CF835272

Overview
NameCF835272
Unique NameCF835272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_CAMJE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni GN=metE PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 4.771e-50
Identity = 100/164 (60.98%), Postives = 123/164 (75.00%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P +I+GDVSR K +T+ WS  AQS++ + +KGMLTGPVTILNWSF R D    E+  QIALAI+DEV DLE AGI +IQIDEAALRE LPLRKS+ H+ YLDWA+ +F + + GV+  TQIHTHMCYS F+DI+  I  MDADVI+ E SRS+  LL   +
Sbjct:  515 CVKPPVIWGDVSRTKPITLAWSKFAQSLSQKIVKGMLTGPVTILNWSFPREDISLKESTEQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPAFNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLK 678          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_CAMJ8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=metE PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 4.771e-50
Identity = 100/164 (60.98%), Postives = 123/164 (75.00%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P +I+GDVSR K +T+ WS  AQS++ + +KGMLTGPVTILNWSF R D    E+  QIALAI+DEV DLE AGI +IQIDEAALRE LPLRKS+ H+ YLDWA+ +F + + GV+  TQIHTHMCYS F+DI+  I  MDADVI+ E SRS+  LL   +
Sbjct:  515 CVKPPVIWGDVSRTKPITLAWSKFAQSLSQKIVKGMLTGPVTILNWSFPREDISLKESTEQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPAFNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLK 678          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_SCHPO (Probable 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Schizosaccharomyces pombe GN=SPAC9.09 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.231e-50
Identity = 99/161 (61.49%), Postives = 119/161 (73.91%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSV 485
            CV P II GDV RP  MTV  S  AQS+T++PMKGMLT P+TIL WSF R+D        QIAL ++DEV DLEKAGI VIQ DE ALREGLPLR++E   YL WA+ +FR+    VQD TQIH+H CYS+FNDI  +I  +DADV++IENS+SD KLL+V
Sbjct:  527 CVRPPIIVGDVYRPAPMTVKESQYAQSITSKPMKGMLTAPITILRWSFPRDDVHDSVQAQQIALGLRDEVLDLEKAGIKVIQCDEPALREGLPLRRAEWDEYLKWAIDAFRLATAAVQDDTQIHSHFCYSDFNDIFDAIQRLDADVVSIENSKSDMKLLNV 687          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_CAMJJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=metE PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.231e-50
Identity = 100/164 (60.98%), Postives = 122/164 (74.39%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P +I+GDVSR K +T+ WS  AQS++ + +KGMLTGPVTILNWSF R D    E+  QIALAI+DEV DLE AGI +IQIDEAALRE LPLRKS+ H+ YLDWA+ +F + + GV+  TQIHTHMCYS F DI+  I  MDADVI+ E SRS+  LL   +
Sbjct:  515 CVKPPVIWGDVSRTKPITLAWSKFAQSLSQKIVKGMLTGPVTILNWSFPREDISLKESTEQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPAFNLVHSGVKAKTQIHTHMCYSEFGDILKEIDAMDADVISFEASRSNLSLLDTLK 678          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STRAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces avermitilis GN=metE PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 8.138e-50
Identity = 93/153 (60.78%), Postives = 120/153 (78.43%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 464
            V P ++ GD+SRP+ MTV W++ AQS+T RP+KGMLTGPVT+L WSFVR+DQP  ET  Q+ALA++DEV DLE AG +VIQ+DE ALRE LPLR ++   YL WA  +FR+T  GV+  TQIHTHMCY+ F DI+ +I D+DADVI++E +RS
Sbjct:  532 VRPPVLAGDISRPEPMTVPWTTYAQSLTDRPVKGMLTGPVTMLAWSFVRDDQPLGETARQVALALRDEVGDLEAAGTSVIQVDEPALRETLPLRAADRPAYLAWATEAFRLTTGGVRPDTQIHTHMCYAEFGDIVQAIDDLDADVISLEAARS 684          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BACCN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=metE PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 8.138e-50
Identity = 94/164 (57.32%), Postives = 121/164 (73.78%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P II+GDV+    MTV  +  AQS+T + +KGMLTGPVTILNWSFVRND PR E CYQIALA++ E+E LE +GI +IQ+DE ALREG+PL++ +   Y++WAV SFR+    V + TQIHTHMCYSNF DI+ +I  +DADVI+IE SRS  + +    +
Sbjct:  520 CVKPPIIFGDVAFISDMTVKETVYAQSLTNKVVKGMLTGPVTILNWSFVRNDLPRKEVCYQIALALRHEIERLESSGIRIIQVDEPALREGMPLKEKDWDSYIEWAVQSFRLATASVANETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFIHTLEQ 683          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_MYCPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium paratuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.388e-49
Identity = 95/159 (59.75%), Postives = 121/159 (76.10%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            CV P I+YGDV R   MTV W S AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI VIQ+DE ALRE LPLR+++   YL WAV +FR+   GV D+TQIHTH+CYS F ++I +I D+DADV ++E +RS  ++L
Sbjct:  518 CVRPPILYGDVVRTHPMTVEWISYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQAAGIAVIQVDEPALRELLPLRRADQDEYLRWAVGAFRLATSGVADSTQIHTHLCYSEFGEVIGAIADLDADVTSLEAARSHMEVL 676          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BACP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=metE PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.813e-49
Identity = 97/154 (62.99%), Postives = 118/154 (76.62%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 464
            CV P IIYGDV     MTV  +  AQS+T + +KGMLTGPVTILNWSF R D  R +  +QIA A++ EVE LE+AGI VIQ+DE ALREGLPL++S+ A YL+WA  SFR++   VQ+ TQIHTHMCYSNF DI+ +I D+DADVITIE+SRS
Sbjct:  520 CVKPPIIYGDVEFTAPMTVKETVYAQSLTEKKVKGMLTGPVTILNWSFPRTDISRKDIAFQIAFALRKEVEALEEAGIQVIQVDEPALREGLPLKESDWADYLNWAAESFRLSTSSVQNETQIHTHMCYSNFEDIVDTIEDLDADVITIEHSRS 673          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_RHOSR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhodococcus sp. (strain RHA1) GN=metE PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.368e-49
Identity = 92/159 (57.86%), Postives = 120/159 (75.47%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            CV P I+YGDV R   MTV W + AQS+T RP+KGMLTGPVTIL WSFVR+DQP  ++  Q+ALAI+DE  DL+ AGI ++Q+DE ALRE LPLR ++   YLDW+V +FR+   GV D+TQIHTH+CYS F ++I +I  +DADV +IE +RS  ++L
Sbjct:  515 CVRPPILYGDVRRSNPMTVEWITYAQSLTQRPVKGMLTGPVTILAWSFVRDDQPLADSANQVALAIRDETVDLQGAGIRIVQVDEPALRELLPLRAADQPGYLDWSVGAFRLATSGVSDSTQIHTHLCYSEFGEVIEAIARLDADVTSIEAARSHMEVL 673          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_MYCA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium avium (strain 104) GN=metE PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.368e-49
Identity = 94/159 (59.12%), Postives = 121/159 (76.10%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            CV P I+YGDV R   MTV W + AQS+T +P+KGMLTGPVTIL WSFVR+DQP  +T  Q+ALAI+DE  DL+ AGI VIQ+DE ALRE LPLR+++   YL WAV +FR+   GV D+TQIHTH+CYS F ++I +I D+DADV ++E +RS  ++L
Sbjct:  518 CVRPPILYGDVVRTHPMTVEWITYAQSLTDKPVKGMLTGPVTILAWSFVRDDQPLADTANQVALAIRDETVDLQAAGIAVIQVDEPALRELLPLRRADQEEYLRWAVGAFRLATSGVADSTQIHTHLCYSEFGEVIGAIADLDADVTSLEAARSHMEVL 676          
The following BLAST results are available for this feature:
BLAST of CF835272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_CAMJE4.771e-5060.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJ84.771e-5060.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SCHPO6.231e-5061.49Probable 5-methyltetrahydropteroyltriglutamate--ho... [more]
METE_CAMJJ6.231e-5060.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRAW8.138e-5060.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACCN8.138e-5057.325-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCPA1.388e-4959.755-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACP21.813e-4962.995-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHOSR2.368e-4957.865-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCA12.368e-4959.125-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835272 ID=CF835272; Name=CF835272; organism=Citrus sinensis; type=EST; length=513bp
GCTGTGTGAACCCATCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCT
ATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAAT
GAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCA
GAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATC
AAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAAT
TGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATG
CTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGT
GTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAA
CGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCATTG
AGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTC
AAGTATGGTGCTG
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