CF835272

Overview
NameCF835272
Unique NameCF835272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:102..614. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BURTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metE PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 3.771e-55
Identity = 103/162 (63.58%), Postives = 125/162 (77.16%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P ++YGDV  P+ MTV W+S AQS+T +P+KGMLTGPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQ+DE ALREGLPL+  + A YLDWAV +FRI   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F
Sbjct:  520 CVKPPLVYGDVYLPEPMTVGWASYAQSLTTKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQVDEPALREGLPLKARDRAEYLDWAVRAFRIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF 681
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_ERWT9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metE PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 4.926e-55
Identity = 106/164 (64.63%), Postives = 124/164 (75.61%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P +I GDVSRP+A+TV W+  AQS+T +P+KGMLTGPVTIL WSF R D  R     QIALA++DEVEDLEKAGI +IQIDE ALREGLPL +S+   YL+WAV +FR+     QD TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F E
Sbjct:  517 CVKPPVIIGDVSRPEAITVNWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVEDLEKAGIGIIQIDEPALREGLPLHQSDWGAYLEWAVDAFRLNAAVAQDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEE 680
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 4.926e-55
Identity = 100/167 (59.88%), Postives = 129/167 (77.25%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVK 503
            C+ P II GD+SRP  +T+ W + AQS+T +P+KG+LTGP+TI+ WSF R D PRH    Q+ALAI+DEV DLEK+GI VIQIDE ALREGLPL+KSE ++YL WA+++F+IT   V+D TQIHTHMCYS FN+II  I+ +D DVI+IE+SRSD +LL   +   K
Sbjct:  526 CIKPPIIIGDISRPIPITIPWINYAQSLTNKPVKGILTGPITIMTWSFAREDIPRHMIALQLALAIRDEVMDLEKSGIGVIQIDEPALREGLPLKKSEQSYYLKWAINTFKITVSSVKDNTQIHTHMCYSEFNEIIDDILKLDVDVISIESSRSDLQLLQFIKTAGK 692
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BURPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei GN=metE PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 6.433e-55
Identity = 104/162 (64.20%), Postives = 125/162 (77.16%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P ++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F
Sbjct:  520 CVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF 681
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BURP6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 668) GN=metE PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 6.433e-55
Identity = 104/162 (64.20%), Postives = 125/162 (77.16%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P ++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F
Sbjct:  520 CVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF 681
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BURP1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 1710b) GN=metE PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 6.433e-55
Identity = 104/162 (64.20%), Postives = 125/162 (77.16%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P ++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F
Sbjct:  520 CVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF 681
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BURP0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 1106a) GN=metE PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 6.433e-55
Identity = 104/162 (64.20%), Postives = 125/162 (77.16%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P ++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F
Sbjct:  520 CVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF 681
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BURMS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain SAVP1) GN=metE PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 6.433e-55
Identity = 104/162 (64.20%), Postives = 125/162 (77.16%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P ++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F
Sbjct:  520 CVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF 681
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BURMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei GN=metE PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 6.433e-55
Identity = 104/162 (64.20%), Postives = 125/162 (77.16%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P ++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F
Sbjct:  520 CVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF 681
[Close]
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BURM9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain NCTC 10229) GN=metE PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 6.433e-55
Identity = 104/162 (64.20%), Postives = 125/162 (77.16%), Query Frame = 3 
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P ++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F
Sbjct:  520 CVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF 681
The following BLAST results are available for this feature:
BLAST of CF835272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_BURTA3.771e-5563.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ERWT94.926e-5564.635-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOFL4.926e-5559.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPS6.433e-5564.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP66.433e-5564.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP16.433e-5564.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP06.433e-5564.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURMS6.433e-5564.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURMA6.433e-5564.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURM96.433e-5564.205-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835272 ID=CF835272; Name=CF835272; organism=Citrus sinensis; type=EST; length=513bp
GCTGTGTGAACCCATCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCT
ATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAAT
GAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCA
GAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATC
AAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAAT
TGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATG
CTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGT
GTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAA
CGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCATTG
AGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTC
AAGTATGGTGCTG
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