CF835305

Overview
NameCF835305
Unique NameCF835305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9834 contig Csv1_Contig9834:200..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSJ (Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CAM1-1 PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.175e-56
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = -1 
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -1 
Query:  331 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 561
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSI (Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1-1 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.175e-56
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = -1 
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -1 
Query:  331 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 561
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.175e-56
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = -1 
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -1 
Query:  331 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 561
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_CAPAN (Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 2.617e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = -1 
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149

HSP 2 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -1 
Query:  331 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 561
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM5_SOLTU (Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE=1 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 2.617e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = -1 
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149
[Close]
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSI (Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 2.617e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = -1 
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149

HSP 2 Score: 67.3958 bits (163), Expect = 7.461e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -1 
Query:  331 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 561
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM2_SOLTU (Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=PCM2 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.617e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = -1 
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   16 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 124
[Close]
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM2_ORYSJ (Calmodulin-2 OS=Oryza sativa subsp. japonica GN=CAM2 PE=2 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 2.617e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = -1 
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM2_ORYSI (Calmodulin-2 OS=Oryza sativa subsp. indica GN=CAM2 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.617e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = -1 
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA+KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM2_ARATH (Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 PE=1 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 2.617e-56
Identity = 108/109 (99.08%), Postives = 109/109 (100.00%), Query Frame = -1 
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -1 
Query:  331 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 561
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
The following BLAST results are available for this feature:
BLAST of CF835305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 390
Match NameE-valueIdentityDescription
CALM1_ORYSJ1.175e-56100.00Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM1_ORYSI1.175e-56100.00Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1... [more]
CALM1_DAUCA1.175e-56100.00Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 ... [more]
CALM_CAPAN2.617e-5699.08Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3[more]
CALM5_SOLTU2.617e-5699.08Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE... [more]
CALM3_ORYSI2.617e-5699.08Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3... [more]
CALM2_SOLTU2.617e-5699.08Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=... [more]
CALM2_ORYSJ2.617e-5699.08Calmodulin-2 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM2_ORYSI2.617e-5699.08Calmodulin-2 OS=Oryza sativa subsp. indica GN=CAM2... [more]
CALM2_ARATH2.617e-5699.08Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835305 ID=CF835305; Name=CF835305; organism=Citrus sinensis; type=EST; length=657bp
TTTTTTTTTTTTTTTTAGAGGAAAAACATTAAGTCATCACATATCAATTT
CTTATCCACAAAATCTCGAAATAAGAAATAGGGCAGATCAACGAGTCACT
CATTTAACAGAAACAATGTTCACAGAAGAGCGGAAAAAAACTAAAACATT
AAAAAATTGCTCAAAAGATCCCGCCCCCAGATAAATTGAAGCAGGAGACA
ACATGCTTCCTTTAGCTTGACCTCAGAGTTATCAAATTAAAATTTATAAA
AAAGGAAACTAGGGAACCAATTATATTAATCAACCAATTTCTTCTTTTCC
CAGGAAGTTTTGGTTGGGTGGAGTCACTTACTTAGCCATCATAACCTTGA
CAAATTCCTCGTAATTTATCTGGCCATCACCATCGACATCAGCTTCCCTT
ATCATCTCATCGACTTCCTCATCAGTAAGCTTCTCCCCTAGGTTTGTCAT
CACATGGCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGA
AAACCCGGAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATC
TTCCTGGCCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTACC
ATCAGCATCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAGTGGGGT
TCTGACC
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