CF835272

Overview
NameCF835272
Unique NameCF835272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BUCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=metE PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.136e-51
Identity = 100/164 (60.98%), Postives = 126/164 (76.83%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P II GDVSR K +++ W   AQ++T++P+KGMLTGPVTIL WSFVR D  +     QIALA++DEV DLE++G+ +IQIDE ALREGLPLR S    YL WAV SF++++ GV D TQIHTHMCY  FNDI+++I+ +DADVITIE SRSD +LL  F+E
Sbjct:  518 CVKPPIIIGDVSRSKPISLDWIKYAQTLTSKPVKGMLTGPVTILLWSFVREDLSKKIISRQIALALRDEVLDLEQSGVKIIQIDEPALREGLPLRLSLRNEYLSWAVDSFKLSSSGVCDETQIHTHMCYCEFNDIMNAIVLLDADVITIETSRSDMELLEFFKE 681          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_ENTS8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=metE PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.937e-51
Identity = 99/164 (60.37%), Postives = 119/164 (72.56%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P ++ GD+SRP  +TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE AGI +IQIDE ALREGLPL++S+   YL W V +FR+     +D TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E
Sbjct:  516 CVKPPVVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLKRSDWDAYLAWGVEAFRLNAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE 679          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_PHOPR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Photobacterium profundum GN=metE PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.530e-51
Identity = 97/164 (59.15%), Postives = 122/164 (74.39%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P++I  D+ R K MTV W++ AQS+T + +KGMLTGPVTIL W+F R D PR     QIALA++DEV DL+ AGI +IQIDE A+REGLPL++S+   YLDWAV++F+I+    +  TQIHTHMCYS FN II S+  +DADVITIE SRSD +LL  F E
Sbjct:  523 CVKPAVIVSDIYRAKPMTVEWTTYAQSLTDKLVKGMLTGPVTILGWTFPREDLPRQGIANQIALALRDEVSDLQAAGIKIIQIDEPAIREGLPLKESQWQAYLDWAVNAFKISAASAEPQTQIHTHMCYSEFNHIIKSVAALDADVITIETSRSDMELLKAFEE 686          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_VIBFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain MJ11) GN=metE PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.304e-51
Identity = 93/164 (56.71%), Postives = 121/164 (73.78%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P+I+  D+ R   +TV W+  AQS+T + MKGMLTGPVTIL W+F R D  R E   Q+AL ++DEV DL++AGIN+IQIDE A+REGLP++KS+   YLDWAV +F+I+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F +
Sbjct:  531 CVKPAIVVADIEREAPITVSWTQYAQSLTTKQMKGMLTGPVTILGWTFPREDITRKEIAQQLALVLRDEVSDLQQAGINIIQIDEPAIREGLPIKKSDQKAYLDWAVEAFKISAASAKSETQIHTHMCYSEFNEIIESVAALDADVITIETSRSNMELLKAFED 694          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_VIBF1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=metE PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.304e-51
Identity = 93/164 (56.71%), Postives = 121/164 (73.78%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P+I+  D+ R   +TV W+  AQS+T + MKGMLTGPVTIL W+F R D  R E   Q+AL ++DEV DL++AGIN+IQIDE A+REGLP++KS+   YLDWAV +F+I+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F +
Sbjct:  531 CVKPAIVVADIEREAPITVSWTQYAQSLTTKQMKGMLTGPVTILGWTFPREDITRKEIAQQLALVLRDEVSDLQQAGINIIQIDEPAIREGLPIKKSDQKAYLDWAVEAFKISAASAKSETQIHTHMCYSEFNEIIESVAALDADVITIETSRSNMELLKAFED 694          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_VIBHB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metE PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 5.636e-51
Identity = 95/162 (58.64%), Postives = 122/162 (75.31%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P+I+  D+ R K +TV WS+ AQS+T++ MKGMLTGPVTIL W+F R D  R E   Q+ALA++DEV DL+ +GIN+IQIDE A+REGLPL+K +H  YL WAV +F+I+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F
Sbjct:  521 CVKPAIVVADIEREKPITVEWSTYAQSLTSKQMKGMLTGPVTILCWTFPREDITRKEIAEQLALALRDEVSDLQDSGINIIQIDEPAIREGLPLKKRDHDAYLQWAVDAFKISAASAKPETQIHTHMCYSEFNEIIDSVAALDADVITIETSRSNMELLKAF 682          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STRCO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces coelicolor GN=metE PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 5.636e-51
Identity = 93/153 (60.78%), Postives = 121/153 (79.08%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 464
            V P I+ GD+SRP+ MTV W++ AQS+T +P+KGMLTGPVT+L WSFVR+DQP  +T  Q+ALA++DEV DLE AG +VIQ+DE ALRE LPLR ++H  YL WA  +FR+T  GV+  TQIHTHMCY+ F DI+ +I D+DADVI++E +RS
Sbjct:  532 VRPPILAGDISRPEPMTVRWTTYAQSLTEKPVKGMLTGPVTMLAWSFVRDDQPLGDTARQVALALRDEVNDLEAAGTSVIQVDEPALRETLPLRAADHTAYLAWATEAFRLTTSGVRPDTQIHTHMCYAEFGDIVQAIDDLDADVISLEAARS 684          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_MYCLE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium leprae GN=metE PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 5.636e-51
Identity = 95/159 (59.75%), Postives = 123/159 (77.36%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            CV P I+YGDVSRP  MT+ W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI +IQ+DE ALRE LPLR+++   YL WAV +FR+   GV D+TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L
Sbjct:  522 CVRPPILYGDVSRPHPMTIEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQSAGIAIIQVDEPALRELLPLRRADQDEYLCWAVKAFRLATSGVADSTQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVL 680          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_LACLS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=metE PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 7.361e-51
Identity = 98/164 (59.76%), Postives = 127/164 (77.44%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P I++GD++RP+AMTV WS+ AQS T++P+KGMLTGPVTILNWSF R D    E+  Q+ALA+++EV DLEKAGI +IQIDEAALRE LPLR+S+ ++ YLDW++ +FR+ +  V+  TQIHTHMCYS F DII SI  MDADVI+ E SRS   ++   +
Sbjct:  513 CVKPPIVWGDITRPQAMTVRWSAYAQSQTSKPVKGMLTGPVTILNWSFPREDISLKESTLQLALAVQEEVLDLEKAGIKIIQIDEAALREKLPLRRSDWYSEYLDWSIPAFRLVHSKVKAETQIHTHMCYSEFEDIIPSIDAMDADVISFEASRSQLSIIDALK 676          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_LACLM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metE PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 9.613e-51
Identity = 97/164 (59.15%), Postives = 127/164 (77.44%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P I++GD++RP+AMTV WS+ AQS T++P+KGMLTGPVTILNWSF R D    E+  Q+ALA+++EV DLEK+G+ +IQIDEAALRE LPLR+S+ ++ YLDWA+ +FR+ +  V+  TQIHTHMCYS F DII SI  MDADVI+ E SRS   ++   +
Sbjct:  513 CVKPPIVWGDITRPQAMTVRWSAYAQSQTSKPVKGMLTGPVTILNWSFPREDISLKESTLQLALAVQEEVLDLEKSGVKIIQIDEAALREKLPLRRSDWYSEYLDWAIPAFRLVHSKVKAETQIHTHMCYSEFEDIIPSIDAMDADVISFEASRSQLSIIDALK 676          
The following BLAST results are available for this feature:
BLAST of CF835272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_BUCBP1.136e-5160.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENTS81.937e-5160.375-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PHOPR2.530e-5159.155-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBFM3.304e-5156.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBF13.304e-5156.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHB5.636e-5158.645-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRCO5.636e-5160.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCLE5.636e-5159.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLS7.361e-5159.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLM9.613e-5159.155-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835272 ID=CF835272; Name=CF835272; organism=Citrus sinensis; type=EST; length=513bp
GCTGTGTGAACCCATCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCT
ATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAAT
GAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCA
GAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATC
AAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAAT
TGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATG
CTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGT
GTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAA
CGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCATTG
AGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTC
AAGTATGGTGCTG
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