CF835305
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: TNNC2_PIG (Troponin C, skeletal muscle OS=Sus scrofa GN=TNNC2 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.186e-24 Identity = 53/109 (48.62%), Postives = 79/109 (72.48%), Query Frame = -1 Query: 340 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 657 GQ PT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD++ +G+I A EL + GE +TDEE++ ++++ D + DG+I+++EF+K+M Sbjct: 47 GQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNMDGYIDAEELAEIFRASGEHVTDEEIESIMKDGDKNNDGRIDFDEFLKMM 155
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: TNNC2_CHICK (Troponin C, skeletal muscle OS=Gallus gallus GN=TNNC2 PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.186e-24 Identity = 52/109 (47.71%), Postives = 81/109 (74.31%), Query Frame = -1 Query: 340 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 657 GQNPT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL FR+FDK+ +GFI EL ++ GE +T+E+++++++++D + DG+I+++EF+K+M Sbjct: 51 GQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 159
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CATR_CHLRE (Caltractin OS=Chlamydomonas reinhardtii PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.186e-24 Identity = 53/106 (50.00%), Postives = 76/106 (71.70%), Query Frame = -1 Query: 340 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 657 G P + E++ MI+E+D DG+GTIDF EFL +M KM + DS EE+ +AFR+FD D +G I+ +LR V LGE LT+EE+ EMI EAD + D +I+ +EF+++M Sbjct: 58 GFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIM 163
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CETN1_MOUSE (Centrin-1 OS=Mus musculus GN=Cetn1 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.549e-24 Identity = 54/106 (50.94%), Postives = 75/106 (70.75%), Query Frame = -1 Query: 340 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 657 G P + E++ MI+EVD + G I F +FL +M +KM + D++EE+ +AFR+FD D+ G IS L+ V LGE LTDEE+ EMI EAD DGDG++N EEF+K+M Sbjct: 61 GFEPRKEEMKKMISEVDKEATGKISFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGESLTDEELQEMIDEADRDGDGEVNEEEFLKIM 166
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: TNNC2_MOUSE (Troponin C, skeletal muscle OS=Mus musculus GN=Tnnc2 PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.450e-24 Identity = 52/109 (47.71%), Postives = 79/109 (72.48%), Query Frame = -1 Query: 340 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 657 GQ PT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD++ +G+I A EL + GE +T+EE++ ++++ D + DG+I+++EF+K+M Sbjct: 48 GQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTEEEIESLMKDGDKNNDGRIDFDEFLKMM 156
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CETN2_MOUSE (Centrin-2 OS=Mus musculus GN=Cetn2 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.450e-24 Identity = 50/106 (47.17%), Postives = 77/106 (72.64%), Query Frame = -1 Query: 340 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 657 G P + E++ MI+E+D +G G ++F +FL +M +KM + D++EE+ +AF++FD D+ G IS L+ V LGE LTDEE+ EMI EAD DGDG++N +EF+++M Sbjct: 61 GFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIM 166
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: TNNC2_HUMAN (Troponin C, skeletal muscle OS=Homo sapiens GN=TNNC2 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 4.505e-24 Identity = 52/109 (47.71%), Postives = 78/109 (71.56%), Query Frame = -1 Query: 340 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 657 GQ PT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD++ +G+I EL + GE +TDEE++ ++++ D + DG+I+++EF+K+M Sbjct: 48 GQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDPEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 156
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: TNNC2_ANGAN (Troponin C, skeletal muscle OS=Anguilla anguilla PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.505e-24 Identity = 53/109 (48.62%), Postives = 79/109 (72.48%), Query Frame = -1 Query: 340 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 657 GQNPT EL +I EVD DG+GTIDF EFL +M R++K+ SEEEL E FRVFDK+ +GFI E ++ + GE +++EE+DE++ + D + DG+I+++E++K+M Sbjct: 48 GQNPTREELDAIIEEVDEDGSGTIDFEEFLVMMVRQLKEDQAGKSEEELAEFFRVFDKNGDGFIDREEFGEILRSSGEPVSEEEIDELMADGDKNNDGKIDFDEWLKMM 156
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: TNNC1_COTJA (Troponin C, slow skeletal and cardiac muscles OS=Coturnix coturnix japonica GN=TNNC1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.505e-24 Identity = 50/109 (45.87%), Postives = 82/109 (75.23%), Query Frame = -1 Query: 340 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 657 GQNPT ELQ+MI+EVD DG+GT+DF +FL +M R MKD +EEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ + + DG+I+Y+EF++ M Sbjct: 49 GQNPTPEELQEMIDEVDEDGSGTVDFDQFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGNKNNDGRIDYDEFLQFM 157
BLAST of CF835305 vs. ExPASy Swiss-Prot
Match: CATR_DUNSA (Caltractin OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.884e-24 Identity = 53/106 (50.00%), Postives = 73/106 (68.87%), Query Frame = -1 Query: 340 GQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 657 G P + E++ MI ++D G+GTIDF EFL +M KM + DS EE+ +AF++FD D GFI+ L+ V LGE LTDEE+ EM EAD +GDGQI+ +EF ++M Sbjct: 58 GFEPKKEEIKKMIADIDKAGSGTIDFEEFLQMMTSKMGERDSREEIIKAFKLFDDDNTGFITLKNLKRVAKELGENLTDEELQEMTDEADRNGDGQIDEDEFYRIM 163 The following BLAST results are available for this feature:
BLAST of CF835305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 390
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835305 ID=CF835305; Name=CF835305; organism=Citrus sinensis; type=EST; length=657bpback to top |