CF835306

Overview
NameCF835306
Unique NameCF835306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9834 contig Csv1_Contig9834:136..821. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.751e-16
Identity = 46/127 (36.22%), Postives = 73/127 (57.48%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK*VT 400
            G IT +EL   L+ +G N  E+E+ D++   D D +GTID+ EF+      +   + E+ L  AF  FDKD +G+I+  EL+      G  + D  ++E++R+ D D DG+I+Y EFV +M    +T
Sbjct:  469 GQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFI-AATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSIT 592          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPK5_SOLTU (Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16
Identity = 46/121 (38.02%), Postives = 70/121 (57.85%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT  EL   LR  G    + E++++++  D D +GTID+ EF+      +   D EE L  AF+ FDKD +G+I+  EL+    +    +TD   +++IRE D D DG+I+Y EFV +M
Sbjct:  391 GAITFDELKAGLRKYGSTLKDIEIRELMDAADVDNSGTIDYGEFIAATIH-LNKLDREEHLMAAFQYFDKDGSGYITVDELQQACAD--HNITDVFFEDIIREVDQDNDGRIDYGEFVAMM 508          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 49/122 (40.16%), Postives = 70/122 (57.38%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE-EVDEMIREADVDGDGQINYEEFVKVM 382
            G IT +EL + L  LG   +E E+Q +++  D DG GTID+ EF+     + K    E    +AF+ FDKD +GFI+  EL   M   G  + DE  + ++I E D D DG+INY+EF  +M
Sbjct:  400 GTITYEELKSGLARLGSKLSEVEVQQLMDAADVDGNGTIDYLEFITATMHRHKLESYEH---QAFQYFDKDNSGFITKDELESAMKEYG--MGDEATIKDIISEVDSDNDGRINYDEFCAMM 516          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKX_ARATH (Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 45/121 (37.19%), Postives = 71/121 (58.68%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT +EL   L  LG   TEAE++ +++  D DG G+ID+ EF+     + +  +S E + +AF+ FDKD +G+I+  EL   +   G    D  + E++ + D D DG+INY+EF  +M
Sbjct:  392 GTITYEELKEGLAKLGSRLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHR-LESNENVYKAFQHFDKDGSGYITTDELEAALKEYGMG-DDATIKEILSDVDADNDGRINYDEFCAMM 510          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKN_ARATH (Calcium-dependent protein kinase 23 OS=Arabidopsis thaliana GN=CPK23 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE-EVDEMIREADVDGDGQINYEEFVKVMMAK*VTPPNQNF 418
            G IT ++L T L  L    +E E+Q ++   D DG GTID+ EF++    + K    +E + +AF+  DKD+NG I+  EL   M   G  + DE  + E+I E D D DG+IN+EEF  +M      P  + +
Sbjct:  387 GTITYEQLQTGLSRLRSRLSETEVQQLVEASDVDGNGTIDYYEFISATMHRYK-LHHDEHVHKAFQHLDKDKNGHITRDELESAMKEYG--MGDEASIKEVISEVDTDNDGKINFEEFRAMMRCGTTQPKGKQY 517          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLE_BRAFL (Myosin, essential light chain OS=Branchiostoma floridae PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 47/127 (37.01%), Postives = 74/127 (58.27%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMK--DTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIR--EADVDGDGQINYEEFVKVMM 385
            +G I   +LG VLRS G NP+ AE++ +     A+    + F ++L +  + +   +  S E+  E  ++FDK+  G IS AELRHV+  LGEKLT+ +VDE++       D +G +NY+ F K +M
Sbjct:   24 DGKIDGAQLGDVLRSFGLNPSNAEVEKIAK---ANEGKRLSFDDYLAIHKQVLGQGEVGSYEDFFEGLKLFDKEGTGLISGAELRHVLATLGEKLTEAQVDELMAGGGGQEDAEGNVNYDTFAKYLM 147          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML36_ARATH (Probable calcium-binding protein CML36 OS=Arabidopsis thaliana GN=CML36 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 50/127 (39.37%), Postives = 73/127 (57.48%), Query Frame = 2
Query:    8 RPLEGCITTKELGTVLRSLGQNP-TEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            R  +G ++  +L ++L  LG +P TE E+  M+ EVD DG GTI   E  + +       DS E LKE F  FD D++G ISA EL  V + +G E+ T ++   MI + D DGDG + + EF ++M
Sbjct:   80 RDNDGAVSRHDLESLLSRLGPDPLTEEEINVMLKEVDCDGDGTIRLEELASRVVSLDPARDSTE-LKETFEFFDADRDGLISADELLRVFSTIGDERCTLDDCKRMIADVDEDGDGFVCFTEFSRMM 205          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML32_ARATH (Probable calcium-binding protein CML32 OS=Arabidopsis thaliana GN=CML32 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEEL--KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388
            +G I+  E    +R+   + T  E+ +M  E+D DG   ID  E+ + +    +    +E++  KEAF ++D D +G ISA+E+  V+  LGEK T  E   M+R  D DGDG +++EEF K MM+
Sbjct:   15 DGKISWDEFAEAIRAFSPSITSEEIDNMFREIDVDGDNQIDVAEYASCLMLGGEGNKEDEDIVMKEAFDLYDIDGDGKISASEIHVVLKRLGEKQTIAECIAMVRAVDADGDGFVSFEEF-KTMMS 139          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 48/125 (38.40%), Postives = 75/125 (60.00%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388
            +G I+  EL   LR +G    E E++ ++   D +G G +D+ EF+ ++    K  +++E  ++AF  FDKD +G+I + ELR  +T+ LGE      +D M RE D D DG+INY+EFV +M A
Sbjct:  377 DGKISYLELRAGLRKVGSQLGEPEIKLLMEVADVNGNGCLDYGEFVAVIIHLQK-MENDEHFRQAFMFFDKDGSGYIESEELREALTDELGEPDNSVIIDIM-REVDTDKDGKINYDEFVVMMKA 499          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPK5_ARATH (Calcium-dependent protein kinase 5 OS=Arabidopsis thaliana GN=CPK5 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 45/121 (37.19%), Postives = 70/121 (57.85%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT  EL   LR  G    + E+ D+++  D D +GTID+ EF+      +   + EE L  AF+ FDKD +GFI+  EL+      G  + D  ++++I+E D + DG+I+Y EFV++M
Sbjct:  416 GAITFDELKAGLRKYGSTLKDTEIHDLMDAADVDNSGTIDYSEFIAATIH-LNKLEREEHLVAAFQYFDKDGSGFITIDELQQACVEHG--MADVFLEDIIKEVDQNNDGKIDYGEFVEMM 533          
The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420
Match NameE-valueIdentityDescription
CDPK1_ARATH3.751e-1636.22Calcium-dependent protein kinase 1 OS=Arabidopsis ... [more]
CDPK5_SOLTU4.899e-1638.02Calcium-dependent protein kinase 5 OS=Solanum tube... [more]
CDPK_DAUCA6.399e-1640.16Calcium-dependent protein kinase OS=Daucus carota ... [more]
CDPKX_ARATH6.399e-1637.19Calcium-dependent protein kinase 33 OS=Arabidopsis... [more]
CDPKN_ARATH1.425e-1536.57Calcium-dependent protein kinase 23 OS=Arabidopsis... [more]
MLE_BRAFL1.862e-1537.01Myosin, essential light chain OS=Branchiostoma flo... [more]
CML36_ARATH1.862e-1539.37Probable calcium-binding protein CML36 OS=Arabidop... [more]
CML32_ARATH1.862e-1536.51Probable calcium-binding protein CML32 OS=Arabidop... [more]
CDPKU_ARATH1.862e-1538.40Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPK5_ARATH1.862e-1537.19Calcium-dependent protein kinase 5 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bp
GTTCTATAGGCCTTTAGAAGGTTGCATTACCACCAAGGAGCTTGGCACTG
TCCTGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATG
ATCAATGAAGTGGATGCTGATGGTACTGGAACTATTGATTTTCCTGAATT
CCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGC
TGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCA
GCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGGGAGAAGCTTACTGA
TGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGATGGTGATGGCC
AGATAAATTACGAGGAATTTGTCAAGGTTATGATGGCTAAGTAAGTGACT
CCACCCAACCAAAACTTCCTGGGAAAAGAAGAAATTGGTTGATTAATATA
ATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGATAACTCTGAG
GTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTGTCTTGTGACT
GGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCCGCTCTTCTGT
GAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCCCTATTTCTTA
TTTCGAGATTTTGTGGATAAGAAATTGATATGTGAT
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