CF835306

Overview
NameCF835306
Unique NameCF835306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CETN1_BOVIN (Centrin-1 OS=Bos taurus GN=CETN1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.287e-28
Identity = 60/121 (49.59%), Postives = 85/121 (70.25%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G I  KEL   +R+LG  P + E++ MI +VD +GTG I F +FL +M +KM + D++EE+ +AFR+FD D+ G IS   L+ V   LGE LTDEE+ EMI EAD DGDG++N +EF+++M
Sbjct:   46 GTIDVKELKVAMRALGFEPRKEEMKRMIADVDKEGTGKISFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEDEFLRIM 166          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CETN2_HUMAN (Centrin-2 OS=Homo sapiens GN=CETN2 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.517e-28
Identity = 57/121 (47.11%), Postives = 87/121 (71.90%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G I  KEL   +R+LG  P + E++ MI+E+D +GTG ++F +FL +M +KM + D++EE+ +AF++FD D+ G IS   L+ V   LGE LTDEE+ EMI EAD DGDG+++ +EF+++M
Sbjct:   46 GTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 166          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CATR_DUNSA (Caltractin OS=Dunaliella salina PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.243e-27
Identity = 60/121 (49.59%), Postives = 82/121 (67.77%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G I  KEL   +R+LG  P + E++ MI ++D  G+GTIDF EFL +M  KM + DS EE+ +AF++FD D  GFI+   L+ V   LGE LTDEE+ EM  EAD +GDGQI+ +EF ++M
Sbjct:   43 GTIDAKELKVAMRALGFEPKKEEIKKMIADIDKAGSGTIDFEEFLQMMTSKMGERDSREEIIKAFKLFDDDNTGFITLKNLKRVAKELGENLTDEELQEMTDEADRNGDGQIDEDEFYRIM 163          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC_TACTR (Troponin C OS=Tachypleus tridentatus PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.623e-27
Identity = 59/130 (45.38%), Postives = 93/130 (71.54%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSE---EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            F R  +G I T  + T+LR+LGQ   E +L+D+I E+D DG+G ++F EF+ L AR + + D+E   EEL+EAFR++DK   GFI+ ++LR ++  L +KLT++E+DEMI E D DG G ++++EF+++M
Sbjct:   22 FDRDKKGVIHTNMVSTILRTLGQTFEEKDLKDLIAEIDQDGSGELEFEEFMALAARFLVEEDAEAMQEELREAFRLYDKQGQGFINVSDLRDILRALDDKLTEDELDEMIAEIDTDGSGTVDFDEFMEMM 151          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML8_ORYSJ (Probable calcium-binding protein CML8 OS=Oryza sativa subsp. japonica GN=CML8 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.062e-26
Identity = 57/121 (47.11%), Postives = 82/121 (67.77%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G I  KEL   +R+LG   T  ++  MI EVD DG+GTIDF EF+++M  KM + D+ EEL +AF++ DKD NG IS  +++ +    GE  T +EV EMI  AD +GDG++++EEF+K+M
Sbjct:   61 GTIDPKELNVAMRALGFEMTPEQIHQMIAEVDKDGSGTIDFDEFVHMMTDKMGERDAREELNKAFKIIDKDNNGKISDVDIQRLAIETGEPFTLDEVREMIEAADENGDGEVDHEEFLKMM 181          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML13_ORYSJ (Probable calcium-binding protein CML13 OS=Oryza sativa subsp. japonica GN=CML13 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.062e-26
Identity = 53/121 (43.80%), Postives = 86/121 (71.07%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G I  KEL   +R+LG   TE ++  MI +VD DG+G+ID+ EF ++M  K+ + DS+EEL +AF + D+D+NG IS  +++ +   LGE  T +E+ EM++EAD +GDG+I+++EF+++M
Sbjct:   42 GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGSIDYEEFEHMMTAKIGERDSKEELTKAFSIIDQDKNGKISDVDIQRIAKELGENFTYQEIQEMVQEADRNGDGEIDFDEFIRMM 162          

HSP 2 Score: 68.5514 bits (166), Expect = 3.633e-11
Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = 2
Query:  194 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            +E+KEAF +FD D +G I A EL   M  LG ++T+E++++MI + D DG G I+YEEF  +M AK
Sbjct:   27 QEIKEAFDLFDTDNSGTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGSIDYEEFEHMMTAK 92          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML20_ARATH (Probable calcium-binding protein CML20 OS=Arabidopsis thaliana GN=CML20 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.222e-26
Identity = 54/121 (44.63%), Postives = 84/121 (69.42%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G I  KEL   +R+LG   TE ++  MI +VD DG+G IDF EF+++M  K+ + D++EEL +AF++ D D+NG IS  +++ +  +LGE  TD E+ EM+ EAD D DG++N +EF+++M
Sbjct:   41 GTIDAKELNVAMRALGFEMTEEQINKMIADVDKDGSGAIDFDEFVHMMTAKIGERDTKEELTKAFQIIDLDKNGKISPDDIKRMAKDLGENFTDAEIREMVEEADRDRDGEVNMDEFMRMM 161          

HSP 2 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 2
Query:  182 TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            T  ++E+KEAF +FD D +G I A EL   M  LG ++T+E++++MI + D DG G I+++EFV +M AK
Sbjct:   22 TQKKQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQINKMIADVDKDGSGAIDFDEFVHMMTAK 91          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML14_ARATH (Probable calcium-binding protein CML14 OS=Arabidopsis thaliana GN=CML14 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.821e-26
Identity = 56/125 (44.80%), Postives = 86/125 (68.80%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            +G I   ELG ++RSLG NPTE++L+ +I   +   +   DF  FL+LMA+ +K    + +L++AF+V DK+  GF++ A+LRH++T++GEKL   E DE I+E DV  DG+I YE+F+  M+AK
Sbjct:   26 DGKIAPSELGILMRSLGGNPTESQLKSIITTENL--SSPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLQPSEFDEWIKEVDVGSDGKIRYEDFIARMVAK 148          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CATR_ATRNU (Caltractin OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.821e-26
Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G I  KEL   +R+LG   TE ++  MI +VD DG+G IDF EF ++M  K+ + D++EEL +AFR+ D+D NG IS  +++ +   LGE  T +++ +MI EAD D DG++N EEF+++M
Sbjct:   40 GTIDAKELNVAMRALGFEMTEEQINQMIADVDKDGSGAIDFDEFCHMMTAKIGERDTKEELMKAFRIIDQDNNGKISPEDIQRIAKELGENFTVKDIQDMIEEADRDRDGEVNVEEFLRMM 160          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML7_ORYSJ (Probable calcium-binding protein CML7 OS=Oryza sativa subsp. japonica GN=CML7 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.908e-26
Identity = 58/125 (46.40%), Postives = 84/125 (67.20%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            +G I   ELG ++RSLG NPT+A+L+D+  +     T   DFP FL+LM   ++    +  L++AFRV DKD +G +S A+LRHV+T++GEKL   E DE IRE DV  DG I Y++F++ ++AK
Sbjct:   26 DGRIAPSELGVLMRSLGGNPTQAQLRDIAAQEKL--TAPFDFPRFLDLMRAHLRPEPFDRPLRDAFRVLDKDASGTVSVADLRHVLTSIGEKLEPHEFDEWIREVDVAPDGTIRYDDFIRRIVAK 148          
The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420
Match NameE-valueIdentityDescription
CETN1_BOVIN7.287e-2849.59Centrin-1 OS=Bos taurus GN=CETN1 PE=2 SV=1[more]
CETN2_HUMAN9.517e-2847.11Centrin-2 OS=Homo sapiens GN=CETN2 PE=1 SV=1[more]
CATR_DUNSA1.243e-2749.59Caltractin OS=Dunaliella salina PE=2 SV=1[more]
TNNC_TACTR1.623e-2745.38Troponin C OS=Tachypleus tridentatus PE=1 SV=1[more]
CML8_ORYSJ3.062e-2647.11Probable calcium-binding protein CML8 OS=Oryza sat... [more]
CML13_ORYSJ3.062e-2643.80Probable calcium-binding protein CML13 OS=Oryza sa... [more]
CML20_ARATH5.222e-2644.63Probable calcium-binding protein CML20 OS=Arabidop... [more]
CML14_ARATH6.821e-2644.80Probable calcium-binding protein CML14 OS=Arabidop... [more]
CATR_ATRNU6.821e-2644.63Caltractin OS=Atriplex nummularia PE=2 SV=1[more]
CML7_ORYSJ8.908e-2646.40Probable calcium-binding protein CML7 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bp
GTTCTATAGGCCTTTAGAAGGTTGCATTACCACCAAGGAGCTTGGCACTG
TCCTGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATG
ATCAATGAAGTGGATGCTGATGGTACTGGAACTATTGATTTTCCTGAATT
CCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGC
TGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCA
GCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGGGAGAAGCTTACTGA
TGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGATGGTGATGGCC
AGATAAATTACGAGGAATTTGTCAAGGTTATGATGGCTAAGTAAGTGACT
CCACCCAACCAAAACTTCCTGGGAAAAGAAGAAATTGGTTGATTAATATA
ATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGATAACTCTGAG
GTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTGTCTTGTGACT
GGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCCGCTCTTCTGT
GAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCCCTATTTCTTA
TTTCGAGATTTTGTGGATAAGAAATTGATATGTGAT
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