CF835272

Overview
NameCF835272
Unique NameCF835272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BIFLI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metE PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 9.613e-51
Identity = 103/165 (62.42%), Postives = 120/165 (72.73%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P I++GDVSR   +TV WS+ AQS T   MKGMLTGPVTILNWS+ R D    E   Q+ALAI+DEV DLE AGI +IQIDEAALRE LPLRKS+ HA YLDWA+ +FR+ +  V+ TTQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +
Sbjct:  526 CVKPPIVWGDVSRANPITVEWSAYAQSKTDHVMKGMLTGPVTILNWSWPREDITHEEQTKQLALAIRDEVLDLEAAGIKIIQIDEAALREKLPLRKSDWHAKYLDWAIPAFRLVHSAVKPTTQIHTHMCYSEFNDIIRDIDAMDADVISFEASRGDLVVLDAIHD 690          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_VIBHA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi GN=metE PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.256e-50
Identity = 95/164 (57.93%), Postives = 121/164 (73.78%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P+I+  D+ R K +TV WS+ AQS+T + MKGMLTGPVTIL W+F R D  R     Q+ALA++DEV DL++AGIN+IQIDE A+REGLPL+K +H  YL WAV +F+I     +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F +
Sbjct:  521 CVKPAIVVADIEREKPITVEWSTYAQSLTNKQMKGMLTGPVTILCWTFPREDITRKAIADQLALALRDEVSDLQQAGINIIQIDEPAIREGLPLKKRDHKAYLQWAVDAFKIAAASAKPETQIHTHMCYSEFNEIIDSVAALDADVITIETSRSNMELLKAFED 684          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BUCAP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metE PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.640e-50
Identity = 101/163 (61.96%), Postives = 122/163 (74.85%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P II GDVSR K +TV WS  AQS+T +P+K MLTGPVTIL WSF R D    +   QI LA++DEV DLEK  I +IQIDE ALREGLPLRKS    YL WAV +FR+++ GV++TTQIHTHMCY  F+DI+H+I  +DADVITIE +RSD +LL  F+
Sbjct:  515 CVKPPIIIGDVSRLKPITVKWSKYAQSLTDKPVKAMLTGPVTILFWSFPREDISLEKIAKQIGLALRDEVLDLEKEKIEIIQIDEPALREGLPLRKSLWNEYLSWAVDAFRLSSSGVKNTTQIHTHMCYCEFHDIMHAISFLDADVITIETARSDMELLKSFK 677          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BIFLO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum GN=metE PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.640e-50
Identity = 104/165 (63.03%), Postives = 119/165 (72.12%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P I++GDVSR   +TV WS+ AQS T   MKGMLTGPVTILNWS+ R D    E   Q+ALAI+DEV DLE AGI VIQIDEAALRE LPLRKS+ H  YLDWAV +FR+ +  V+ TTQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +
Sbjct:  526 CVKPPIVWGDVSRANPITVEWSAYAQSKTDHVMKGMLTGPVTILNWSWPREDITHEEQTKQLALAIRDEVLDLEAAGIKVIQIDEAALREKLPLRKSDWHVKYLDWAVPAFRLVHSAVKPTTQIHTHMCYSEFNDIIRDIDAMDADVISFEASRGDLVVLDAIHD 690          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BIFLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=metE PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.640e-50
Identity = 104/165 (63.03%), Postives = 119/165 (72.12%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P I++GDVSR   +TV WS+ AQS T   MKGMLTGPVTILNWS+ R D    E   Q+ALAI+DEV DLE AGI VIQIDEAALRE LPLRKS+ H  YLDWAV +FR+ +  V+ TTQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +
Sbjct:  526 CVKPPIVWGDVSRANPITVEWSAYAQSKTDHVMKGMLTGPVTILNWSWPREDITHEEQTKQLALAIRDEVLDLEAAGIKVIQIDEAALREKLPLRKSDWHVKYLDWAVPAFRLVHSAVKPTTQIHTHMCYSEFNDIIRDIDAMDADVISFEASRGDLVVLDAIHD 690          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BACLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metE PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.640e-50
Identity = 96/154 (62.34%), Postives = 119/154 (77.27%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 464
            CV P +IYGDV   + MTV  +  AQS+T++ +KGMLTGPVTILNWSF R D PR E  +QIA A++ EVE LEKAGI +IQ+DE ALREGLPL++ +   YL WA  +FR++   V+DTTQIHTHMCYSNF DI+ +I D+DADVITIE+SRS
Sbjct:  520 CVRPPVIYGDVEFKEPMTVKETVYAQSLTSKKVKGMLTGPVTILNWSFARYDLPRKEIAFQIACALRKEVEALEKAGIQIIQVDEPALREGLPLKERDWDEYLKWAAEAFRLSTSSVEDTTQIHTHMCYSNFEDIVDAIEDLDADVITIEHSRS 673          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BIFAA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=metE PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.797e-50
Identity = 102/165 (61.82%), Postives = 120/165 (72.73%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P I++GDVSR   +TV WS+ AQS T   MKGMLTGPVTILNWS+ R D    +   Q+ALAI+DEV DLEKAGI VIQIDEAALRE LPLRK++ H  YLDWA+ +FR+ +  V+ TTQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +
Sbjct:  527 CVKPPIVWGDVSRANPITVEWSAYAQSRTDHVMKGMLTGPVTILNWSWPREDITHEQQTQQLALAIRDEVLDLEKAGIKVIQIDEAALREKLPLRKTDWHKKYLDWAIPAFRLVHSAVKPTTQIHTHMCYSEFNDIIKDIDAMDADVISFEASRGDLVVLDAIHD 691          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_LACLA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. lactis GN=metE PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 3.653e-50
Identity = 99/164 (60.37%), Postives = 125/164 (76.22%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P I++ DV+RP+AMTV WS+ AQS T++P+KGMLTGPVTILNWSF R D     +  Q+ALA+++EV DLEKAGI +IQIDEAALRE LPLRKS+ +  YLDWA+ +FR+ +  V+  TQIHTHMCYS F DII SI  MDADVI+ E SRS+  ++   +
Sbjct:  515 CVKPPIVWTDVTRPEAMTVRWSAYAQSQTSKPVKGMLTGPVTILNWSFPREDISLKASTLQLALAVQEEVLDLEKAGIKIIQIDEAALREKLPLRKSDWYKEYLDWAIPAFRLVHSKVKPETQIHTHMCYSEFEDIIPSIDAMDADVISFEASRSELSIIDALK 678          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_HERA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=metE PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 4.771e-50
Identity = 97/160 (60.62%), Postives = 122/160 (76.25%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLS 482
            CV P +I GDV R  A++V  ++ AQS+T RP+KGMLTGPVT+L WSFVR+D PR     QI LA++DEV DLE AGIN+IQIDE A REGLPLR+++   YLDWAV +FRI     + +TQIHTHMCYS+FNDII +I  +DADVI+IE++RS   LL+
Sbjct:  510 CVRPPVIAGDVYRTAALSVAETAYAQSLTKRPVKGMLTGPVTMLQWSFVRDDLPRSAVAAQIGLALRDEVTDLEAAGINIIQIDEPAFREGLPLRRNDWQNYLDWAVRAFRIATSDAKPSTQIHTHMCYSDFNDIIAAIAALDADVISIEDARSAGSLLA 669          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_CAMJR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni (strain RM1221) GN=metE PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 4.771e-50
Identity = 100/164 (60.98%), Postives = 123/164 (75.00%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P +I+GDVSR K +T+ WS  AQS++ + +KGMLTGPVTILNWSF R D    E+  QIALAI+DEV DLE AGI +IQIDEAALRE LPLRKS+ H+ YLDWA+ +F + + GV+  TQIHTHMCYS F+DI+  I  MDADVI+ E SRS+  LL   +
Sbjct:  515 CVKPPVIWGDVSRTKPITLAWSKFAQSLSQKIVKGMLTGPVTILNWSFPREDISLKESTEQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPAFNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLK 678          
The following BLAST results are available for this feature:
BLAST of CF835272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_BIFLI9.613e-5162.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHA1.256e-5057.935-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCAP1.640e-5061.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLO1.640e-5063.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLD1.640e-5063.035-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACLD1.640e-5062.345-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFAA2.797e-5061.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLA3.653e-5060.375-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_HERA24.771e-5060.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJR4.771e-5060.985-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835272 ID=CF835272; Name=CF835272; organism=Citrus sinensis; type=EST; length=513bp
GCTGTGTGAACCCATCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCT
ATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAAT
GAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCA
GAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATC
AAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAAT
TGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATG
CTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGT
GTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAA
CGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCATTG
AGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTC
AAGTATGGTGCTG
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