CF835281

Overview
NameCF835281
Unique NameCF835281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig940 contig Csv1_Contig940:22..650. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 8.409e-33
Identity = 75/165 (45.45%), Postives = 99/165 (60.00%), Query Frame = 1
Query:   94 LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            L   +Y S CP    I+  V  +  S    + A L+R+HFHDCFV GCD S+LL S    D+E+ A PN  + +G+EV+D  K A+E+ C  ++SCAD+L + A  +VA+ GGP W VPLGRRD R +    A  NLP P   +  LK +F N GLN K DLV L
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKN-DAERDAVPNL-TLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAK-DLVVL 187          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.195e-32
Identity = 80/162 (49.38%), Postives = 103/162 (63.58%), Query Frame = 1
Query:  106 FYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALL 591
            FY + C NV +I+  V++    S       ++R+HFHDCFV GCD S+LL + NT  SE+ A PN  S RGFEVI+  KA +EKAC R VSCADILT+AA  +V L+GG  W VPLGR D R +    ++ NLPGPS+S+ + K  F    LN   DLV L+
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL-AGNT--SERTAVPNR-SLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQ--ASDVNLPGPSDSVAKQKQDFAAKTLN-TLDLVTLV 195          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 75/161 (46.58%), Postives = 103/161 (63.98%), Query Frame = 1
Query:  106 FYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            FYSSTCP   +I++  ++  F SD  +   ++R+HFHDCFV GCD SIL++ +   D+E+ A PN N  +GF+VI++ K  +E  C  VVSCADIL +AA  SV  + G +W+VP GRRD R +  A A  +LP   +S+D  K  F   GLN + DLVAL
Sbjct:   36 FYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS---DAERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRAADAG-DLPAFFDSVDIQKRKFLTKGLNTQ-DLVAL 190          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.297e-32
Identity = 76/172 (44.19%), Postives = 104/172 (60.47%), Query Frame = 1
Query:   76 SPSQAQ-LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            +P+  Q L   FY   CP    I++  + +A  +D  I A L+R+ FHDCFV GC+ S+LL+  N  D EK + PN  + RGFE+IDN+KAA+EK C  +VSC+D+L + A  ++    GPSW V  GRRD    N   A  NLP P N++  L + F++ GL DK DLV L
Sbjct:   25 APTNVQGLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKKD-EKNSIPNL-TLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGL-DKKDLVVL 193          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.533e-31
Identity = 78/169 (46.15%), Postives = 105/169 (62.13%), Query Frame = 1
Query:   73 GSPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGG--PSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSF--RNVGLND 567
            G     QL   FYS  C NV NI+  V+ +AF  D  I  ++IRL+FHDCF +GCDAS+LLD +N   SEK A+P N S RG+EVID++K+AVEK C RVVSCADI+ +A    V L+ G    + +P GR D + ++  L   +LP P  ++ E  + F  R + LND
Sbjct:   21 GHGCYGQLRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSN---SEKKASP-NLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLV--DLPSPKMTVAETAAKFDQRKLSLND 183          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.026e-31
Identity = 75/150 (50.00%), Postives = 95/150 (63.33%), Query Frame = 1
Query:   82 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 525
            S   LS      +C  V + ++ V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PNNNS RGFEVI   K +V  +C  + VSCADIL IAA  S+A  GG ++ V LGR D+ TAN + A   LP PS++L
Sbjct:   67 SDKYLSQQLTQESC--VFSAVKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNL 214          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.906e-30
Identity = 80/176 (45.45%), Postives = 106/176 (60.23%), Query Frame = 1
Query:   73 GSPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALLRS 597
            G PS  +L        C  V + +++V+  A +++ R+GASLIRL FHDCFVDGCDA +LL+ T T   E+ AA NNNS RGF VI+  K  V+     + VSCADIL+IAA  S     G ++ V LGR+D+RTAN   AN  L GP+ +L    + F   G N   ++VALL S
Sbjct:   58 GKPSGGKLG----DEAC--VFSAVKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGT-EMVALLGS 226          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.754e-30
Identity = 73/172 (42.44%), Postives = 104/172 (60.47%), Query Frame = 1
Query:   82 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVEKA--CRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S AQL   FY+ TCPNV  I+ + ++K          + +RL+FHDCFV+GCDAS+++ STNT  +EK    N + A  GF+ +   K AV+    CR  VSCADILT+A    V L+GGP +AV LGRRD  +++ +     LP P+  L++L + F   GL+   D++AL
Sbjct:   23 SSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPN-DMIAL 193          

HSP 2 Score: 21.1718 bits (43), Expect = 4.754e-30
Identity = 8/11 (72.73%), Postives = 8/11 (72.73%), Query Frame = 2
Query:  590 SGAHTFGRAQC 622
            SGAHT G A C
Sbjct:  194 SGAHTLGFAHC 204          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.663e-30
Identity = 72/134 (53.73%), Postives = 89/134 (66.42%), Query Frame = 1
Query:  130 VLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 525
            V + +  V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PN NSARG+EVI   K +V   C  V VSCADIL IAA  SVA  GG +++V LGR D+RTAN + A   LP P ++L
Sbjct:   82 VFSAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNL 215          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.484e-29
Identity = 75/161 (46.58%), Postives = 98/161 (60.87%), Query Frame = 1
Query:  106 FYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            +Y S C NV +I+  V++  + ++      ++R+HFHDCFV GCDAS+LL   N   SE+ A PN  S RGF VI+  K  +E AC R VSCADIL +AA   V L+GGP W VPLGR D R +    +N  LPGP++S+   K  F    LN + DLV L
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPN---SERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRIS--LASNVILPGPTDSVAVQKLRFAEKNLNTQ-DLVVL 191          
The following BLAST results are available for this feature:
BLAST of CF835281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER1_ARATH8.409e-3345.45Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER69_ARATH3.195e-3249.38Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PERN1_TOBAC4.173e-3246.58Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER56_ARATH9.297e-3244.19Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER60_ARATH3.533e-3146.15Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER2_SOLLC6.026e-3150.00Suberization-associated anionic peroxidase 2 OS=So... [more]
PERA_IPOBA3.906e-3045.45Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER51_ARATH4.754e-3042.44Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER1_SOLLC6.663e-3053.73Suberization-associated anionic peroxidase 1 OS=So... [more]
PER70_ARATH1.484e-2946.58Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835281 ID=CF835281; Name=CF835281; organism=Citrus sinensis; type=EST; length=630bp
AGTACTCTTAGCCAAATGGCTTCACTTCGTTATCTTCTTCCATTAGCTCT
TGTTGTTGCTTTTGTGCTTGAGGGATCACCCTCTCAAGCTCAACTTTCTC
CATCTTTTTATTCTTCCACATGCCCTAATGTATTGAACATTATCGAGGAT
GTGCTTAAGAAAGCGTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCAT
CAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCTTCGATTT
TGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAAT
AATAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGT
TGAAAAGGCATGTCGAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTG
CGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCA
TTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAA
TCTTCCAGGACCATCTAATTCTCTTGATGAGCTCAAATCTAGTTTTAGAA
ATGTTGGCCTCAATGACAAGTTTGATCTTGTTGCACTCCTCCGGAGCTCA
CACGTTTGGAAGGGCTCAGTGCAAATTTTT
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