CF835279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALG2 (Carnitine operon protein caiE OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=caiE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALEP (Carnitine operon protein caiE OS=Salmonella enteritidis PT4 (strain P125109) GN=caiE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALDC (Carnitine operon protein caiE OS=Salmonella dublin (strain CT_02021853) GN=caiE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG V+ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_ECO5E (Carnitine operon protein caiE OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=caiE PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.027e-18 Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ ++ G PA+ +R Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYTDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_ECO57 (Carnitine operon protein caiE OS=Escherichia coli O157:H7 GN=caiE PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.027e-18 Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ ++ G PA+ +R Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYTDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SHISS (Carnitine operon protein caiE OS=Shigella sonnei (strain Ss046) GN=caiE PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18 Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ ++ G PA+ +R Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_SALA4 (Carnitine operon protein caiE OS=Salmonella agona (strain SL483) GN=caiE PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18 Identity = 52/138 (37.68%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V DAFV PSA +IGDV VG G I LRGD + + +G+N+QD ++H T + +N +GH A+LHGC V +A VGM + ++DG ++ +VAA S V+ + + ++ G+PA+ LR Sbjct: 11 PVVHPDAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGSNLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVVGRDALVGMNSVIMDGAMIGEESIVAAMSFVKAGFQGEARQLLVGSPARVLR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_ECOHS (Carnitine operon protein caiE OS=Escherichia coli O9:H4 (strain HS) GN=caiE PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18 Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ ++ G PA+ +R Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_ECO8A (Carnitine operon protein caiE OS=Escherichia coli O8 (strain IAI1) GN=caiE PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18 Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ ++ G PA+ +R Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVR 142
BLAST of CF835279 vs. ExPASy Swiss-Prot
Match: CAIE_ECO55 (Carnitine operon protein caiE OS=Escherichia coli (strain 55989 / EAEC) GN=caiE PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.752e-18 Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = 2 Query: 263 PAVDKDAFVAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTTIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVVVERHGMVAAGSLVRQNTRIPSGEVWGGNPAKFLR 676 P V AFV PSA +IGDV VG G I LRGD + V +G NIQD ++H T +G+N +GH A+LHGC + +A VGM + ++DG V+ +VAA S V+ ++ G PA+ +R Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVR 142 The following BLAST results are available for this feature:
BLAST of CF835279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835279 ID=CF835279; Name=CF835279; organism=Citrus sinensis; type=EST; length=677bpback to top |