CF835306

Overview
NameCF835306
Unique NameCF835306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML8_ARATH (Calmodulin-like protein 8 OS=Arabidopsis thaliana GN=CML8 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.668e-48
Identity = 88/123 (71.54%), Postives = 112/123 (91.06%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 385
            +GCIT +EL TV+RSL QNPTE EL D+I E+D+D  GTI+F EFLNLMA+K++++D+EEELKEAF+VFDKDQNG+ISA+EL HVM NLGEKLTDEEV++MI+EAD+DGDGQ+NY+EFVK+M+
Sbjct:   26 DGCITVEELATVIRSLDQNPTEQELHDIITEIDSDSNGTIEFAEFLNLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYDEFVKMMI 148          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CALM_SCHPO (Calmodulin OS=Schizosaccharomyces pombe GN=cam1 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.009e-47
Identity = 91/130 (70.00%), Postives = 110/130 (84.62%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            F R  +G IT+ ELG V+RSLGQ+PT AELQDMINEVDADG GTIDF EFL +MARKMKDTD+EEE++EAF+VFDKD NG+I+  EL HV+T+LGE+L+ EEV +MIREAD DGDG INYEEF +V+ +K
Sbjct:   21 FDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVISSK 150          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML2_ORYSJ (Putative calmodulin-like protein 2 OS=Oryza sativa subsp. japonica GN=CML2 PE=3 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 1.726e-45
Identity = 85/125 (68.00%), Postives = 110/125 (88.00%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            +G IT+KELGTV+ SLGQ+PTEAEL+ M+ EVDADG+G+I+F EFL L+ARK++DT +E++++EAFRVFDKDQNGFI+  ELRHVM NLG+ L+D+E+ +M+ EAD DGDGQINY EF+KVMMAK
Sbjct:   24 DGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFLGLLARKLRDTGAEDDIREAFRVFDKDQNGFITPDELRHVMANLGDPLSDDELADMLHEADSDGDGQINYNEFLKVMMAK 148          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML4_ORYSJ (Calmodulin-like protein 4 OS=Oryza sativa subsp. japonica GN=CML4 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.119e-44
Identity = 87/122 (71.31%), Postives = 100/122 (81.97%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            +GCIT +EL  V RSLG  PT+ EL DM+ EVD DG G IDF EFL+L+ARKMKD D +EELKEAF V DKDQNGFIS  ELR VMTNLGEK+TDEEV++MIREAD DGDGQ+NY+EFV +M
Sbjct:   24 DGCITLEELAAVTRSLGLEPTDQELNDMMREVDTDGNGIIDFQEFLSLIARKMKDGDGDEELKEAFEVLDKDQNGFISPTELRTVMTNLGEKMTDEEVEQMIREADTDGDGQVNYDEFVIMM 145          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML3_ORYSJ (Calmodulin-like protein 3 OS=Oryza sativa subsp. japonica GN=CML3 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.909e-44
Identity = 83/125 (66.40%), Postives = 109/125 (87.20%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            +G IT+KELGTV+ SLGQ+PTEAEL+ M+ EVDADG+G+I+F EFL L+ARK++DT +E+++++AFRVFDKDQNGFI+  ELRHVM NL + L+D+E+ +M+ EAD DGDGQINY EF+KVMMAK
Sbjct:   24 DGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFLGLLARKLRDTGAEDDIRDAFRVFDKDQNGFITPDELRHVMANLSDPLSDDELADMLHEADSDGDGQINYNEFLKVMMAK 148          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CALM_CANAL (Calmodulin OS=Candida albicans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.756e-43
Identity = 83/130 (63.85%), Postives = 110/130 (84.62%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            F +  +G ITTKELGTV+RSLGQNP+E+EL DMINEVD +  G+IDFPEFL +MARKMKDTDSE E+ EAF+VFD++ +G ISAAELRH++T++GEKL+D +VD+MI+EAD + DG+I+ +EF  ++ AK
Sbjct:   20 FDKDSDGKITTKELGTVMRSLGQNPSESELTDMINEVDVNSDGSIDFPEFLTMMARKMKDTDSEAEIAEAFKVFDRNGDGKISAAELRHLLTSIGEKLSDADVDQMIKEADTNNDGEIDIQEFTSLLAAK 149          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML5_ORYSJ (Calmodulin-like protein 5 OS=Oryza sativa subsp. japonica GN=CML5 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.512e-41
Identity = 85/135 (62.96%), Postives = 105/135 (77.78%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMK------------DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 385
            +GCIT +EL TV+RSLGQ PT  EL +MI +VD DG GTI+F EFL LMARK                 ++EEL+EAF+VFDKDQ+G ISAAELRHVM +LGEKLTDEEV++MIREAD+DGDGQ+N++EFV++MM
Sbjct:   28 DGCITLEELDTVVRSLGQTPTREELAEMIRDVDVDGNGTIEFAEFLALMARKASRGGENGGGGDDSGDAADEELREAFKVFDKDQDGLISAAELRHVMISLGEKLTDEEVEQMIREADLDGDGQVNFDEFVRMMM 162          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CALL_DROME (Calmodulin-related protein 97A OS=Drosophila melanogaster GN=And PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.512e-41
Identity = 79/124 (63.71%), Postives = 104/124 (83.87%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            G I T+ELGT++R+LGQNPTEAELQD+I E + +  G ++F EF  +MA++M++TD+EEE++EAF++FD+D +GFIS AELR VM NLGEK+TDEE+DEMIREAD DGDG INYEEFV ++  K
Sbjct:   25 GKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQK 148          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CABO_LOLPE (Squidulin OS=Loligo pealeii PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.725e-40
Identity = 79/126 (62.70%), Postives = 103/126 (81.75%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            +G IT+KEL +V++SLG+ P++AEL++MI EVD DG GTI++ EF+ +MA++M  TD E+E++EAFRVFDKD NG I+AAELR VM N   EKLT EE+ EMIREAD+DGDG +NYEEFVK+M  K
Sbjct:   24 DGQITSKELRSVMKSLGRTPSDAELEEMIREVDTDGNGTIEYAEFVEMMAKQMGPTDPEKEMREAFRVFDKDGNGLITAAELRQVMANFSDEKLTSEEISEMIREADIDGDGMVNYEEFVKMMTPK 149          

HSP 2 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 2
Query:  197 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK*VTP 403
            E+K+AF +FD D +G I++ ELR VM +LG   +D E++EMIRE D DG+G I Y EFV+ MMAK + P
Sbjct:   11 EIKDAFDMFDIDGDGQITSKELRSVMKSLGRTPSDAELEEMIREVDTDGNGTIEYAEFVE-MMAKQMGP 78          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CALL_CAEEL (Calmodulin-like protein OS=Caenorhabditis elegans GN=cal-1 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.176e-39
Identity = 78/121 (64.46%), Postives = 98/121 (80.99%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G I+TKELG  +RSLGQNPTE E+ +MINEVD DG G I+FPEF  +M R MK+TDSE  ++EAFRVFDKD NG I+A E R+ M ++G + ++EEVDEMI+E DVDGDG+I+YEEFVK+M
Sbjct:   39 GTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMKRMMKETDSEM-IREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVKMM 158          

HSP 2 Score: 68.1662 bits (165), Expect = 4.745e-11
Identity = 32/63 (50.79%), Postives = 44/63 (69.84%), Query Frame = 2
Query:  194 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            +E +EAF +FDKD NG IS  EL   M +LG+  T++E+ EMI E D+DG+GQI + EF  +M
Sbjct:   24 DEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMM 86          
The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420
Match NameE-valueIdentityDescription
CML8_ARATH1.668e-4871.54Calmodulin-like protein 8 OS=Arabidopsis thaliana ... [more]
CALM_SCHPO7.009e-4770.00Calmodulin OS=Schizosaccharomyces pombe GN=cam1 PE... [more]
CML2_ORYSJ1.726e-4568.00Putative calmodulin-like protein 2 OS=Oryza sativa... [more]
CML4_ORYSJ1.119e-4471.31Calmodulin-like protein 4 OS=Oryza sativa subsp. j... [more]
CML3_ORYSJ1.909e-4466.40Calmodulin-like protein 3 OS=Oryza sativa subsp. j... [more]
CALM_CANAL2.756e-4363.85Calmodulin OS=Candida albicans GN=CMD1 PE=3 SV=2[more]
CML5_ORYSJ1.512e-4162.96Calmodulin-like protein 5 OS=Oryza sativa subsp. j... [more]
CALL_DROME1.512e-4163.71Calmodulin-related protein 97A OS=Drosophila melan... [more]
CABO_LOLPE3.725e-4062.70Squidulin OS=Loligo pealeii PE=1 SV=1[more]
CALL_CAEEL9.176e-3964.46Calmodulin-like protein OS=Caenorhabditis elegans ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bp
GTTCTATAGGCCTTTAGAAGGTTGCATTACCACCAAGGAGCTTGGCACTG
TCCTGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATG
ATCAATGAAGTGGATGCTGATGGTACTGGAACTATTGATTTTCCTGAATT
CCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGC
TGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCA
GCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGGGAGAAGCTTACTGA
TGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGATGGTGATGGCC
AGATAAATTACGAGGAATTTGTCAAGGTTATGATGGCTAAGTAAGTGACT
CCACCCAACCAAAACTTCCTGGGAAAAGAAGAAATTGGTTGATTAATATA
ATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGATAACTCTGAG
GTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTGTCTTGTGACT
GGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCCGCTCTTCTGT
GAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCCCTATTTCTTA
TTTCGAGATTTTGTGGATAAGAAATTGATATGTGAT
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