CF835306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML10_ARATH (Calmodulin-like protein 10 OS=Arabidopsis thaliana GN=CML10 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.465e-36 Identity = 80/125 (64.00%), Postives = 99/125 (79.20%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391 +G ITT+E G V+RSLG N T+AELQ+ IN+ D DG GTI+F EFL MA KDT SE++LK+ FR+FD D+NGFISAAE+R+V T L K TDEE+DE+I+ ADVDGDGQINY EF ++MMAK Sbjct: 25 DGHITTEEFGAVMRSLGLNLTQAELQEEINDSDLDGDGTINFTEFLCAMA---KDTYSEKDLKKDFRLFDIDKNGFISAAEMRYVRTILRWKQTDEEIDEIIKAADVDGDGQINYREFARLMMAK 146
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CALM_YEAST (Calmodulin OS=Saccharomyces cerevisiae GN=CMD1 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.371e-34 Identity = 70/127 (55.12%), Postives = 99/127 (77.95%), Query Frame = 2 Query: 2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 F + G I++ EL TV+RSLG +P+EAE+ D++NE+D DG I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD EVD+M+RE DG G+IN ++F ++ Sbjct: 20 FDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALL 145
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CALM_KLULA (Calmodulin OS=Kluyveromyces lactis GN=CMD1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.339e-34 Identity = 71/127 (55.91%), Postives = 98/127 (77.17%), Query Frame = 2 Query: 2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 F + G I+ EL TV+RSLG +P+EAE+ D++NE+D DG I+F EFL LM+R++K DSE+EL EAF+VFDK+ +G ISAAEL+HV+T++GEKLTD EVDEM+RE DG G+IN ++F ++ Sbjct: 20 FDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML6_ORYSJ (Putative calmodulin-like protein 6 OS=Oryza sativa subsp. japonica GN=CML6 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.989e-34 Identity = 69/127 (54.33%), Postives = 97/127 (76.38%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDS---EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388 +GCI+ +EL TVL LG P++ +LQDMI VD DG GTI+F EFL +M +K+ + D EEEL++AFR+FDKD NGFIS EL VM +LGE++T++E+D+M++ AD + DGQ++YEEF +VMM+ Sbjct: 25 DGCISREELATVLTRLGMAPSQEDLQDMIVAVDEDGNGTIEFDEFLAIMKKKLYENDKGDDEEELRKAFRIFDKDDNGFISRNELSMVMASLGEEMTEDEIDDMMKAADSNNDGQVDYEEFKRVMMS 151
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CALM_STRPU (Calmodulin (Fragment) OS=Strongylocentrotus purpuratus PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.516e-33 Identity = 68/80 (85.00%), Postives = 76/80 (95.00%), Query Frame = 2 Query: 152 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391 L +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K Sbjct: 1 LTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 80
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC1_PIG (Troponin C, slow skeletal and cardiac muscles OS=Sus scrofa GN=TNNC1 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.859e-32 Identity = 64/125 (51.20%), Postives = 96/125 (76.80%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +GCI+TKELG V+R LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC1_MOUSE (Troponin C, slow skeletal and cardiac muscles OS=Mus musculus GN=Tnnc1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.859e-32 Identity = 64/125 (51.20%), Postives = 96/125 (76.80%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +GCI+TKELG V+R LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC1_BOVIN (Troponin C, slow skeletal and cardiac muscles OS=Bos taurus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.859e-32 Identity = 64/125 (51.20%), Postives = 96/125 (76.80%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +GCI+TKELG V+R LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC1_RABIT (Troponin C, slow skeletal and cardiac muscles OS=Oryctolagus cuniculus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.734e-32 Identity = 64/125 (51.20%), Postives = 96/125 (76.80%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +GCI+TKELG V+R LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC1_HUMAN (Troponin C, slow skeletal and cardiac muscles OS=Homo sapiens GN=TNNC1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.734e-32 Identity = 64/125 (51.20%), Postives = 96/125 (76.80%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +GCI+TKELG V+R LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD SEEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157 The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bpback to top |