETQIHTHMCYSEFNEIIDSVAALDADVITIETSRSNMELLKAFEE 684          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_VIBCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio cholerae GN=metE PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.027e-52
Identity = 98/164 (59.76%), Postives = 124/164 (75.61%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P+I+  D+ R K +TV WS+ AQS+T++ MKGMLTGPVTIL W+F R D  R E   Q+ALA++DEV DL+ AGIN+IQIDE A+REGLPL+K +H  YLDWAV +F+I+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F E
Sbjct:  521 CVKPAIVVADIEREKPITVEWSTYAQSLTSKQMKGMLTGPVTILCWTFPREDISRQEIAQQLALALRDEVADLQDAGINIIQIDEPAIREGLPLKKRDHQTYLDWAVQAFKISAGSARPETQIHTHMCYSEFNEIIESVAALDADVITIETSRSNMELLKAFEE 684          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_KLEP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=metE PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.027e-52
Identity = 101/162 (62.35%), Postives = 121/162 (74.69%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P ++ GDVSRP+A+TV W+  AQS+TA+P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPL++S+   YL W V +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F
Sbjct:  516 CVKPPVVIGDVSRPQAITVDWAKYAQSLTAKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLKRSDWDAYLQWGVEAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESF 677          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BAUCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metE PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.027e-52
Identity = 104/164 (63.41%), Postives = 122/164 (74.39%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P II GD+SRPK +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPL+ S    YL WAV +FR+     ++ TQIHTHMCYS FNDI+ SII MDADVITIE SRS+ KLL  F++
Sbjct:  521 CVKPPIIIGDISRPKPITVEWAWYAQSLTQKPVKGMLTGPVTILCWSFPREDLDRKTIARQIALALRDEVIDLENAGIGIIQIDEPALREGLPLKYSAWKEYLTWAVEAFRLNAAVAKNNTQIHTHMCYSEFNDIMDSIIAMDADVITIETSRSNMKLLDTFKQ 684          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STRGG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metE PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.341e-52
Identity = 100/168 (59.52%), Postives = 128/168 (76.19%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYG 509
            V P ++ GD+SRP+ MTV W++ AQS+TARP+KGMLTGPVT+L WSFVR+DQP  +T  Q+ALA++DEV DLE  G +VIQ+DE ALRE LPLR +EHA YL+WA  SFRI   GV+  TQIHTHMCY+ F DI+ +I D+DADVI++E +RS    + V RE   +G
Sbjct:  532 VRPPVLAGDISRPEPMTVRWTTYAQSLTARPVKGMLTGPVTMLAWSFVRDDQPLGDTARQVALALRDEVNDLEANGTSVIQVDEPALRETLPLRAAEHAAYLEWATESFRIATSGVRPDTQIHTHMCYAEFGDIVQAIDDLDADVISLEAARSH---MQVARELAAHG 696          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_ENT38 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sp. (strain 638) GN=metE PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.341e-52
Identity = 102/164 (62.20%), Postives = 121/164 (73.78%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P ++ GDVSRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPLR+S+   YL W V +FRI     ++ TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E
Sbjct:  516 CVKPPVVIGDVSRPEAITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVTRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKNDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE 679          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_CITK8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=metE PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.341e-52
Identity = 102/164 (62.20%), Postives = 120/164 (73.17%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P ++ GDVSRP+ +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E
Sbjct:  516 CVKPPVVIGDVSRPEPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE 679          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_SHISS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella sonnei (strain Ss046) GN=metE PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.752e-52
Identity = 103/164 (62.80%), Postives = 119/164 (72.56%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P I+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E
Sbjct:  516 CVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE 679          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_SHIDS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=metE PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.752e-52
Identity = 103/164 (62.80%), Postives = 119/164 (72.56%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P I+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E
Sbjct:  516 CVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE 679          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_SHIBS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=metE PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 1.752e-52
Identity = 103/164 (62.80%), Postives = 119/164 (72.56%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P I+ GDVSRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPLR+S+   YL W V +FRI     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E
Sbjct:  516 CVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE 679          
The following BLAST results are available for this feature:
BLAST of CF835272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_VIBPA1.027e-5259.155-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBCH1.027e-5259.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_KLEP71.027e-5262.355-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BAUCH1.027e-5263.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGG1.341e-5259.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENT381.341e-5262.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CITK81.341e-5262.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHISS1.752e-5262.805-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIDS1.752e-5262.805-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIBS1.752e-5262.805-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835272 ID=CF835272; Name=CF835272; organism=Citrus sinensis; type=EST; length=513bp
GCTGTGTGAACCCATCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCT
ATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAAT
GAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCA
GAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATC
AAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAAT
TGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATG
CTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGT
GTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAA
CGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCATTG
AGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTC
AAGTATGGTGCTG
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