CF835306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC2_RANES (Troponin C, skeletal muscle OS=Rana esculenta PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 65/124 (52.42%), Postives = 95/124 (76.61%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G I+TKELGTV+R LGQ PT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FDK+ +G+I + EL ++ + GE +TDEE++E++++ D + DG+I+++EF+K+M Sbjct: 35 GDISTKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAQGKSEEELAECFRIFDKNADGYIDSEELGEILRSSGESITDEEIEELMKDGDKNNDGKIDFDEFLKMM 158
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC1_CHICK (Troponin C, slow skeletal and cardiac muscles OS=Gallus gallus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32 Identity = 63/125 (50.40%), Postives = 96/125 (76.80%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +GCI+TKELG V+R LGQNPT ELQ+MI+EVD DG+GT+DF EFL +M R MKD +EEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ D + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC2_MELGA (Troponin C, skeletal muscle OS=Meleagris gallopavo GN=TNNC2 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 5.392e-31 Identity = 64/124 (51.61%), Postives = 94/124 (75.81%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G I+TKELGTV+R LGQNPT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL FR+FDK+ +GFI EL ++ GE +T+EE++++++++D + DG+I+++EF+K+M Sbjct: 35 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEEIEDLMKDSDKNNDGRIDFDEFLKMM 158
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC1_COTJA (Troponin C, slow skeletal and cardiac muscles OS=Coturnix coturnix japonica GN=TNNC1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.392e-31 Identity = 61/125 (48.80%), Postives = 96/125 (76.80%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTD---SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +GCI+TKELG V+R LGQNPT ELQ+MI+EVD DG+GT+DF +FL +M R MKD +EEEL + FR+FDK+ +G+I EL+ ++ GE +T+++++E++++ + + DG+I+Y+EF++ M Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDQFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGNKNNDGRIDYDEFLQFM 157
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC2_CHICK (Troponin C, skeletal muscle OS=Gallus gallus GN=TNNC2 PE=1 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.201e-30 Identity = 63/124 (50.81%), Postives = 94/124 (75.81%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G I+TKELGTV+R LGQNPT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL FR+FDK+ +GFI EL ++ GE +T+E+++++++++D + DG+I+++EF+K+M Sbjct: 36 GDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 159
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CATR_SPESI (Caltractin (Fragment) OS=Spermatozopsis similis PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.569e-30 Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G I KEL + +LG P + E+Q MI+++D DG+GTIDF EFL +M KM + DS EE+ +AFR+FD DQ G I+ L+ V LGE LTDEE+ EMI EAD DGDG+IN EEF ++M Sbjct: 22 GTIDAKELKVXMXALGFEPKKEEIQKMISDIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDQTGKITFKNLKRVAKELGENLTDEEIQEMIDEADRDGDGEINEEEFFRIM 142
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML12_ARATH (Calmodulin-like protein 12 OS=Arabidopsis thaliana GN=CML12 PE=1 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 2.676e-30 Identity = 76/142 (53.52%), Postives = 92/142 (64.79%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMA---------RKMKDT--------DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391 +G IT KEL TV+ SLG+N T+A+LQDM+NEVD DG GTIDFPEFL LMA R K T D E +EAFRVFDK+ +G+I+ ELR M +LGE T E+ +MI EAD DGDG I++ EFV VM K Sbjct: 114 DGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEFLYLMAKNQGHDQAPRHTKKTMVDYQLTDDQILEFREAFRVFDKNGDGYITVNELRTTMRSLGETQTKAELQDMINEADADGDGTISFSEFVCVMTGK 255 HSP 2 Score: 123.25 bits (308), Expect = 1.243e-27 Identity = 64/138 (46.38%), Postives = 93/138 (67.39%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKM---------------KDTDSE-EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +G IT KELGT++RS+G+ PT+A+LQD++NE D DG GTIDFPEFL +MA+ K TD + E +E+FR+FDK+ +G I+ ELR VM +LG+ T ++ +M+ E D+DGDG I++ EF+ +M Sbjct: 25 DGSITKKELGTMMRSIGEKPTKADLQDLMNEADLDGDGTIDFPEFLCVMAKNQGHDQAPRHTKKTMADKLTDDQITEYRESFRLFDKNGDGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGDGTIDFPEFLYLM 162 HSP 3 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQ 235 +G IT EL T +RSLG+ T+AELQDMINE DADG GTI F EF+ +M KM DT S+ KE +RV ++ Q Sbjct: 204 DGYITVNELRTTMRSLGETQTKAELQDMINEADADGDGTISFSEFVCVMTGKMIDTQSK---KETYRVVNQGQ 273
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CALML_DICDI (Calmodulin-like protein OS=Dictyostelium discoideum GN=calB PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.676e-30 Identity = 64/127 (50.39%), Postives = 96/127 (75.59%), Query Frame = 2 Query: 2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 F + +G IT +ELG V+RS+G NPT+ EL+D+ E+D DG+G +DF +F +LM RKMK +DSE ++K+AF+VFDK NG+ + +L+H +T++GEKLT EE D M+++A DGQI+ +EFV+V+ Sbjct: 18 FDKDKDGKITIQELGIVMRSVGSNPTQQELKDIAKEID-DGSGLVDFSKFSSLMTRKMKYSDSEADIKQAFKVFDKKGNGYANIQDLKHTLTSIGEKLTKEEFDNMLKDAKT-VDGQIHVDEFVRVI 142
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC2_RABIT (Troponin C, skeletal muscle OS=Oryctolagus cuniculus GN=TNNC2 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30 Identity = 63/124 (50.81%), Postives = 91/124 (73.39%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G I+ KELGTV+R LGQ PT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD++ +G+I A EL + GE +TDEE++ ++++ D + DG+I+++EF+K+M Sbjct: 33 GDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMM 156
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC2_PIG (Troponin C, skeletal muscle OS=Sus scrofa GN=TNNC2 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.564e-30 Identity = 63/124 (50.81%), Postives = 91/124 (73.39%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDT---DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G I+ KELGTV+R LGQ PT+ EL +I EVD DG+GTIDF EFL +M R+MK+ SEEEL E FR+FD++ +G+I A EL + GE +TDEE++ ++++ D + DG+I+++EF+K+M Sbjct: 32 GDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNMDGYIDAEELAEIFRASGEHVTDEEIESIMKDGDKNNDGRIDFDEFLKMM 155 The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bpback to top |