CF835281

Overview
NameCF835281
Unique NameCF835281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig940 contig Csv1_Contig940:22..650. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.532e-29
Identity = 72/170 (42.35%), Postives = 102/170 (60.00%), Query Frame = 1
Query:   88 AQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVEK--ACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            AQLS  FYS TCPNV  I+ + ++K          + +RL FHDCFV+GCDAS+++ ST    +EK    N + A  GF+V+   K A++   +CR  VSCADILT+A    V  +GGPS+ V LGR D   +  +    NLPGPS+++D+L + F    L  + D++AL
Sbjct:   25 AQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQE-DMIAL 193          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.307e-29
Identity = 71/134 (52.99%), Postives = 87/134 (64.93%), Query Frame = 1
Query:  130 VLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 525
            V + +  V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PN NSARG+EVI   K +V   C  + VSCADIL IAA  SVA  GG ++ V LGR D+RTAN   A   LP P ++L
Sbjct:   81 VFSAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNL 214          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 4.319e-29
Identity = 64/162 (39.51%), Postives = 96/162 (59.26%), Query Frame = 1
Query:   85 QAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDK 570
            ++ L   +Y  +CP    II   ++  ++    +   +IRL FHDCF++GCDAS+LLD+     SEK A+PN  S +GF+VID +K+ +E  C  VVSCAD+L +AA  +V ++GGP + +  GR+DS  A R  A   LP P  +L  +   F   G N++
Sbjct:   65 RSYLHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNL-SLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNER 225          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 8.675e-29
Identity = 72/173 (41.62%), Postives = 106/173 (61.27%), Query Frame = 1
Query:   73 GSPSQAQ-LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            G P  A+ LS ++Y  +CP    I+++ +  A  +D  + A LIR+ FHDCF++GCDASILLDST    +EK  +P N S RG+E+ID+ K  +E  C  VVSCADI+ +AA  +V  +GGP + +P GR D +  ++    +NLP P  +  +L  +F   G   + D+VAL
Sbjct:   18 GFPFHARGLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEK-DSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQ-DVVAL 187          

HSP 2 Score: 21.557 bits (44), Expect = 8.675e-29
Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  590 SGAHTFGRAQC 622
            SGAHT G A+C
Sbjct:  188 SGAHTLGVARC 198          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.621e-29
Identity = 71/172 (41.28%), Postives = 101/172 (58.72%), Query Frame = 1
Query:   88 AQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALLRSSH 603
            AQL   FY  TCP   +I+  V+   +  +  + A+L+R+ FHDC V GCDAS+L+D T    SEK +   N   RGFE+ID  K  +E  C + VSCADI+TIA   S+AL+GGP + V  GRRD   +N   ++  L GP+ S+     +F+++G N    +VAL+   H
Sbjct:   20 AQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNP--SDVKLLGPTVSVATSIKAFKSIGFNVS-TMVALIGGGH 187          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.143e-28
Identity = 70/169 (41.42%), Postives = 99/169 (58.58%), Query Frame = 1
Query:   82 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S A LS +FY+S+C     ++ + ++ A SSD  I   L+RL FHDCFV GCDAS+L+   +T  S+    P N S  GF VID  K A+E  C   VSCADI+ +AA  +V  +GGP   +P GRRD + +  A    N+     +LD++  +F + GL+ + DLV L
Sbjct:   25 SSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNSTEKSD----PGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQ-DLVVL 188          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.799e-28
Identity = 64/148 (43.24%), Postives = 90/148 (60.81%), Query Frame = 1
Query:  130 VLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDK 570
            V + +++++  A +++ R+GASLIRLHFHDCFVDGCD  ILL+ T     E+ A  N+NS RGF VID  K   +  C    VSCAD+L IAA  +       ++ + LGR+D+RTAN   AN  LP P ++L    + F + G N +
Sbjct:   72 VFSAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR 219          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.799e-28
Identity = 74/180 (41.11%), Postives = 105/180 (58.33%), Query Frame = 1
Query:   70 EGSPSQAQLSPS----FYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVEKAC-RRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRT-ANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            +G+  Q  L+P     FY  +CP   +I+   ++ A   D+ + A L+RLHFHDCFV GCDAS+LLD + T   E+ A PN       F+ I+++   + K C   VVSC+D+L +AA  SV +SGGPS+ VPLGRRDS + A +      LP P+ ++  L +    + L D  DLVAL
Sbjct:   29 DGNARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINL-DATDLVAL 207          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.656e-28
Identity = 77/168 (45.83%), Postives = 108/168 (64.29%), Query Frame = 1
Query:   94 LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAA-ERSVALSGGP-SWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            L   +Y  TCP    I++  ++KA + +   GA++IR+ FHDCFV+GCDAS+LLD T  +   EK AAPNN S RGFE+ID +K A+E AC  VVSCADI+  AA + S  LS G  S+ +P GR D   +N + + + L  P+++L +L SSF   G++ + DLV L
Sbjct:   35 LELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLE-DLVVL 201          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.775e-28
Identity = 70/170 (41.18%), Postives = 101/170 (59.41%), Query Frame = 1
Query:   88 AQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVE--KACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            AQL  +FY ++CPNV  I++ V+++          + +RL FHDCFV+GCDAS+++ ST T  +EK    N + A  GF+V+   K A++   +C+  VSCADIL +A    V  + GPS+AV LGR D   +  A  N NLPGP+N + EL   F    L  + D++AL
Sbjct:   25 AQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQE-DMIAL 193          
The following BLAST results are available for this feature:
BLAST of CF835281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER35_ARATH2.532e-2942.35Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PERX_SOLTU3.307e-2952.99Suberization-associated anionic peroxidase OS=Sola... [more]
PER48_ARATH4.319e-2939.51Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER47_ARATH8.675e-2941.62Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER8_ARATH9.621e-2941.28Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER46_ARATH2.143e-2841.42Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PERN_IPOBA2.799e-2843.24Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER1_SORBI2.799e-2841.11Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER2_MAIZE3.656e-2845.83Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER73_ARATH4.775e-2841.18Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835281 ID=CF835281; Name=CF835281; organism=Citrus sinensis; type=EST; length=630bp
AGTACTCTTAGCCAAATGGCTTCACTTCGTTATCTTCTTCCATTAGCTCT
TGTTGTTGCTTTTGTGCTTGAGGGATCACCCTCTCAAGCTCAACTTTCTC
CATCTTTTTATTCTTCCACATGCCCTAATGTATTGAACATTATCGAGGAT
GTGCTTAAGAAAGCGTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCAT
CAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCTTCGATTT
TGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAAT
AATAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGT
TGAAAAGGCATGTCGAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTG
CGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCA
TTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAA
TCTTCCAGGACCATCTAATTCTCTTGATGAGCTCAAATCTAGTTTTAGAA
ATGTTGGCCTCAATGACAAGTTTGATCTTGTTGCACTCCTCCGGAGCTCA
CACGTTTGGAAGGGCTCAGTGCAAATTTTT
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