CF835306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML13_ARATH (Probable calcium-binding protein CML13 OS=Arabidopsis thaliana GN=CML13 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.908e-26 Identity = 56/125 (44.80%), Postives = 86/125 (68.80%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391 +G I ELG ++RSLG NPT+A+L+ +I + + DF FL+LMA+ +K + +L++AF+V DK+ GF++ A+LRH++T++GEKL E DE I+E DV DG+I YE+F+ M+AK Sbjct: 26 DGKIAPSELGILMRSLGGNPTQAQLKSIIASENL--SSPFDFNRFLDLMAKHLKTEPFDRQLRDAFKVLDKEGTGFVAVADLRHILTSIGEKLEPNEFDEWIKEVDVGSDGKIRYEDFIARMVAK 148
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML9_ARATH (Calmodulin-like protein 9 OS=Arabidopsis thaliana GN=CML9 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.519e-25 Identity = 56/124 (45.16%), Postives = 85/124 (68.55%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388 +G IT ++L V++S+G+NP +LQ M+++VD G G I F +FL +MA+ + +EL E FRVFD+D +G IS EL M ++G K+T EE + M+READ+DGDG +++ EF K+M+A Sbjct: 25 DGFITKEKLTKVMKSMGKNPKAEQLQQMMSDVDIFGNGGITFDDFLYIMAQNTSQESASDELIEVFRVFDRDGDGLISQLELGEGMKDMGMKITAEEAEHMVREADLDGDGFLSFHEFSKMMIA 148
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CATR_NAEGR (Caltractin OS=Naegleria gruberi GN=CTN PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.519e-25 Identity = 58/121 (47.93%), Postives = 84/121 (69.42%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G I KEL +R+LG P + E++ MI+ +D +G+G IDF +FL LM KM + DS E+ +AFR+FD+D +GFI+ A L+ V +LGE +TDEE+ EMI EAD GQI+ E+F+++M Sbjct: 47 GKIDAKELKVAMRALGFEPKKEEIKKMISGID-NGSGKIDFNDFLQLMTAKMSEKDSHAEIMKAFRLFDEDDSGFITFANLKRVAKDLGENMTDEELREMIEEADRSNQGQISKEDFLRIM 166
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CALL5_HUMAN (Calmodulin-like protein 5 OS=Homo sapiens GN=CALML5 PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.592e-25 Identity = 60/121 (49.59%), Postives = 84/121 (69.42%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G I +ELG L++ G+N +EA+L+ +I+EVD+DG G I F EFL A+K + E+L+ AFR FD+D +G I+ ELR M LG+ L EE+D MIREADVD DG++NYEEF +++ Sbjct: 26 GTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGEISFQEFLTA-AKKARA--GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARML 143
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC_HALRO (Troponin C, body wall muscle OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.385e-25 Identity = 62/129 (48.06%), Postives = 86/129 (66.67%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTD-------SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +G I++KELG V++ LGQNPTE +LQ+MI EVD DG+GTIDF EF +M R+M+ + E+EL EAFR+FD D +G EL+ + GE + EVDEM+ + D + D QI+YEE+V +M Sbjct: 25 DGTISSKELGKVMKMLGQNPTEKDLQEMIEEVDIDGSGTIDFEEFCLMMYRQMQAQEEAKIPEREEKELSEAFRLFDLDGDGI--GDELKAALDGTGENVETWEVDEMMADGDKNHDSQIDYEEWVTMM 151
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC1_DROME (Troponin C, isoform 1 OS=Drosophila melanogaster GN=TpnC41C PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25 Identity = 57/124 (45.97%), Postives = 84/124 (67.74%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G I T +GT+L LG +A L D+I EVD DG+G I+F EF L AR + + D+E ELKEAFR++DK+ NG+I+ LR ++ L +KLT++++D MI E D DG G ++++EF++VM Sbjct: 26 GYINTAMVGTILSMLGHQLDDATLADIIAEVDEDGSGQIEFEEFTTLAARFLVEEDAEAMMAELKEAFRLYDKEGNGYITTGVLREILRELDDKLTNDDLDMMIEEIDSDGSGTVDFDEFMEVM 149
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML11_ORYSJ (Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica GN=CML11 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25 Identity = 58/132 (43.94%), Postives = 87/132 (65.91%), Query Frame = 2 Query: 2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKM---KDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388 F R +G +T ELG++LRSLG P+ EL +I D + G I+F EF+ L+A ++ + SE++++ F +FD+D NGFI+AAEL H M LG LT +E+ MI+EAD DGDG+I+++EF + + A Sbjct: 72 FDRNGDGSLTQLELGSLLRSLGLKPSTDELDSLIQRADTNSNGLIEFSEFVALVAPELLYDRAPYSEDQIRRLFNIFDRDGNGFITAAELAHSMAKLGHALTVKELTGMIKEADTDGDGRISFQEFSRAITA 203
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML17_ARATH (Probable calcium-binding protein CML17 OS=Arabidopsis thaliana GN=CML17 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24 Identity = 59/133 (44.36%), Postives = 87/133 (65.41%), Query Frame = 2 Query: 2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKM----KDTD--SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 F R +G +T ELG++LR+LG P+ + + +I++ D G ++FPEF+ L++ ++ K T +EE+L FR+FD D NGFI+AAEL H M LG LT E+ MI+EAD DGDG+IN++EF K + Sbjct: 24 FDRNKDGSLTQLELGSLLRALGVKPSPDQFETLIDKADTKSNGLVEFPEFVALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMAKLGHALTVAELTGMIKEADSDGDGRINFQEFAKAI 156
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC2_CAEEL (Troponin C, isoform 2 OS=Caenorhabditis elegans GN=tnc-2 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.866e-24 Identity = 52/126 (41.27%), Postives = 86/126 (68.25%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFL----NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +G I ++G +LR++GQ E +L+ +I E DADG+G I+F EF N + D EEEL+EAFR++DK+ NG+I+ ++LR ++ L + +++EE+DEMI E D DG G ++++EF+++M Sbjct: 32 KGYIRATQVGQILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEFAAMVANFVVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMM 157
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: TNNC_BRALA (Troponin C OS=Branchiostoma lanceolatum PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.888e-24 Identity = 58/125 (46.40%), Postives = 88/125 (70.40%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSE---EELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G I+TKELGT+++ LG + + ELQ MI+EVD D +GTIDF EFL +MAR M+D++ E +EL+ AFRV DK+ +GFI E R + + G+ LTD+E+ E + + D + DG+ +YEE+ +++ Sbjct: 32 GDISTKELGTIMKRLGMSISREELQQMIDEVDEDASGTIDFEEFLEMMARAMQDSEREIPDDELRAAFRVLDKNGDGFIDKDEFRALASECAGDDLTDDELLEFMMDYDGNRDGRFDYEEWKEII 156 The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bpback to top |