CF835306

Overview
NameCF835306
Unique NameCF835306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CALL4_XENTR (Calmodulin-like protein 4 OS=Xenopus tropicalis GN=calml4 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17
Identity = 48/120 (40.00%), Postives = 67/120 (55.83%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 376
            +G I   +L TV+R LG  PT  E+   +        G +DF  FL +M R+ K  D E E+  A  + DK + G I   ELR  +T +GEKLT EEVD++++   V  DG + YEEFV+
Sbjct:   25 KGKIPAGDLLTVMRCLGTCPTPGEVTRHLQVHKIGKDGEVDFSTFLTIMYRQQKQEDPENEIMVAMLMSDKQKKGVIPLKELRAKLTQMGEKLTPEEVDDLLKGVKVGPDGMVKYEEFVR 144          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLE_PATYE (Myosin, essential light chain, adductor muscle OS=Patinopecten yessoensis PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17
Identity = 53/132 (40.15%), Postives = 77/132 (58.33%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMK-DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 388
            F+   +G +   +LG V R LG NP   ++   +      G  ++ F EFL      M  +  +  +  EAF+ FD++  GFIS AELRHV+T LGE+LTDEE+DE+I   D+  D +G + YE+FVK +MA
Sbjct:   20 FWDGRDGAVDAFKLGDVCRCLGINPRNDDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLTDEEIDEIISLTDLQEDLEGNVKYEDFVKKVMA 150          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKL_ARATH (Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 50/122 (40.98%), Postives = 72/122 (59.02%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE-EVDEMIREADVDGDGQINYEEFVKVM 382
            G IT +EL T L  LG   +E E++ ++   D DG GTID+ EF++    + K  D +E + +AF+ FDKD +G I+  EL   M   G  + DE  + E+I E D D DG+IN+EEF  +M
Sbjct:  398 GTITYEELKTGLTRLGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYK-LDRDEHVYKAFQHFDKDNSGHITRDELESAMKEYG--MGDEASIKEVISEVDTDNDGRINFEEFCAMM 516          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17
Identity = 47/121 (38.84%), Postives = 72/121 (59.50%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT +EL   L+ +G N  E+E+ D++   D D +GTID+ EF+      +   + E+ L  AF  FDKD++GFI+  EL+      G  + D  ++EM+R+ D D DG+I+Y EFV +M
Sbjct:  505 GQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFI-AATLHLNKIEREDHLFAAFSYFDKDESGFITPDELQQACEEFG--VEDARIEEMMRDVDQDKDGRIDYNEFVAMM 622          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLE_AEQIR (Myosin essential light chain, striated adductor muscle OS=Aequipecten irradians PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 52/132 (39.39%), Postives = 78/132 (59.09%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMK-DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV--DGDGQINYEEFVKVMMA 388
            F+   +G +   +LG V R LG NP   ++   +      G  ++ F EFL      M  +  +  +  EAF+ FD++  GFIS AELRHV+T LGE+L+DE+VDE+I+  D+  D +G + YE+FVK +MA
Sbjct:   21 FWDGRDGAVDAFKLGDVCRCLGINPRNEDVF-AVGGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 151          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKH_ARATH (Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.787e-17
Identity = 49/121 (40.50%), Postives = 68/121 (56.20%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT +EL   L   G   +E E+Q ++   DADG GTID+ EF+      +   D EE L  AF+ FDKD +G+I+  EL   +   G      ++ E+I E D D DG+INY+EFV +M
Sbjct:  392 GTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFI-AATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFGMN-DGRDIKEIISEVDGDNDGRINYDEFVAMM 510          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPK4_ARATH (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana GN=CPK4 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.559e-17
Identity = 50/123 (40.65%), Postives = 74/123 (60.16%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFL--NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT +EL   L+ +G    E+E++ +++  D D +GTID+ EFL   L   KM   + EE L  AF  FDKD +G+I+  EL+   T  G  L D  +D+MI+E D+D DG+I++ EF  +M
Sbjct:  344 GTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTIDYGEFLAATLHINKM---EREENLVVAFSYFDKDGSGYITIDELQQACTEFG--LCDTPLDDMIKEIDLDNDGKIDFSEFTAMM 461          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16
Identity = 47/121 (38.84%), Postives = 71/121 (58.68%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT  EL   L+ +G    E+E++D+++  D D +GTID+ EF+      +   + EE L  AF  FDKD +G+I+  E++    + G  L D  +D+MI+E D D DGQI+Y EF  +M
Sbjct:  353 GTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVH-LNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMM 470          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16
Identity = 47/121 (38.84%), Postives = 71/121 (58.68%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT  EL   LR  G    + E++D++   D D +GTID+ EF+      +   + EE L  AFR FDKD +G+I+  EL+H     G  ++D  ++++I+E D D DG+I+Y EFV +M
Sbjct:  343 GAITFDELKAGLRRYGSTLKDTEIRDLMEAADIDKSGTIDYGEFIAATIH-LNKLEREEHLLSAFRYFDKDGSGYITIDELQHACAEQG--MSDVFLEDVIKEVDQDNDGRIDYGEFVAMM 460          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16
Identity = 47/121 (38.84%), Postives = 71/121 (58.68%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT +EL   L  LG   TEAE++ +++  D DG G+ID+ EF+     + +  +S E L +AF+ FDKD +G+I+  EL   +   G    D  + E++ + D D DG+INYEEF  +M
Sbjct:  410 GTITYEELKEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHR-LESNENLYKAFQHFDKDSSGYITIDELESALKEYGMG-DDATIKEVLSDVDSDNDGRINYEEFCAMM 528          
The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420
Match NameE-valueIdentityDescription
CALL4_XENTR1.989e-1740.00Calmodulin-like protein 4 OS=Xenopus tropicalis GN... [more]
MLE_PATYE3.393e-1740.15Myosin, essential light chain, adductor muscle OS=... [more]
CDPKL_ARATH4.431e-1740.98Calcium-dependent protein kinase 21 OS=Arabidopsis... [more]
CDPK2_ARATH4.431e-1738.84Calcium-dependent protein kinase 2 OS=Arabidopsis ... [more]
MLE_AEQIR5.787e-1739.39Myosin essential light chain, striated adductor mu... [more]
CDPKH_ARATH5.787e-1740.50Calcium-dependent protein kinase 17 OS=Arabidopsis... [more]
CDPK4_ARATH7.559e-1740.65Calcium-dependent protein kinase 4 OS=Arabidopsis ... [more]
CDPK_SOYBN1.289e-1638.84Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
CDPKQ_ARATH1.289e-1638.84Calcium-dependent protein kinase 26 OS=Arabidopsis... [more]
CDPK9_ARATH1.289e-1638.84Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bp
GTTCTATAGGCCTTTAGAAGGTTGCATTACCACCAAGGAGCTTGGCACTG
TCCTGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATG
ATCAATGAAGTGGATGCTGATGGTACTGGAACTATTGATTTTCCTGAATT
CCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGC
TGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCA
GCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGGGAGAAGCTTACTGA
TGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGATGGTGATGGCC
AGATAAATTACGAGGAATTTGTCAAGGTTATGATGGCTAAGTAAGTGACT
CCACCCAACCAAAACTTCCTGGGAAAAGAAGAAATTGGTTGATTAATATA
ATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGATAACTCTGAG
GTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTGTCTTGTGACT
GGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCCGCTCTTCTGT
GAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCCCTATTTCTTA
TTTCGAGATTTTGTGGATAAGAAATTGATATGTGAT
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