CF835279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_ECOBW (Carnitine operon protein caiE OS=Escherichia coli (strain K12 / BW2952) GN=caiE PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ R ++ G PA+ +R Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_ECO7I (Carnitine operon protein caiE OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=caiE PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19 Identity = 54/138 (39.13%), Postives = 75/138 (54.35%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ R ++ G PA+ +R Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAISFVKAGFRGEKRQLLMGTPARAVR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALTY (Carnitine operon protein caiE OS=Salmonella typhimurium GN=caiE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALTI (Carnitine operon protein caiE OS=Salmonella typhi GN=caiE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALSV (Carnitine operon protein caiE OS=Salmonella schwarzengrund (strain CVM19633) GN=caiE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALPK (Carnitine operon protein caiE OS=Salmonella paratyphi A (strain AKU_12601) GN=caiE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALPC (Carnitine operon protein caiE OS=Salmonella paratyphi C (strain RKS4594) GN=caiE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALPA (Carnitine operon protein caiE OS=Salmonella paratyphi A GN=caiE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALNS (Carnitine operon protein caiE OS=Salmonella newport (strain SL254) GN=caiE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALHS (Carnitine operon protein caiE OS=Salmonella heidelberg (strain SL476) GN=caiE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142 The following BLAST results are available for this feature:
BLAST of CF835279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835279 ID=CF835279; Name=CF835279; organism=Citrus sinensis; type=EST; length=677bpback to top |