CF835281

Overview
NameCF835281
Unique NameCF835281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig940 contig Csv1_Contig940:22..650. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.236e-28
Identity = 71/170 (41.76%), Postives = 98/170 (57.65%), Query Frame = 1
Query:   82 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S AQLS ++Y+STCP+V  I++  +   F   +    + +R+ FHDCFV+GCDAS+ + S N  D+EK A  N + A  GF+ +   K AVE  C  VVSCADIL +AA   V L GGP + V LGRRD   +  +     LP P   +  L   F + GL+   D++AL
Sbjct:   28 SNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENE-DAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLS-LTDMIAL 195          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.236e-28
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = 1
Query:   88 AQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARG--FEVIDNMKAAVEKA--CRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            AQL  +FY  +CPNV  I+ + +++ F        + +RL FHDCFV GCDASILL S +  D      P++ S  G  F+ +   K A+++   CR  VSCADIL +A    V L+GGP++ V LGRRD R +  A    +LP PS  LD+L + F   GL+ + D++AL
Sbjct:   23 AQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPSEKDH-----PDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLS-QTDMIAL 187          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.064e-27
Identity = 68/170 (40.00%), Postives = 104/170 (61.18%), Query Frame = 1
Query:   82 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            +Q++L+ +FYS TCP  L+II D +     ++    A++IRL FHDCF +GCDAS+L+ ST    +E+ ++ N +    GF+VI   K A+E AC   VSC+DI+++A    +   GGP + V LGRRDSRT+  +L    LP PS  + ++   F + G   + ++VAL
Sbjct:   17 AQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVAL 185          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.095e-27
Identity = 69/172 (40.12%), Postives = 102/172 (59.30%), Query Frame = 1
Query:   82 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVEKA--CRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S AQL  +FY+ +CPNV  I+ + ++K          + +RL+FHDCFV+GCDAS+++ STN   +EK    N + A  GF+ +   K A++    CR  VSCADILT+A    V L+GGP + V LGR D  ++  A     LP P++ +++L S F   GL+   D++AL
Sbjct:   23 SSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLN-DMIAL 193          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.095e-27
Identity = 69/171 (40.35%), Postives = 98/171 (57.31%), Query Frame = 1
Query:   88 AQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARG--FEVIDNMKAAVEKA--CRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            AQL   FY ++CPNV  I+ + +++ F        + +RL FHDCFV GCDASI++ S +  D      P++ S  G  F+ +   K AV+    CR  VSCADIL +A    V L+GGPS+ V LGRRD R + +A     LP P  +L++L   F   GL+ + D++AL
Sbjct:   25 AQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSERDH-----PDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLS-QTDMIAL 189          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 9.005e-27
Identity = 73/175 (41.71%), Postives = 102/175 (58.29%), Query Frame = 1
Query:   79 PSQAQLSPSFYS--STCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALLRS 597
            PS  +L+  +Y   +TC N  N +   ++  + +D  I   L+RL + DCFV GCDAS+LL+  N   SEK A P N    GF +ID +K  +E+ C  VVSCADIL +A   +V L+G PS+ V  GRRD  T+++     +LP PS S D+  S F++ GLN   D+  LL S
Sbjct:   30 PSMQKLTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGPN---SEKMA-PQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTV--DLPSPSISWDQAMSYFKSRGLN-VLDMATLLGS 197          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.205e-26
Identity = 64/170 (37.65%), Postives = 101/170 (59.41%), Query Frame = 1
Query:   82 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            +++ L+  FYS +CP  L+II + +     S     A+ +RL FHDCF +GCDAS+L+ ST    +E+ ++ N +    GF+V+   K A+E AC   VSC+DI+ +A    +   GGP + + LGRRDSRT+  +L +  LP PS  + +L   F + G + + ++VAL
Sbjct:   28 AESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVAL 196          

HSP 2 Score: 21.9422 bits (45), Expect = 2.205e-26
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 2
Query:  590 SGAHTFGRAQCK 625
            SGAHT G + CK
Sbjct:  197 SGAHTIGFSHCK 208          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.620e-26
Identity = 69/171 (40.35%), Postives = 98/171 (57.31%), Query Frame = 1
Query:   76 SPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            S S A+LS +FY+ +CP    I+ + ++ A SSD  +   L+RL FHDCFV GCD S+L+    T  S+    P N S  GF VI+++K  +E  C   VSCADIL +AA  +V   GGP   +P GRRD R +  A    N+     ++D++ + F + GL+   DLV L
Sbjct:   25 SSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSD----PGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLS-VHDLVVL 190          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 8.228e-26
Identity = 70/170 (41.18%), Postives = 97/170 (57.06%), Query Frame = 1
Query:   85 QAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDS-TNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALS-GGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVAL 588
            + +L  +FY ++CP   +I+  ++ K   ++  +   L+R+H+HDCFV GCDAS+LLDS      SEK A P N S  GFE+ID +K  +EK C   VSCADILT+AA  +V+     P W V  GR D R +    A ++LP    +   L+  F    L D  DLVAL
Sbjct:   43 EGKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARP-NLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVAL 210          

HSP 2 Score: 21.557 bits (44), Expect = 8.228e-26
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  578 LLHSSGAHTFGRAQC 622
            L+  SGAHT G A C
Sbjct:  207 LVALSGAHTIGIAHC 221          
BLAST of CF835281 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.897e-25
Identity = 69/180 (38.33%), Postives = 102/180 (56.67%), Query Frame = 1
Query:   79 PSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDELKSSFRNVGLNDKFDLVALLRSSHVWKGS 618
            P    LS ++Y   CP+   I+   +++   SD  +G +L+RL FHDC V GCDAS+LLD   T    +  +P + + RGFE+ID++K+ +EK+C   VSCADILT A+  +    GGP W    GRRDS+  + A   + +P     +  L  +F++ GLN   DLV L  +  + K S
Sbjct:   46 PLDNLLSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEGT----ERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSK-HSYARDVEKVPSGRRDVTALLETFQSYGLN-VLDLVVLSGAHTIGKAS 219          
The following BLAST results are available for this feature:
BLAST of CF835281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER55_ARATH6.236e-2841.76Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER16_ARATH6.236e-2841.52Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER31_ARATH1.064e-2740.00Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER50_ARATH3.095e-2740.12Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER45_ARATH3.095e-2740.35Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER26_ARATH9.005e-2741.71Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER63_ARATH2.205e-2637.65Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER18_ARATH2.620e-2640.35Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER24_ARATH8.228e-2641.18Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER7_ARATH2.897e-2538.33Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835281 ID=CF835281; Name=CF835281; organism=Citrus sinensis; type=EST; length=630bp
AGTACTCTTAGCCAAATGGCTTCACTTCGTTATCTTCTTCCATTAGCTCT
TGTTGTTGCTTTTGTGCTTGAGGGATCACCCTCTCAAGCTCAACTTTCTC
CATCTTTTTATTCTTCCACATGCCCTAATGTATTGAACATTATCGAGGAT
GTGCTTAAGAAAGCGTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCAT
CAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCTTCGATTT
TGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAAT
AATAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGT
TGAAAAGGCATGTCGAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTG
CGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCA
TTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAA
TCTTCCAGGACCATCTAATTCTCTTGATGAGCTCAAATCTAGTTTTAGAA
ATGTTGGCCTCAATGACAAGTTTGATCTTGTTGCACTCCTCCGGAGCTCA
CACGTTTGGAAGGGCTCAGTGCAAATTTTT
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