CF835272

Overview
NameCF835272
Unique NameCF835272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:102..614. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STRA5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus agalactiae serotype V GN=metE PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 4.621e-45
Identity = 92/165 (55.76%), Postives = 120/165 (72.73%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGV 500
            V P IIYGDV   + +++  +  AQS+T +P+KGMLTGP+TI NWSF R+D  R +   QIALAIKDE++ LE++GI +IQ+DEAALREGLPLR+ +   YLD AV +F+I    V+D TQIHTHMCYS F++II SI  +DADVI+IE SRS   ++  F   V
Sbjct:  506 VKPPIIYGDVKHIQPLSLEETVYAQSLTKKPVKGMLTGPITITNWSFERDDISRSDLFNQIALAIKDEIQLLEQSGIAIIQVDEAALREGLPLRQQKQQAYLDDAVAAFKIATSSVKDETQIHTHMCYSKFDEIIDSIRALDADVISIETSRSHGDIIESFETAV 670          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STRA3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus agalactiae serotype III GN=metE PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 4.621e-45
Identity = 92/165 (55.76%), Postives = 120/165 (72.73%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGV 500
            V P IIYGDV   + +++  +  AQS+T +P+KGMLTGP+TI NWSF R+D  R +   QIALAIKDE++ LE++GI +IQ+DEAALREGLPLR+ +   YLD AV +F+I    V+D TQIHTHMCYS F++II SI  +DADVI+IE SRS   ++  F   V
Sbjct:  506 VKPPIIYGDVKHIQPLSLEETVYAQSLTKKPVKGMLTGPITITNWSFERDDISRSDLFNQIALAIKDEIQLLEQSGIAIIQVDEAALREGLPLRQQKQQAYLDDAVAAFKIATSSVKDETQIHTHMCYSKFDEIIDSIRALDADVISIETSRSHGDIIESFETAV 670          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_STRA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus agalactiae serotype Ia GN=metE PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 4.621e-45
Identity = 92/165 (55.76%), Postives = 120/165 (72.73%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGV 500
            V P IIYGDV   + +++  +  AQS+T +P+KGMLTGP+TI NWSF R+D  R +   QIALAIKDE++ LE++GI +IQ+DEAALREGLPLR+ +   YLD AV +F+I    V+D TQIHTHMCYS F++II SI  +DADVI+IE SRS   ++  F   V
Sbjct:  506 VKPPIIYGDVKHIQPLSLEETVYAQSLTKKPVKGMLTGPITITNWSFERDDISRSDLFNQIALAIKDEIQLLEQSGIAIIQVDEAALREGLPLRQQKQQAYLDDAVAAFKIATSSVKDETQIHTHMCYSKFDEIIDSIRALDADVISIETSRSHGDIIESFETAV 670          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_THESQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga sp. (strain RQ2) GN=metE PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.912e-44
Identity = 85/162 (52.47%), Postives = 117/162 (72.22%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            C  P IIYG V+RP+ MT+   + AQS+T +P+KGMLTGPVTI++WS+ R D P  E  YQIALAI +EV+DLE+AGI ++QIDE A RE  P++KS+   Y +WA+++F +     +  TQIH HMCYS+FN+II  I  ++ DVI+IE SRS  +++S F
Sbjct:  494 CYRPPIIYGTVTRPEPMTLKEITYAQSLTEKPVKGMLTGPVTIMSWSYYREDIPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEIISAF 654          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_THEMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga maritima GN=metE PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.912e-44
Identity = 85/162 (52.47%), Postives = 117/162 (72.22%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            C  P IIYG V+RP+ MT+   + AQS+T +P+KGMLTGPVTI++WS+ R D P  E  YQIALAI +EV+DLE+AGI ++QIDE A RE  P++KS+   Y +WA+++F +     +  TQIH HMCYS+FN+II  I  ++ DVI+IE SRS  +++S F
Sbjct:  494 CYRPPIIYGTVTRPEPMTLKEITYAQSLTEKPVKGMLTGPVTIMSWSYYREDIPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEIISAF 654          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_THEP1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metE PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.378e-43
Identity = 84/162 (51.85%), Postives = 114/162 (70.37%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            C  P IIYG VSR   MT+   + AQS+T +P+KGMLTGP+TI+ WS+ R D P  E  YQIALAI +EV+DLE+AGI ++QIDE A RE  P++KS+   Y +WA+++F +     +  TQIH HMCYS+FN+II  I  ++ DVI+IE SRS  +++S F
Sbjct:  494 CYRPPIIYGTVSRTGPMTLKEITYAQSLTEKPVKGMLTGPITIMGWSYYREDIPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPVKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEIISAF 654          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_CANAL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Candida albicans GN=MET6 PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 7.378e-43
Identity = 90/156 (57.69%), Postives = 114/156 (73.08%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRK-SEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDE 470
            V P II GDVSRPKAMTV  S  AQS+T++PMKGMLTGPVTIL WSF R+D        Q+ LA++DEV DLE AGI VIQ+DE A+REGLPLR   E + YL+WA  SFR+   GV+++TQIH+H CYS+ +   + I  +DADV++IE S+ D+
Sbjct:  532 VRPPIIVGDVSRPKAMTVKESVYAQSITSKPMKGMLTGPVTILRWSFPRDDVSGKIQALQLGLALRDEVNDLEGAGITVIQVDEPAIREGLPLRAGKERSDYLNWAAQSFRVATSGVENSTQIHSHFCYSDLDP--NHIKALDADVVSIEFSKKDD 685          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 166.777 bits (421), Expect = 5.287e-41
Identity = 85/156 (54.49%), Postives = 113/156 (72.44%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRK-SEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDE 470
            V P II GD+SRPKAM+V  S  AQS+T++P+KGMLTGP+T L WSF R+D  +     Q+ALA++DEV DLE AGI VIQ+DE ALREGLPLR+ +E + Y  WA  +FR+   GV + TQIH+H CYS+ +   + I  +DADV++IE S+ D+
Sbjct:  530 VRPPIIVGDLSRPKAMSVKESVYAQSITSKPVKGMLTGPITCLRWSFPRDDVDQKTQAMQLALALRDEVNDLEAAGIKVIQVDEPALREGLPLREGTERSAYYTWAAEAFRVATSGVANKTQIHSHFCYSDLDP--NHIKALDADVVSIEFSKKDD 683          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_CHLRE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.049e-37
Identity = 77/160 (48.12%), Postives = 104/160 (65.00%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLS 482
            CV P ++  D++     T +   +A    A+P+KG+LTGPVTILNWSF R D  R     Q+ LA++ EV  LE AG  +IQ+D+ ALREGLPL     A YL WAV +FR+        TQ+ TH+CYS+F DI+ +I  MDADV+TIENSRSD+ +++
Sbjct:  530 CVRPPLVVDDITYRGPSTCWEYKVAIPTAAQPVKGLLTGPVTILNWSFPRKDISRAAQAMQLGLALRQEVAALEAAGCTIIQVDDPALREGLPLNGERWASYLSWAVDAFRLCTGVAAAGTQVVTHLCYSDFQDILPAIDRMDADVLTIENSRSDKPMMA 689          
The following BLAST results are available for this feature:
BLAST of CF835272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_STRA54.621e-4555.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRA34.621e-4555.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRA14.621e-4555.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THESQ3.912e-4452.475-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEMA3.912e-4452.475-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEP17.378e-4351.855-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CANAL7.378e-4357.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YEAST5.287e-4154.495-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHLRE6.049e-3748.135-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835272 ID=CF835272; Name=CF835272; organism=Citrus sinensis; type=EST; length=513bp
GCTGTGTGAACCCATCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCT
ATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAAT
GAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCA
GAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATC
AAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAAT
TGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATG
CTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGT
GTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAA
CGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCATTG
AGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTC
AAGTATGGTGCTG
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