CF835272

Overview
NameCF835272
Unique NameCF835272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_COREF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium efficiens GN=metE PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.368e-49
Identity = 94/163 (57.67%), Postives = 122/163 (74.85%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P I++G V+RP+ MTV W + AQS+T RP+KGMLTGPVTIL WSFVR+DQP   T  QIALA+++E+ DL  AG  +IQ+DE A+RE LPLR++E   Y  WAV +FR++     D  QIHTHMCYS FN++I SIID+DADV TIE +RSD ++L+  +
Sbjct:  508 CVRPPILFGTVTRPEPMTVRWFAHAQSLTNRPVKGMLTGPVTILAWSFVRDDQPLAVTADQIALALREEITDLVDAGAKIIQVDEPAIRELLPLRRAEQDAYTRWAVGAFRLSTSTAPDHVQIHTHMCYSEFNELIRSIIDLDADVTTIEAARSDMQVLAALK 670          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_THEYD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=metE PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.039e-49
Identity = 97/168 (57.74%), Postives = 123/168 (73.21%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKY 506
            CV P +IYGDV R KA+TV  +  AQS+T RP+KG++TG VTIL WS+ R D  R E  YQIALA+K+EV +LEK GI +IQIDE A REGLPL++++   Y DW ++SFR+T   V   TQIHTHMCYS+FN+II  I  +DADVI+IE SRS  ++LS F E  +Y
Sbjct:  506 CVRPPVIYGDVWRDKALTVEETLYAQSLTPRPVKGIMTGAVTILQWSYPRKDISRREIAYQIALALKEEVLELEKRGIKIIQIDEPAFREGLPLKRNKQDEYFDWTINSFRLTTADVSPFTQIHTHMCYSDFNEIIDRIYALDADVISIEASRSKGEILSAF-ENFRY 672          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_LACPL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactobacillus plantarum GN=metE PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.039e-49
Identity = 96/163 (58.90%), Postives = 127/163 (77.91%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P +I+GDV+  + +TV  S  AQS+T +P+KGMLT P+TI+NWSFVR+D PR +   QIALA++ EV++LEKAGI +IQ+DE ALREGLPL++     YLD AV+SF+IT  GVQ+ TQIHTHMCYSNF DII++I  +DADVI+IE SRS  +++S F +
Sbjct:  526 VRPPVIFGDVAYTEPITVAESVYAQSLTDQPVKGMLTAPLTIINWSFVRDDIPRAQVQNQIALALRQEVQNLEKAGIKIIQVDEPALREGLPLKQRHWQAYLDEAVYSFKITTTGVQNDTQIHTHMCYSNFADIINTIKALDADVISIETSRSHGEIISAFEQ 688          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_CORGL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum GN=metE PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.275e-49
Identity = 91/163 (55.83%), Postives = 119/163 (73.01%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P +++G+VSRP  MTV W   AQS+T + +KGMLTGPVTIL WSFVR+DQP   T  Q+ALA++DE+ DL +AG  +IQ+DE A+RE LPLR  +   YL W+V SFR+   G  D  QIHTHMCYS FN++I S+I +DADV TIE +RSD ++L+  +
Sbjct:  503 CVRPPVLFGNVSRPAPMTVKWFQYAQSLTQKHVKGMLTGPVTILAWSFVRDDQPLATTADQVALALRDEINDLIEAGAKIIQVDEPAIRELLPLRDVDKPAYLQWSVDSFRLATAGAPDDVQIHTHMCYSEFNEVISSVIALDADVTTIEAARSDMQVLAALK 665          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_CORGB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Corynebacterium glutamicum (strain R) GN=metE PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.275e-49
Identity = 91/163 (55.83%), Postives = 119/163 (73.01%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P +++G+VSRP  MTV W   AQS+T + +KGMLTGPVTIL WSFVR+DQP   T  Q+ALA++DE+ DL +AG  +IQ+DE A+RE LPLR  +   YL W+V SFR+   G  D  QIHTHMCYS FN++I S+I +DADV TIE +RSD ++L+  +
Sbjct:  503 CVRPPVLFGNVSRPAPMTVKWFQYAQSLTQKHVKGMLTGPVTILAWSFVRDDQPLATTADQVALALRDEINDLIEAGAKIIQVDEPAIRELLPLRDVDKPAYLQWSVDSFRLATAGAPDDVQIHTHMCYSEFNEVISSVIALDADVTTIEAARSDMQVLAALK 665          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_SYNJB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Synechococcus sp. GN=metE PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 8.998e-49
Identity = 98/169 (57.99%), Postives = 121/169 (71.60%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEK-LLSVFREGVKY 506
            CV P I+YGDV RP+ MTV    +AQS T +P+KGMLTGPVT+LNWSF R D PR E   QIALA++ EV DLE AG  ++Q+DE ALREGLPL+K     YL WAV +FR+   G +  TQIHTHMCYS F DII  I  +DADV++IENSRS+ K LL + + G ++
Sbjct:  506 CVRPPILYGDVVRPQPMTVREFQVAQSHTQKPVKGMLTGPVTMLNWSFPRVDIPRREQALQIALALRAEVADLEAAGAVMVQVDEPALREGLPLKKERWPEYLSWAVDAFRLATGGAKPETQIHTHMCYSEFGDIIEHIERLDADVLSIENSRSNNKTLLQIAQAGYRH 674          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_CAMJD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=metE PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.175e-48
Identity = 100/164 (60.98%), Postives = 122/164 (74.39%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P II+GDVSR K +T+  S  AQS++ + +KGMLTGPVTILNWSF R D    E+  QIALAI+DEV DLE AGI +IQIDEAALRE LPLRKS+ H+ YLDWA+ +F + + GV+  TQIHTHMCYS F+DI+  I  MDADVI+ E SRS+  LL   +
Sbjct:  515 CVKPPIIWGDVSRTKPITLACSKFAQSLSQKIVKGMLTGPVTILNWSFPREDISLKESTEQIALAIRDEVLDLENAGIKIIQIDEAALREKLPLRKSDWHSEYLDWAIPAFNLVHSGVKAKTQIHTHMCYSEFSDILKEIDAMDADVISFEASRSNLSLLDTLK 678          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_AQUAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Aquifex aeolicus GN=metE PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.004e-48
Identity = 97/161 (60.25%), Postives = 118/161 (73.29%), Query Frame = 3
Query:   12 PSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            P IIYGDVSRP  MT+   + AQS+T +P+KGMLTGPVTILNWS+ R D P+ E  YQIALA+ DEV+DLE AGI VIQIDE A REG PL+K +   Y DWAV +FR+ +   +  TQIHTHMCYS FN+II  I  MD DVI+IE SRS  +++ VF +
Sbjct:  522 PPIIYGDVSRPAPMTLEEITYAQSLTNKPVKGMLTGPVTILNWSYYREDVPKREIAYQIALALLDEVKDLENAGIKVIQIDEPAFREGAPLKKRDWPEYFDWAVKAFRLAS-RAKPETQIHTHMCYSEFNEIIEYIYQMDFDVISIEASRSKGEIIEVFEK 681          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STRP4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=metE PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 5.832e-48
Identity = 99/159 (62.26%), Postives = 121/159 (76.10%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            V P II+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    ++  QIALAIKDEV DLE AG+ +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I +MDADVI+ E SRS+ ++L
Sbjct:  511 VKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVASDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLEIL 669          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STRMU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus mutans GN=metE PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 5.832e-48
Identity = 98/165 (59.39%), Postives = 119/165 (72.12%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGV 500
            V P IIYGDV   + +TV  +  AQS+T RP+KGMLTGP+TI NWSF R D PR +   QI LAIKDE++ LE AGI +IQ+DEAALREGLPLRKS+   YLD AVH+F I    V+D TQIHTHMCYS F++II +I  +DADVI+IE SRS   ++  F   V
Sbjct:  506 VKPPIIYGDVQHLEPITVEETVYAQSLTDRPVKGMLTGPITITNWSFERTDIPRDQLFNQIGLAIKDEIKLLENAGIAIIQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKDETQIHTHMCYSKFDEIIDAIRALDADVISIETSRSHGDIIESFETAV 670          
The following BLAST results are available for this feature:
BLAST of CF835272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_COREF2.368e-4957.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEYD4.039e-4957.745-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACPL4.039e-4958.905-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGL5.275e-4955.835-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CORGB5.275e-4955.835-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SYNJB8.998e-4957.995-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAMJD1.175e-4860.985-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_AQUAE2.004e-4860.255-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRP45.832e-4862.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRMU5.832e-4859.395-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835272 ID=CF835272; Name=CF835272; organism=Citrus sinensis; type=EST; length=513bp
GCTGTGTGAACCCATCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCT
ATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAAT
GAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCA
GAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATC
AAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAAT
TGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATG
CTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGT
GTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAA
CGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCATTG
AGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTC
AAGTATGGTGCTG
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