CF835272

Overview
NameCF835272
Unique NameCF835272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STAEQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metE PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 4.937e-47
Identity = 98/163 (60.12%), Postives = 115/163 (70.55%), Query Frame = 3 
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P +IYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE+AGI VIQ+DE ALREGLPLR   H  YL+ AVHSF++    V D TQIHTHMCYS F  IIH+I D+DADVI+IE SRS   L+  F +
Sbjct:  506 VKPPVIYGDVKWTAPLTVKETVYAQSLTDKPVKGMLTGPVTILNWSFERVDVPRKVVQDQIALAIDEEVLALEEAGIKVIQVDEPALREGLPLRSEYHEQYLEDAVHSFKLATSSVHDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIQDFED 668
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_LISW6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metE PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.100e-46
Identity = 93/163 (57.06%), Postives = 122/163 (74.85%), Query Frame = 3 
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P +IYGDV+  + +TV  S  AQS+T RP+KGMLT PVTI+NWSFVR+D P      Q+ LA++ EVE LE+ GI VIQ+DE ALREGLPL+++    YL+ AV+SF++T   VQ+ TQIHTHMCYS+F+DII +I  +DADVI+IE SRS  +++S F E
Sbjct:  523 VRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWEKYLNDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEE 685
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_LISMO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Listeria monocytogenes GN=metE PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.100e-46
Identity = 93/163 (57.06%), Postives = 122/163 (74.85%), Query Frame = 3 
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P +IYGDV+  + +TV  S  AQS+T RP+KGMLT PVTI+NWSFVR+D P      Q+ LA++ EVE LE+ GI VIQ+DE ALREGLPL+++    YL+ AV+SF++T   VQ+ TQIHTHMCYS+F+DII +I  +DADVI+IE SRS  +++S F E
Sbjct:  523 VRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIINWSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWEKYLNDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIISTFEE 685
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_THEEB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=metE PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.436e-46
Identity = 93/159 (58.49%), Postives = 114/159 (71.70%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            CV P IIYGD++RP+ MTV    +AQS+T + +K MLTGPVT++NWSF R D PR E   QIALA++DEV DLE AG  +IQIDE ALREGLPL+      YL WAV +FR+     +  TQIHTHMCYS F DII  I  +DADV++IENSRS+ + L
Sbjct:  513 CVRPPIIYGDIARPQPMTVREFKVAQSLTDKIVKAMLTGPVTMINWSFTRTDIPRSEQAMQIALALRDEVADLEAAGAKMIQIDEPALREGLPLKAERWNEYLSWAVDAFRLAAGVAKPETQIHTHMCYSEFGDIIEHIERLDADVLSIENSRSNNETL 671
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_TRIEI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=metE PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.876e-46
Identity = 88/158 (55.70%), Postives = 119/158 (75.32%), Query Frame = 3 
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLL 479
            V P II+GD+ RP AMT+    +AQS+T +P+KGMLTGPVT+LNWS+ R D  R E  +Q+ALAI++E++DLEKAG   IQ+DE A+REGLPL++     YL+WAV +FR++    +  TQ+HTHMCYS F DI+ SI  +DADVI+IE+SRS+ + L
Sbjct:  508 VRPPIIFGDIYRPHAMTIREFEVAQSLTEKPVKGMLTGPVTMLNWSYPRTDISRQEQAFQLALAIREELKDLEKAGAAFIQVDEPAMREGLPLKQQRWHEYLNWAVDAFRLSTAIARPETQVHTHMCYSEFGDIMESIKQLDADVISIEDSRSNNETL 665
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STAHJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=metE PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 4.180e-46
Identity = 97/163 (59.51%), Postives = 116/163 (71.17%), Query Frame = 3 
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P +IYGDV   + +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE+AGI VIQ+DE ALREGLPLR   H  YL  AV+SF++    VQD TQIHTHMCYS F  IIH+I ++DADVI+IE SRS   L+  F +
Sbjct:  506 VKPPVIYGDVKWTEPLTVKETVYAQSLTDKPVKGMLTGPVTILNWSFERVDVPRKVVQDQIALAIDEEVLALEEAGIKVIQVDEPALREGLPLRSEYHEQYLADAVNSFKLATSSVQDETQIHTHMCYSQFGQIIHAIHELDADVISIETSRSHGDLIKDFED 668
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STAAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MW2) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.588e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 3 
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P IIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F  IIH+I D+DADVI+IE SRS   L+  F +
Sbjct:  506 VKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIKDFED 668
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STAAT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.588e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 3 
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P IIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F  IIH+I D+DADVI+IE SRS   L+  F +
Sbjct:  506 VKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIKDFED 668
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STAAS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.588e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 3 
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P IIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F  IIH+I D+DADVI+IE SRS   L+  F +
Sbjct:  506 VKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIKDFED 668
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STAAR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=metE PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.588e-45
Identity = 98/163 (60.12%), Postives = 113/163 (69.33%), Query Frame = 3 
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            V P IIYGDV     +TV  +  AQS+T +P+KGMLTGPVTILNWSF R D PR     QIALAI +EV  LE AGI VIQ+DE ALREGLPLR   H  YL  AV SF++    V+D TQIHTHMCYS F  IIH+I D+DADVI+IE SRS   L+  F +
Sbjct:  506 VKPPIIYGDVKWTAPLTVDETVYAQSLTDKPVKGMLTGPVTILNWSFERVDLPRKVVQDQIALAINEEVLALEAAGIKVIQVDEPALREGLPLRSEYHEQYLKDAVLSFKLATSSVRDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIKDFED 668
The following BLAST results are available for this feature:
BLAST of CF835272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_STAEQ4.937e-4760.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISW61.100e-4657.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LISMO1.100e-4657.065-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEEB1.436e-4658.495-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_TRIEI1.876e-4655.705-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAHJ4.180e-4659.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAW1.588e-4560.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAT1.588e-4560.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAS1.588e-4560.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAAR1.588e-4560.125-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835272 ID=CF835272; Name=CF835272; organism=Citrus sinensis; type=EST; length=513bp
GCTGTGTGAACCCATCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCT
ATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAAT
GAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCA
GAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATC
AAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAAT
TGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATG
CTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGT
GTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAA
CGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCATTG
AGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTC
AAGTATGGTGCTG
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