CF835272

Overview
NameCF835272
Unique NameCF835272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:102..614. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BURM7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=metE PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 6.433e-55
Identity = 104/162 (64.20%), Postives = 125/162 (77.16%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P ++YGDV  P+ MTV W+S AQS++A+P+KGMLTGPVT+L WSFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F
Sbjct:  520 CVKPPLVYGDVYLPEPMTVGWASYAQSLSAKPVKGMLTGPVTMLQWSFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF 681          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_RHILO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhizobium loti GN=metE PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.097e-54
Identity = 105/162 (64.81%), Postives = 122/162 (75.31%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            V P II GDVSR   MT+ W   AQS+T +P+KGMLTGPVTILNWSFVR+D PR   C Q+ALAI+DEV DLEKAG  +IQIDEAALREGLPLR+++   YLDWAV  FR+ +  V D TQIHTHMCYS F DI+ +I  MDADVI+IE SRS  +LL   R
Sbjct:  536 VRPPIIIGDVSRQNPMTLHWWRYAQSLTPKPVKGMLTGPVTILNWSFVRDDLPRSAVCRQVALAIRDEVSDLEKAGAKMIQIDEAALREGLPLREADWQAYLDWAVECFRLASTAVGDATQIHTHMCYSEFGDIVDAIAAMDADVISIETSRSQLELLDTLR 697          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_PSEMY (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas mendocina (strain ymp) GN=metE PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.872e-54
Identity = 104/162 (64.20%), Postives = 121/162 (74.69%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P++I GD+ RP+AMTV W   AQ +T +PMKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE AGI +IQIDEAA REGLPLR++    YLDWA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F
Sbjct:  528 CVKPAVIVGDLGRPQAMTVEWIKYAQGLTDKPMKGMLTGPVTMLMWSFPREDVSREVQARQLALAIRDEVVDLEAAGIRIIQIDEAAFREGLPLRQAAWQGYLDWATEAFRLAASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF 689          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_PSEF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metE PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.193e-54
Identity = 103/163 (63.19%), Postives = 122/163 (74.85%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P++I+GD+SRP AMTV W   AQ +T + MKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE AGI ++QIDEAA REGLPLR+++   YLDWA   FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F+
Sbjct:  523 CVKPALIFGDLSRPNAMTVEWIRYAQGLTDKVMKGMLTGPVTMLMWSFPREDVSREVQARQLALAIRDEVLDLEAAGIRIVQIDEAAFREGLPLRRAQWQHYLDWATEVFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLDAFK 685          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_PSEE4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas entomophila (strain L48) GN=metE PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.193e-54
Identity = 103/162 (63.58%), Postives = 121/162 (74.69%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            CV P++I+GD+SRPKAMTV W   AQ +T + MKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE AGI ++QIDEAA REGLPLR+S    YL+WA  +FR+    V+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F
Sbjct:  524 CVKPAVIFGDLSRPKAMTVEWIKYAQGLTRKAMKGMLTGPVTMLMWSFPREDVTREVQARQLALAIRDEVVDLEAAGIKIVQIDEAAFREGLPLRRSAWPHYLEWATEAFRLCASDVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF 685          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_ACIF5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metE PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.193e-54
Identity = 105/161 (65.22%), Postives = 120/161 (74.53%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            V P +I+GDVSRP  MTV WS  AQS+T RPMKGMLTGPVTIL WSFVR+DQPR  T  QIALAI+DEV DL  AGI +IQIDE A REGLPL++ +   YL+WA  +FRI+     D  QIHTHMCYS FNDI+ +I  MDADVITIE SRS  +LL  F
Sbjct:  546 VKPPLIFGDVSRPTPMTVAWSKYAQSLTQRPMKGMLTGPVTILQWSFVRDDQPRERTALQIALAIRDEVRDLIDAGIGIIQIDEPAYREGLPLKRKDWGHYLEWASRAFRISAQIAPDDVQIHTHMCYSEFNDILPAIAAMDADVITIETSRSQMELLDAF 706          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_ACIF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=metE PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 3.193e-54
Identity = 105/161 (65.22%), Postives = 120/161 (74.53%), Query Frame = 3
Query:    6 VNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVF 488
            V P +I+GDVSRP  MTV WS  AQS+T RPMKGMLTGPVTIL WSFVR+DQPR  T  QIALAI+DEV DL  AGI +IQIDE A REGLPL++ +   YL+WA  +FRI+     D  QIHTHMCYS FNDI+ +I  MDADVITIE SRS  +LL  F
Sbjct:  546 VKPPLIFGDVSRPTPMTVAWSKYAQSLTQRPMKGMLTGPVTILQWSFVRDDQPRERTALQIALAIRDEVRDLIDAGIGIIQIDEPAYREGLPLKRKDWGHYLEWASRAFRISAQIAPDDVQIHTHMCYSEFNDILPAIAAMDADVITIETSRSQMELLDAF 706          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_PSEPW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas putida (strain W619) GN=metE PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 4.170e-54
Identity = 103/164 (62.80%), Postives = 122/164 (74.39%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P++IYGD+SRP+AMTV W   AQ +T + MKGMLTGPVT+L WSF R D  R     Q+ALAI+DEV DLE A I ++QIDEAA REGLPLR+S    YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F +
Sbjct:  528 CVKPAVIYGDLSRPEAMTVAWIRYAQGLTRKVMKGMLTGPVTMLMWSFPREDVSRETQARQLALAIRDEVLDLEAADIKIVQIDEAAFREGLPLRRSAWPAYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAFEK 691          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_SODGM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Sodalis glossinidius (strain morsitans) GN=metE PE=3 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 5.446e-54
Identity = 105/164 (64.02%), Postives = 123/164 (75.00%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFRE 494
            CV P II GD+SRP+A+T+ W+  AQS+TA+P+KGMLTGPVTIL WSF R D  R     QIALA++DEV DLE+AGI VIQIDE ALREGLPL+ S    YL WAV +FR+     QD TQIHTHMCY  FNDI+ SI  +DADVITIE SRSD +LL  F+E
Sbjct:  519 CVKPPIIIGDISRPEAITIEWARYAQSLTAKPVKGMLTGPVTILCWSFPREDVSRKTIARQIALALRDEVADLEQAGIGVIQIDEPALREGLPLKHSAWQDYLTWAVEAFRLNAAVAQDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLETFKE 682          
BLAST of CF835272 vs. ExPASy Swiss-Prot
Match: METE_BUCCC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Buchnera aphidicola subsp. Cinara cedri GN=metE PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 7.113e-54
Identity = 102/163 (62.58%), Postives = 125/163 (76.69%), Query Frame = 3
Query:    3 CVNPSIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFR 491
            CV P II GD+SR   MTV WS  AQS+T +P+K MLTGPVTIL WSF R D  + + C QIA++++DEV DLE +GIN+IQIDE ALREGLPLR  E   YL WAV SF+I + GV+++TQIHTHMCY  FNDI+ +I+D+DADVITIE SRSD +LL  F+
Sbjct:  519 CVKPPIIVGDISRITPMTVMWSKYAQSLTKKPVKAMLTGPVTILCWSFPREDISKEDICNQIAISLRDEVLDLENSGINIIQIDEPALREGLPLRTHEWNNYLRWAVKSFKICSSGVKNSTQIHTHMCYCEFNDIMPAIVDLDADVITIETSRSDMELLEFFK 681          
The following BLAST results are available for this feature:
BLAST of CF835272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_BURM76.433e-5564.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RHILO1.097e-5464.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEMY1.872e-5464.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEF53.193e-5463.195-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEE43.193e-5463.585-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACIF53.193e-5465.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACIF23.193e-5465.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEPW4.170e-5462.805-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SODGM5.446e-5464.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BUCCC7.113e-5462.585-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835272 ID=CF835272; Name=CF835272; organism=Citrus sinensis; type=EST; length=513bp
GCTGTGTGAACCCATCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCT
ATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAAT
GAAGGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCA
GAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATC
AAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAAT
TGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATG
CTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGT
GTCCAGGACACTACCCAGATCCACACCCACATGTGCTACTCCAACTTCAA
CGACATTATCCACTCAATTATCGACATGGATGCTGATGTGATCACCATTG
AGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTC
AAGTATGGTGCTG
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