CF835282

Overview
NameCF835282
Unique NameCF835282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835282 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.885e-47
Identity = 91/158 (57.59%), Postives = 117/158 (74.05%), Query Frame = -2
Query:  183 RNVGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTP-GADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNNNI 653
            +NVGL+   DLVALSG HTFG++QC+F  DRLY+F +TG PDPT+D++ L  LR+ CP+ GN +VL +FD++TP  FDNKY+ NL+  KGL+QSDQELFS+P  ADT  +V  +   Q  FF  FV ++IRM +L PLTG QGEIRLNCR VN  + I
Sbjct:  175 KNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFFDAFVKAIIRMSSLSPLTGKQGEIRLNCRVVNSKSKI 332          
BLAST of CF835282 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.768e-47
Identity = 90/159 (56.60%), Postives = 116/159 (72.96%), Query Frame = -2
Query:  150 DLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNNNIATRSSSSEGDL 626
            D+V+LSGAHTFGR QC  F++RL++FN TG PDPT++ TLL  L++LCPQ G+   + N D+ TPDAFDN YF+NL+   GLLQSDQELFS  G+ T  IV  F  NQT FF+ FV SMI+MGN+ PLTG+ GEIR +C+ VNG +     S++  GD+
Sbjct:  192 DVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQNGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVNGQS-----SATEAGDI 345          
BLAST of CF835282 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.768e-47
Identity = 91/158 (57.59%), Postives = 116/158 (73.42%), Query Frame = -2
Query:  183 RNVGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNNNI 653
            +NVGL+   DLVALSG HTFG+ QC+F  DRLY+F+ TG PDPT+D++ L  LR+ CP+ GN +VL +FD++TP  FDNKY+ NL+  KGL+QSDQELFS+P A DT  +V ++   Q  FF  F  +MIRM +L PLTG QGEIRLNCR VN  + I
Sbjct:  175 KNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSLSPLTGKQGEIRLNCRVVNSKSKI 332          
BLAST of CF835282 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.432e-46
Identity = 91/154 (59.09%), Postives = 113/154 (73.38%), Query Frame = -2
Query:  189 VGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNN 647
            VGL+   DLVALSG HTFG+ QC+F  DRLY+F+ TG PDPT++ T L+ LR+ CP  GN +VL +FD++TP  FDNKY+ NL+ +KGL+QSDQELFS+P A DT  +V  F      FF  FV +M RMGN+ PLTG QGEIRLNCR VN N+
Sbjct:  183 VGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNS 336          
BLAST of CF835282 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.870e-46
Identity = 91/156 (58.33%), Postives = 113/156 (72.44%), Query Frame = -2
Query:  189 RNVGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNN 653
            RNVGL+   DLVALSG HTFG+ QC+F  DRLY+F+ TG PDPT++ T L+ LR LCP  GN + L +FD++TP  FDNKY+ NL+ RKGL+QSDQELFS+P A DT  +V  +      FF  FV +M RMGN+ P TG QG+IRLNCR VN N+
Sbjct:  183 RNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNRSALVDFDLRTPTVFDNKYYVNLKERKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNS 338          
BLAST of CF835282 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.166e-46
Identity = 90/156 (57.69%), Postives = 115/156 (73.72%), Query Frame = -2
Query:  189 RNVGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNN 653
            +NVGL+   DLVALSGAHTFG+ QC+F  DRLY+F+ TG PDPT++ T L+ LR  CP+ GN +VL +FD++TP  FDNKY+ NL+ +KGL+QSDQELFS+P A DT  +V  +      FF  FV +M RMGN+ P TG QG+IRLNCR VN N+
Sbjct:  184 KNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQSVLVDFDLRTPLVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNS 339          
BLAST of CF835282 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 181.415 bits (459), Expect = 3.526e-45
Identity = 88/156 (56.41%), Postives = 113/156 (72.44%), Query Frame = -2
Query:  189 RNVGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVNGNN 653
            +NVGL+   DLVALSG HTFG+ QC+F  DRLY+F+ TG PDPT++ T L+ LR  CP+ GN  VL +FD++TP  FDNKY+ NL+  KGL+Q+DQELFS+P A DT  +V ++      FF  FV +M RMGN+ PLTG QG+IR NCR VN N+
Sbjct:  182 QNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQTVLVDFDLRTPTVFDNKYYVNLKELKGLIQTDQELFSSPNATDTIPLVREYADGTQKFFNAFVEAMNRMGNITPLTGTQGQIRQNCRVVNSNS 337          
BLAST of CF835282 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.899e-44
Identity = 86/147 (58.50%), Postives = 109/147 (74.15%), Query Frame = -2
Query:  198 DKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGN-GAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 635
            D  DLVALSGAHTFGRA+C  F  RL++FN +G PD TVD T L+ L+ +CPQGGN G    N D+ TP+ FDN YF+NL+  +GLLQ+DQELFST G+ T AIV  +  +QT FF +FV SMI++GN+ PLTG  G+IR +C+RVN
Sbjct:  178 DLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
BLAST of CF835282 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.891e-39
Identity = 78/147 (53.06%), Postives = 105/147 (71.43%), Query Frame = -2
Query:  198 DKFDLVALSGAHTFGRAQCKFFSDRLYDFN-KTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGADTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 635
            D  DLVALSGAHTFGR QC   ++RL++F+  +G+ DP+++   L+ LR  CPQGG+    AN D  +PD+FDN YF NL+  +G+++SDQ LFS+ GA T ++V  F  NQ  FF NF  SMI+MGN++ LTG +GEIR +CRRVN
Sbjct:  183 DTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQGGDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGNVRILTGREGEIRRDCRRVN 329          
BLAST of CF835282 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.643e-35
Identity = 81/152 (53.29%), Postives = 102/152 (67.11%), Query Frame = -2
Query:  198 VGLNDKFDLVALSGAHTFGRAQCKFFSDRLYDFNKTGKPDPTVDRTLLKQLRELCPQGGNGAVLANFDVKTPDAFDNKYFSNLRLRKGLLQSDQELFSTPGA--DTAAIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 647
            VGLN   D+VALSGAHTFG+A+C  FS+RL++F   G PD T++ TLL  L+ +CP GGNG   A  D  + DAFDN YF NL   KGLL SDQ LFS+  A   T  +VE + R+Q  FF++F  SMIRMG+L  + G  GE+R NCR +N
Sbjct:  179 VGLNVT-DVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPLDRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFTCSMIRMGSL--VNGASGEVRTNCRVIN 327          
The following BLAST results are available for this feature:
BLAST of CF835282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
PER38_ARATH2.885e-4757.59Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER54_ARATH3.768e-4756.60Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER37_ARATH3.768e-4757.59Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER1B_ARMRU1.432e-4659.09Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER34_ARATH1.870e-4658.33Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER33_ARATH4.166e-4657.69Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER32_ARATH3.526e-4556.41Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PERX_TOBAC3.899e-4458.50Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER58_ARATH2.891e-3953.06Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PERN_ARMRU5.643e-3553.29Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835282 ID=CF835282; Name=CF835282; organism=Citrus sinensis; type=EST; length=654bp
TTTTTTTTTCCATTAACTCAAGTTTGATAGTTAATTTATTTGAAAACACC
TCTCATGTTTCAGGCCAAACGATAAGATTAAATTCGAGTTTGTTAAGCAC
AAAAACTCTCTCGCATATGCCGCAAGCTAGCTTATTAGAAAGAGCTGACC
AAATCACCCTCCGATGATGATGATCTTGTTGCAATATTATTGTTTCCATT
GACCCTCCTGCAGTTCAATCTAATCTCCCCTTGATTTCCTGTCAGTGGTT
TCAAATTGCCCATTCTTATCATTGAGATCACAAAGTTTTTAAAGAAAGCA
GTCTGGTTCCTCCCAAAGTCCTCGACAATGGCAGCGGTATCGGCACCAGG
AGTCGAAAACAACTCTTGATCACTCTGCAGAAGGCCTTTGCGGAGTCTAA
GATTGGAGAAGTATTTGTTGTCGAAAGCATCAGGTGTTTTGACATCAAAA
TTAGCAAGAACGGCGCCGTTTCCACCCTGTGGGCATAGTTCCCTCAGTTG
CTTTAAGAGGGTTCTGTCCACTGTTGGGTCTGGCTTGCCAGTTTTGTTGA
AATCGTATAATCTGTCACTGAAAAATTTGCACTGAGCCCTTCCAAACGTG
TGAGCTCCGGAGAGTGCAACAAGATCAAACTTGTCATTGAGGCCAACATT
TCTA
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