CF835272

Overview
NameCF835272
Unique NameCF835272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STRTD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=metE PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.299e-47
Identity = 99/159 (62.26%), Postives = 121/159 (76.10%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            V P II+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    ++  QIALAIKDEV DLE AGI +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I ++DADVI+ E SRS+ ++L
Sbjct:  511 VKPPIIWGDVTRLNPITVKWSSYAQSRTDKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGIKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNLDADVISFEASRSNLEIL 669          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STRPN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae GN=metE PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.697e-47
Identity = 98/159 (61.64%), Postives = 121/159 (76.10%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            V P II+GDV+R   +TV WSS AQS T +P+KGMLTGPVTILNWSF R D    ++  QIALAIKDEV DLE AG+ +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I +MDADVI+ E +RS+ ++L
Sbjct:  511 VKPPIIWGDVTRLNPITVKWSSYAQSRTNKPVKGMLTGPVTILNWSFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEANRSNLEIL 669          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BACSU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus subtilis GN=metE PE=1 SV=4)

HSP 1 Score: 188.348 bits (477), Expect = 1.697e-47
Identity = 93/154 (60.39%), Postives = 116/154 (75.32%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS 464
            CV P +IYGDV   + MTV  +  AQS+T++ +KGMLTGPVTILNWSF RND  R E  +QI LA++ EV+ LE AGI +IQ+DE ALREGLPL+  +   YL WA  +FR+T   V++ TQIHTHMCYSNF DI+ +I D+DADVITIE+SRS
Sbjct:  520 CVRPPVIYGDVEFIEPMTVKDTVYAQSLTSKHVKGMLTGPVTILNWSFPRNDISRKEIAFQIGLALRKEVKALEDAGIQIIQVDEPALREGLPLKTRDWDEYLTWAAEAFRLTTSSVKNETQIHTHMCYSNFEDIVDTINDLDADVITIEHSRS 673          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BACWK (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metE PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.216e-47
Identity = 91/163 (55.83%), Postives = 119/163 (73.01%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P +IYGDV+    MT+  +  AQS+T + +KGMLTGPVTILNWSFVRND  R E  YQIALA++ E+E LE +GI VIQ+DE ALREG+PL++ +   Y+ WAV SF +    V++ TQIHTHMCYSNF DI+ +I  +DADVI+IE SRS  + ++  +
Sbjct:  520 CVKPPVIYGDVAFISGMTIKETVYAQSLTEKVVKGMLTGPVTILNWSFVRNDISRKEVSYQIALALRHEIELLESSGIRVIQVDEPALREGMPLKEKDWDAYITWAVQSFLLATSSVENETQIHTHMCYSNFEDIVDAIRALDADVISIETSRSHGEFINTLK 682          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BACHD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus halodurans GN=metE PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.216e-47
Identity = 95/164 (57.93%), Postives = 122/164 (74.39%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P IIYG+VS  + MTV  +  AQS+T +P+KGMLTGPVTILNWSFVR+D P     +QIA A+  EV  LE+AGI +IQIDE A+REGLPL+  +   YLDWAV +FR +   V+ TTQIHTHMCYS F+++I +I D+DADVI+IE SRS  +++S F +
Sbjct:  514 CVKPPIIYGNVSFTEPMTVAETVYAQSLTDKPVKGMLTGPVTILNWSFVRDDLPLTVIAHQIAEALTHEVTALEEAGIEMIQIDEPAIREGLPLKAEDQQEYLDWAVSAFRASCAHVKATTQIHTHMCYSEFHEMIEAIDDLDADVISIETSRSHGEMISAFEK 677          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BACA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=metE PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.216e-47
Identity = 95/164 (57.93%), Postives = 117/164 (71.34%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P +I+GDV   + MTV  +  AQS+T + MKGMLTGPVTILNWSF R D  R E  +QI LA++ EV+ LE AGI +IQ+DE ALREGLPL+  +   YL WA  +FR+T   VQ+ TQIHTHMCYSNF DI+ +I D+DADVITIE+SRS    L   +E
Sbjct:  520 CVRPPVIFGDVEFIEPMTVKDTVYAQSLTEKHMKGMLTGPVTILNWSFPRVDISRKEIAFQIGLALRKEVKALEDAGIQIIQVDEPALREGLPLKTQDWDEYLTWAAEAFRLTTSSVQNETQIHTHMCYSNFEDIVDTINDLDADVITIEHSRSHGGFLEYLKE 683          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_LISMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=metE PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.894e-47
Identity = 94/163 (57.67%), Postives = 122/163 (74.85%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P +IYGDV+  + +TV  S  AQS+T RP+KGMLT PVTI+NWSFVR+D P      Q+ LA++ EVE LE+ GI VIQ+DE ALREGLPL+++    YLD AV+SF++T   VQ+ TQIHTHMCYS+F+DII +I  +DADVI+IE SRS  +++S F E
Sbjct:  523 VRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWQKYLDDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEE 685          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_LISMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=metE PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.894e-47
Identity = 94/163 (57.67%), Postives = 122/163 (74.85%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P +IYGDV+  + +TV  S  AQS+T RP+KGMLT PVTI+NWSFVR+D P      Q+ LA++ EVE LE+ GI VIQ+DE ALREGLPL+++    YLD AV+SF++T   VQ+ TQIHTHMCYS+F+DII +I  +DADVI+IE SRS  +++S F E
Sbjct:  523 VRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWQKYLDDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEE 685          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_LISIN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria innocua GN=metE PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.894e-47
Identity = 94/163 (57.67%), Postives = 122/163 (74.85%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P +IYGDV+  + +TV  S  AQS+T RP+KGMLT PVTI+NWSFVR+D P      Q+ LA++ EVE LE+ GI VIQ+DE ALREGLPL+++    YLD AV+SF++T   VQ+ TQIHTHMCYS+F+DII +I  +DADVI+IE SRS  +++S F E
Sbjct:  523 VRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWQKYLDDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEE 685          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STAES (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metE PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 4.937e-47
Identity = 98/163 (60.12%), Postives = 115/163 (70.55%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P +IYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE+AGI VIQ+DE ALREGLPLR   H  YL+ AVHSF++    V D TQIHTHMCYS F  IIH+I D+DADVI+IE SRS   L+  F +
Sbjct:  506 VKPPVIYGDVKWTAPLTVKETVYAQSLTDKPVKGMLTGPVTILNWSFERVDVPRKVVQDQIALAIDEEVLALEEAGIKVIQVDEPALREGLPLRSEYHEQYLEDAVHSFKLATSSVHDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIQDFED 668          
The following BLAST results are available for this feature:
BLAST of CF835272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_STRTD1.299e-4762.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPN1.697e-4761.645-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACSU1.697e-4760.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACWK2.216e-4755.835-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACHD2.216e-4757.935-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACA22.216e-4757.935-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMF2.894e-4757.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMC2.894e-4757.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISIN2.894e-4757.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAES4.937e-4760.125-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835272 ID=CF835272; Name=CF835272; organism=Citrus sinensis; type=EST; length=513bp
GCTGTGTGAACCCATCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCT
ATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAAT
GAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCA
GAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATC
AAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAAT
TGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATG
CTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGT
GTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAA
CGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCATTG
AGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTC
AAGTATGGTGCTG
back to top