CF835294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.930e-14 Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 98 MPIYRIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 +P+ ++ +G GEA P L+A E +FVF G S + K GGA A + +A++A A + V + G ++SGGH+NPAVT VGGHITL R Sbjct: 4 LPMTKLELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGKAA-GGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFR 104
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.614e-14 Identity = 43/99 (43.43%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 110 RIAIGTPGEASHPDALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAG-LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 ++ +G GEAS PD + L E +FVF G G+ M T G ST G L + +L A + V + G +ISGGHVNPAVT VGGH+TL R Sbjct: 3 KLTLGHRGEASEPDFFRGVLGELVLTFLFVFIGVGAAMTDGATTKG--STAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFR 99
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 9.576e-14 Identity = 43/87 (49.43%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 146 PDALKAGLAEFFSMLIFVFAGQGSGMAFSKL-TDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 P A +A L+EF + +FVFA +GS K+ D G T GL+ ++AHA AL AV+V N SGGHVNPAVTFG VG I+ R Sbjct: 25 PGATRAALSEFVATAVFVFAAEGSVYGLWKMYRDTG--TLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFAR 109
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.133e-13 Identity = 38/81 (46.91%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 152 ALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAG-LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHI 391 +L++ LAEF S +FVF GS ++ LT ++ AG L++ ++A AF LF AV + A++SGGHVNPAVTF +GG I Sbjct: 18 SLRSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRI 98
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.081e-12 Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 2 Query: 149 DALKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITL 397 +AL+ ++EF S FV A GS M+ KL G S P G++ ++A+A AL +V + N+SGGHVNPAVTF V G I++ Sbjct: 20 NALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISV 102
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.963e-12 Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 134 EASHPDA--LKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 EA PD ++A LAE +FVF G + MA G + P A L + ++AHA A V V+ G ++SGGH+NPAVT G V GHIT LR Sbjct: 16 EAPAPDVGCVRAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLR 108
BLAST of CF835294 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.448e-11 Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 2 Query: 155 LKAGLAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLR 403 ++A LAE +FVF G + MA G + P A L + ++AHA A V V+ G ++SGGH+NPAVT G V GHIT LR Sbjct: 23 VRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLR 106 The following BLAST results are available for this feature:
BLAST of CF835294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835294 ID=CF835294; Name=CF835294; organism=Citrus sinensis; type=EST; length=403bpback to top |