CF835305

Overview
NameCF835305
Unique NameCF835305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length657
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_PNECA (Calmodulin OS=Pneumocystis carinii PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.372e-49
Identity = 94/109 (86.24%), Postives = 103/109 (94.50%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDM+NEVDADGNGTIDFPEFL +MARKMKD DSEEE++EAF+VFDKD NG ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG I+Y EFVK+M++K
Sbjct:   43 GQNPTEAELQDMVNEVDADGNGTIDFPEFLAMMARKMKDVDSEEEIREAFKVFDKDGNGIISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGVIDYSEFVKMMLSK 151          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_PARTE (Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 3.099e-49
Identity = 94/109 (86.24%), Postives = 104/109 (95.41%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMK+ DSEEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTD+EVDEMIREAD+DGDG INYEEFV++M++K
Sbjct:   41 GQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVSK 149          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_BLAEM (Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE=3 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 3.099e-49
Identity = 94/109 (86.24%), Postives = 105/109 (96.33%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAEL  MINEVDADGNGTIDFPEFL +MARKMKD+DSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKL+++EV+EMIREADVDGDGQINYEEFVK+MM+K
Sbjct:   41 GQNPTEAELLVMINEVDADGNGTIDFPEFLTMMARKMKDSDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLSEDEVEEMIREADVDGDGQINYEEFVKMMMSK 149          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_CHLRE (Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 6.903e-49
Identity = 93/106 (87.74%), Postives = 103/106 (97.17%), Query Frame = -1
Query:  340 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 657
            GQNPTEAELQDMI+EVDADGNGTIDFPEFL LMARKMK+TD E+EL+EAF+VFDKD NGFISAAELRHVMTNLGEKL++EEVDEMIREADVDGDGQ+NYEEFV++M
Sbjct:   44 GQNPTEAELQDMISEVDADGNGTIDFPEFLMLMARKMKETDHEDELREAFKVFDKDGNGFISAAELRHVMTNLGEKLSEEEVDEMIREADVDGDGQVNYEEFVRMM 149          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALM_DICDI (Calmodulin OS=Dictyostelium discoideum GN=calA PE=1 SV=3)

HSP 1 Score: 192.971 bits (489), Expect = 1.177e-48
Identity = 90/109 (82.57%), Postives = 105/109 (96.33%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMINEVDADGNG IDFPEFL +MARKM+DTD+EEE++EAF+VFDKD NG+ISAAELRHVMT+LGEKLT+EEVDEMIREAD+DGDGQ+NY+EFVK+M+ +
Sbjct:   43 GQNPTEAELQDMINEVDADGNGNIDFPEFLTMMARKMQDTDTEEEIREAFKVFDKDGNGYISAAELRHVMTSLGEKLTNEEVDEMIREADLDGDGQVNYDEFVKMMIVR 151          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALMF_NAEGR (Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.008e-48
Identity = 93/109 (85.32%), Postives = 100/109 (91.74%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAEL DMINEVDADGNGTIDF EFL +MA+KMKDTD+EEE+KEAF+VFDKD NGFISA ELRHVM NLGEKLTDEEVDEMIREAD+DGD QINY EFVK+MM K
Sbjct:   47 GQNPTEAELHDMINEVDADGNGTIDFTEFLTMMAKKMKDTDNEEEIKEAFKVFDKDGNGFISAQELRHVMCNLGEKLTDEEVDEMIREADIDGDNQINYTEFVKMMMQK 155          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CML1_ORYSI (Calmodulin-like protein 1 OS=Oryza sativa subsp. indica GN=CML1 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.474e-48
Identity = 94/109 (86.24%), Postives = 100/109 (91.74%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDMI+EVDAD NG I+F EFL LMARK++D DSEEELKEAFRVFDKDQNGFISAAELRHVM N+GE+LTDEEV EMI EADVDGDGQINYEEFVK MMAK
Sbjct:   41 GQNPTEAELQDMISEVDADSNGNIEFKEFLGLMARKLRDKDSEEELKEAFRVFDKDQNGFISAAELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEFVKCMMAK 149          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALMS_CHICK (Calmodulin, striated muscle OS=Gallus gallus GN=CCM1 PE=3 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 7.632e-48
Identity = 90/109 (82.57%), Postives = 103/109 (94.50%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDM+ EVDADG+GTIDFPEFL+LMARKM+D+DSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMI+EAD + DGQ+NYEEFV++M  K
Sbjct:   41 GQNPTEAELQDMVGEVDADGSGTIDFPEFLSLMARKMRDSDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIKEADCNNDGQVNYEEFVRMMTEK 149          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALL3_RAT (Calmodulin-like protein 3 OS=Rattus norvegicus GN=Calml3 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 7.632e-48
Identity = 87/109 (79.82%), Postives = 102/109 (93.58%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAELQDM+NE+D DGNGT+DFPEFL +M+RKMKDTDSEEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMI+ AD DGDGQ+NYEEFV ++++K
Sbjct:   41 GQNPTEAELQDMVNEIDKDGNGTVDFPEFLTMMSRKMKDTDSEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIQAADTDGDGQVNYEEFVHMLVSK 149          
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CALL3_HUMAN (Calmodulin-like protein 3 OS=Homo sapiens GN=CALML3 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 9.968e-48
Identity = 87/109 (79.82%), Postives = 103/109 (94.50%), Query Frame = -1
Query:  331 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 657
            GQNPTEAEL+DM++E+D DGNGT+DFPEFL +MARKMKDTD+EEE++EAFRVFDKD NGF+SAAELRHVMT LGEKL+DEEVDEMIR AD DGDGQ+NYEEFV+V+++K
Sbjct:   41 GQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVLVSK 149          
The following BLAST results are available for this feature:
BLAST of CF835305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 390
Match NameE-valueIdentityDescription
CALM_PNECA2.372e-4986.24Calmodulin OS=Pneumocystis carinii PE=3 SV=1[more]
CALM_PARTE3.099e-4986.24Calmodulin OS=Paramecium tetraurelia GN=CAM PE=1 S... [more]
CALM_BLAEM3.099e-4986.24Calmodulin OS=Blastocladiella emersonii GN=CMD1 PE... [more]
CALM_CHLRE6.903e-4987.74Calmodulin OS=Chlamydomonas reinhardtii PE=1 SV=2[more]
CALM_DICDI1.177e-4882.57Calmodulin OS=Dictyostelium discoideum GN=calA PE=... [more]
CALMF_NAEGR2.008e-4885.32Calmodulin, flagellar OS=Naegleria gruberi GN=CAM1... [more]
CML1_ORYSI4.474e-4886.24Calmodulin-like protein 1 OS=Oryza sativa subsp. i... [more]
CALMS_CHICK7.632e-4882.57Calmodulin, striated muscle OS=Gallus gallus GN=CC... [more]
CALL3_RAT7.632e-4879.82Calmodulin-like protein 3 OS=Rattus norvegicus GN=... [more]
CALL3_HUMAN9.968e-4879.82Calmodulin-like protein 3 OS=Homo sapiens GN=CALML... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835305 ID=CF835305; Name=CF835305; organism=Citrus sinensis; type=EST; length=657bp
TTTTTTTTTTTTTTTTAGAGGAAAAACATTAAGTCATCACATATCAATTT
CTTATCCACAAAATCTCGAAATAAGAAATAGGGCAGATCAACGAGTCACT
CATTTAACAGAAACAATGTTCACAGAAGAGCGGAAAAAAACTAAAACATT
AAAAAATTGCTCAAAAGATCCCGCCCCCAGATAAATTGAAGCAGGAGACA
ACATGCTTCCTTTAGCTTGACCTCAGAGTTATCAAATTAAAATTTATAAA
AAAGGAAACTAGGGAACCAATTATATTAATCAACCAATTTCTTCTTTTCC
CAGGAAGTTTTGGTTGGGTGGAGTCACTTACTTAGCCATCATAACCTTGA
CAAATTCCTCGTAATTTATCTGGCCATCACCATCGACATCAGCTTCCCTT
ATCATCTCATCGACTTCCTCATCAGTAAGCTTCTCCCCTAGGTTTGTCAT
CACATGGCGCAGCTCAGCAGCTGAGATGAAACCATTCTGATCCTTGTCGA
AAACCCGGAAGGCCTCTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATC
TTCCTGGCCATGAGGTTTAGGAATTCAGGAAAATCAATAGTTCCATTACC
ATCAGCATCCACTTCATTGATCATGTCCTGGAGCTCAGCCTCAGTGGGGT
TCTGACC
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