CF835281

Overview
NameCF835281
Unique NameCF835281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig940 contig Csv1_Contig940:22..650. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 8.963e-43
Identity = 94/183 (51.37%), Postives = 120/183 (65.57%), Query Frame = 1
Query:   82 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALLRSSHVWKGSVQIF 630
            +  QLS +FY ++CP  L  I+  +  A SSD R+GASL+RLHFHDCF  GCDAS+LL        E+ A PN  S RGF VIDN+K  +E  C++ VSCADILT+AA  SV   GGPSW VPLGRRDS TA+ +LAN +LPGPS+S  +L+++F    LN   D+VAL  +  + K     F
Sbjct:   21 ASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLLTGM-----EQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLN-TVDMVALSGAHTIGKAQCSNF 195          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.588e-42
Identity = 93/176 (52.84%), Postives = 115/176 (65.34%), Query Frame = 1
Query:  103 SFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALLRSSHVWKGSVQIF 630
            +FY  +CP+V NI+  V+++A  SD R GA LIRLHFHDCFV+GCD S+LL+    + SE  AAP N +  GF +++N+KAAVEKAC  VVSCADIL IA+  SV L+GGP W V LGRRDSR AN   A   LP P  ++ +LK  F  V L D  DLVAL  +    K   Q F
Sbjct:    1 TFYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSE-LAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDL-DSTDLVALSGAHTFGKSRCQFF 174          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 2.883e-41
Identity = 82/160 (51.25%), Postives = 113/160 (70.62%), Query Frame = 1
Query:  109 YSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            Y ++CP   +I+   ++     D R+ ASL+RLHFHDCFV+GCDAS+LLD T  +  EK A PN NS RGFEVID++K+ +E  C   VSCADIL +AA  SV +SGGP W V +GR+DSRTA++  A   LP P++++  L S+F+N+GL+ + D+VAL
Sbjct:   55 YRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLS-QTDMVAL 213          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.188e-40
Identity = 95/174 (54.60%), Postives = 119/174 (68.39%), Query Frame = 1
Query:   73 GSPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDST--NTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            G  S AQL+  FYS+TCPNV  I   ++++A  +D+R+ A ++RLHFHDCFV+GCD S+LLD+   + ++ EK A  N  S  GFEVID++K A+E  C  VVSCADIL IAAE SVAL+GGPS  V LGRRD RTA RA A   LP   +SL+ L S F +V   D  DLVAL
Sbjct:   18 GVLSNAQLTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKF-SVHNLDTTDLVAL 190          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.164e-40
Identity = 81/179 (45.25%), Postives = 115/179 (64.25%), Query Frame = 1
Query:   94 LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALLRSSHVWKGSVQIF 630
            L+  +Y STCP V ++I+  ++     D R  A +IRLHFHDCFV GCD S+LLD T T+  EK A+PN NS +G++++D +K  +E  C  VVSCAD+LTI A  +  L GGP W VP+GR+DS+TA+  LA  NLP P   L  + + F + GL+ + D+VAL+ +  + K   + F
Sbjct:   30 LTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVE-DMVALIGAHTIGKAQCRNF 207          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.275e-40
Identity = 88/181 (48.62%), Postives = 120/181 (66.30%), Query Frame = 1
Query:   88 AQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALLRSSHVWKGSVQIF 630
            AQL   FYS +CP    I+ +++++ F     + A+L+R+HFHDCFV GCDAS+L+DSTN   SEK A PN  S R F++ID +KA +E AC   VSCADI+T+A   SVAL+GGPS+++P GRRD R +N    +  LPGP+ S+    S F N G+N  FD VALL +  V +G+  +F
Sbjct:   22 AQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTN---SEKTAGPNG-SVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNN--LDVTLPGPTISVSGAVSLFTNKGMN-TFDAVALLGAHTVGQGNCGLF 195          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.084e-39
Identity = 88/165 (53.33%), Postives = 111/165 (67.27%), Query Frame = 1
Query:   94 LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            L   FY  +CP    I++  ++ A   D R+ ASL+RL FHDCFV GCDAS+LLD+   + SEK A PN NS RGFEVID +K  +E+AC   VSC+DIL +AA  SV L GGP W V LGRRDS  A+ A ANQ +P P++SLD L  +F+  GLN + DL+AL
Sbjct:   30 LLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQ-DLIAL 193          

HSP 2 Score: 24.2534 bits (51), Expect = 1.084e-39
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 2
Query:  578 LLHSSGAHTFGRAQC 622
            L+  SGAHT G+A+C
Sbjct:  190 LIALSGAHTIGKARC 204          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.603e-39
Identity = 86/168 (51.19%), Postives = 113/168 (67.26%), Query Frame = 1
Query:   88 AQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALL 591
            AQL   FYS +CPN   I+E+++++ F+ D  I A+L R+HFHDCFV GCDAS+L+D T +  SEK A PN  S RGFE+ID +K A+E  C   VSC+DI+T+A   +V L GGPS+ VP GRRD   +N   AN+ LP P  S++ + S F N G+N  FD VALL
Sbjct:   21 AQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNF-SVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMN-VFDSVALL 186          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.285e-38
Identity = 82/165 (49.70%), Postives = 113/165 (68.48%), Query Frame = 1
Query:   94 LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            LSP +Y  TCP   +I+ + +KKA S+D  + A+L+R+HFHDCFV GCD S+LLDS     +EK   P N S   F VIDN K A+E+ C  +VSCADIL++AA  +VALSGGP+WAVP GR+D R  ++A+  + LP P+ ++ +L+ +F   GL+   DLVAL
Sbjct:   23 LSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEK-DGPPNISLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGR-ISKAIETRQLPAPTFNISQLRQNFGQRGLS-MHDLVAL 184          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.653e-37
Identity = 85/172 (49.42%), Postives = 112/172 (65.12%), Query Frame = 1
Query:   76 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S + AQLS +FY  +CPN L+ I   +  A   + R+GASL+RLHFHDCFV GCDAS+LL+ T+    E+   PN   + RGF V++++KA VE  C  +VSCADIL +AA   V   GGPSW V LGRRDS TA+ A    +LP P++SL +L S++    LN   D+VAL
Sbjct:   25 SAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTS---GEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSDLPPPTSSLGQLLSAYNKKNLNPT-DMVAL 191          

HSP 2 Score: 24.6386 bits (52), Expect = 1.653e-37
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  590 SGAHTFGRAQC 622
            SGAHT G+AQC
Sbjct:  192 SGAHTIGQAQC 202          
The following BLAST results are available for this feature:
BLAST of CF835281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER1_WHEAT8.963e-4351.37Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER2_CUCSA7.588e-4252.84Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER40_ARATH2.883e-4151.25Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER58_ARATH3.188e-4054.60Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER11_ARATH4.164e-4045.25Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER57_ARATH9.275e-4048.62Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PER20_ARATH1.084e-3953.33Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER28_ARATH4.603e-3951.19Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER64_ARATH2.285e-3849.70Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER66_MAIZE1.653e-3749.42Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06P10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835281 ID=CF835281; Name=CF835281; organism=Citrus sinensis; type=EST; length=630bp
AGTACTCTTAGCCAAATGGCTTCACTTCGTTATCTTCTTCCATTAGCTCT
TGTTGTTGCTTTTGTGCTTGAGGGATCACCCTCTCAAGCTCAACTTTCTC
CATCTTTTTATTCTTCCACATGCCCTAATGTATTGAACATTATCGAGGAT
GTGCTTAAGAAAGCGTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCAT
CAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCTTCGATTT
TGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAAT
AATAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGT
TGAAAAGGCATGTCGAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTG
CGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCA
TTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAA
TCTTCCAGGACCATCTAATTCTCTTGATGAGCTCAAATCTAGTTTTAGAA
ATGTTGGCCTCAATGACAAGTTTGATCTTGTTGCACTCCTCCGGAGCTCA
CACGTTTGGAAGGGCTCAGTGCAAATTTTT
back to top