CF835306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MYL4_MOUSE (Myosin light chain 4 OS=Mus musculus GN=Myl4 PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18 Identity = 51/125 (40.80%), Postives = 79/125 (63.20%), Query Frame = 2 Query: 26 ITTKELGTVLRSLGQNPTEAELQDMINEVDAD--GTGTIDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388 IT + G VLR+LGQNPT AE+ ++ + + + T+DF FL ++ + K+ + E+ E RVFDK+ NG + AELRHV+ LGEK+++ EV++++ D +G INYE FVK +M+ Sbjct: 69 ITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMSSKTLDFEMFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMSEAEVEQLL-SGQEDANGCINYEAFVKHIMS 192
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MYL1_HUMAN (Myosin light chain 1/3, skeletal muscle isoform OS=Homo sapiens GN=MYL1 PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18 Identity = 55/133 (41.35%), Postives = 78/133 (58.65%), Query Frame = 2 Query: 2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGT--IDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388 F R + IT ++G VLR+LG NPT AE++ ++ + I+F +FL +M KD + E+ E RVFDK+ NG + AELRHV+ LGEK+ +EEV E + D +G INYE FVK +M+ Sbjct: 62 FDRTGDSKITLSQVGDVLRALGTNPTNAEVRKVLGNPSNEELNAKKIEFEQFLPMMQAISNNKDQATYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEV-EALMAGQEDSNGCINYEAFVKHIMS 193
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML4_ARATH (Calmodulin-like protein 4 OS=Arabidopsis thaliana GN=CML4 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18 Identity = 52/124 (41.94%), Postives = 81/124 (65.32%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +G IT +EL L +LG + +L MI ++DA+G G +D EF +L +++ + E ++++AF VFD+D +GFI+ EL VMT+LG K T E EMI + D DGDG++NY+EF+++M Sbjct: 64 DGRITKEELNDSLENLGIFMPDKDLIQMIQKMDANGDGCVDINEFESLYGSIVEEKE-EGDMRDAFNVFDQDGDGFITVEELNSVMTSLGLKQGKTLECCKEMIMQVDEDGDGRVNYKEFLQMM 186
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKJ_ARATH (Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana GN=CPK19 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.350e-18 Identity = 51/123 (41.46%), Postives = 73/123 (59.35%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMT--NLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G IT EL + L LG TE E++ ++ + D DG GTID+ EF++ + + + E+ L +AF+ FDKD +GFIS EL M N+G+ D + E+I E D D DG INY+EF +M Sbjct: 418 GTITYDELKSGLEKLGSRLTETEVKQLLEDADVDGNGTIDYIEFISATMNRFR-VEREDNLFKAFQHFDKDNSGFISRQELETAMKEYNMGD---DIMIKEIISEVDADNDGSINYQEFCNMM 536
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MYL4_HUMAN (Myosin light chain 4 OS=Homo sapiens GN=MYL4 PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 51/125 (40.80%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 26 ITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGT--IDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388 IT + G VLR+LGQNPT AE+ ++ + + +DF FL ++ + K+ + E+ E RVFDK+ NG + AELRHV+ LGEK+T+ EV++++ + D +G INYE FVK +M+ Sbjct: 73 ITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQE-DANGCINYEAFVKHIMS 196
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MYL1_BOVIN (Myosin light chain 1/3, skeletal muscle isoform OS=Bos taurus GN=MYL1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 55/133 (41.35%), Postives = 78/133 (58.65%), Query Frame = 2 Query: 2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGT--IDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388 F R E IT ++G VLR+LG NPT AE++ ++ + I+F +FL ++ KD + E+ E RVFDK+ NG + AELRHV+ LGEK+ +EEV E + D +G INYE FVK +M+ Sbjct: 60 FDRTGECKITLSQVGDVLRALGTNPTNAEVKKVLGNPSNEEMNAKKIEFEQFLPMLQAISNNKDQGTYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEV-EALMAGQEDSNGCINYEAFVKHIMS 191
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLC1_YEAST (Myosin light chain 1 OS=Saccharomyces cerevisiae GN=MLC1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.069e-18 Identity = 46/126 (36.51%), Postives = 78/126 (61.90%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMIN-EVDADGTGTIDFPEFLNLMARKMKDTDSE-----EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 376 +G I LG LR++G NPT +QD+IN + ++ + L+ K+ D+ E+ +AF+VFDK+ G +S +LR+++T LGEKLTD EVDE+++ +VD +G+I+Y++F++ Sbjct: 19 QGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 144
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLRH_CAEEL (Probable myosin regulatory light chain OS=Caenorhabditis elegans GN=mlc-4 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18 Identity = 47/122 (38.52%), Postives = 76/122 (62.30%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +G I ++L + SLG+ TE + MINE A G I+F FL L K+ TD EE ++ AF+ FD+D +G ++ LR ++T +GE+ ++E+VDE+ R+A + G GQ +Y EF +++ Sbjct: 44 DGFIDQEDLKDMFASLGKEVTEQFIDSMINE--APGAQPINFTMFLTLFGEKLTGTDPEEVIRNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDAPIKG-GQFDYVEFTRML 162
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLR4_SCHPO (Myosin regulatory light chain cdc4 OS=Schizosaccharomyces pombe GN=cdc4 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18 Identity = 52/131 (39.69%), Postives = 79/131 (60.31%), Query Frame = 2 Query: 2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARK--MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388 F R G I +G +LR+ GQNPT AE I E+++ +D +FL ++ R EE + F+VFDKD G I ELR+V+T+LGEKL++EE+DE+++ V DG +NY +FV++++A Sbjct: 15 FDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA 140
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLEX_CHICK (Myosin light chain, embryonic OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18 Identity = 50/125 (40.00%), Postives = 78/125 (62.40%), Query Frame = 2 Query: 26 ITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGT--IDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388 IT + G VLR+LG NPT AE+ ++ + + T +DF FL ++ + ++ + E+ E RVFDK+ NG + AELRHV+ LGEK+T+ EV++++ + D +G INYE FVK +M+ Sbjct: 61 ITYAQCGDVLRALGHNPTNAEVLKVLGKPKPEDLNTKMLDFETFLPILQHFTRNREQGTFEDFVEGLRVFDKEGNGLVMGAELRHVLVTLGEKMTESEVEQLMAGLE-DANGCINYEAFVKHIMS 184 The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bpback to top |