CF835306

Overview
NameCF835306
Unique NameCF835306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9834 contig Csv1_Contig9834:136..821. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPK4_SOLTU (Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 44/121 (36.36%), Postives = 70/121 (57.85%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT  EL   LR  G    + E++++++  D D +GTID+ EF+      +   + EE L  AF+ FDKD +G+I+  E++     +   +TD   +++IRE D D DG+I+Y EFV +M
Sbjct:  413 GAITFDELKAGLRKYGSTLKDTEIRELMDAADVDNSGTIDYGEFIAATVH-LNKLEREEHLMAAFQYFDKDGSGYITVDEVQQAC--IEHNMTDVYFEDIIREVDQDNDGRIDYGEFVAMM 530          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: SPE2A_STRPU (Calcium-binding protein SPEC 2A OS=Strongylocentrotus purpuratus GN=SPEC2A PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 46/123 (37.40%), Postives = 77/123 (62.60%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE-KLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            +G IT++EL    +S+  + T+ ++ +M+  VD DG+  +DF EFL   A + +    E +L +AF   DKD NG +S  ELR  M+   +  +T++E+D +I +AD +GDG+I  EEF+K++
Sbjct:   27 DGKITSEELRAAFKSIEIDLTQEKIDEMMGMVDKDGSKDMDFSEFLMRKAEQWR--GREVQLTKAFVDLDKDHNGSLSPQELRTAMSACTDPPMTEKEIDAIIEKADCNGDGKICLEEFMKLI 147          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML37_ARATH (Calcium-binding protein CML37 OS=Arabidopsis thaliana GN=CML37 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 46/123 (37.40%), Postives = 72/123 (58.54%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLM-ARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            +G I+ +EL + +  LG   +  E+++++   D DG G IDF EFL LM      D +  +ELKEAF ++  +   FI+AA LR  ++ LGE  T +    MIR  D + DG ++++EFV +M
Sbjct:   62 DGKISGEELQSCVSLLGGALSSREVEEVVKTSDVDGDGFIDFEEFLKLMEGEDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQNDDGVLSFDEFVLMM 184          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML31_ARATH (Probable calcium-binding protein CML31 OS=Arabidopsis thaliana GN=CML31 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 49/126 (38.89%), Postives = 69/126 (54.76%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARK---MKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 385
            +G I   E    +R      T  E+  M   +D DG G ID  EF + +       KDT+ E  +KEAF ++D D +G ISA+E+  V+  LGEK T E+   M++  D D DG +N+EEF K+MM
Sbjct:   13 DGKILWDEFAEAIRVFSPQITSEEIDKMFIVLDVDGDGQIDDVEFASCLMVNGGGEKDTEEEVVMKEAFDLYDMDGDGKISASEIHVVLKRLGEKHTMEDCVVMVQTVDKDSDGFVNFEEF-KIMM 137          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLE_CAEEL (Myosin, essential light chain OS=Caenorhabditis elegans GN=mlc-3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 2
Query:   14 LEGCITTKELGTVLRSLGQNPTEAELQDMIN-EVDADGTGTIDFPEFLNLMAR--KMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388
            L+G I   ++G V R+ G  PT+A +      E    G   + F E+L +  +  K K+  +  +  E  +VFDK++ G I AAELRH++  LGE+L+ +E DE+++  + DG+G + YE+F+K ++A
Sbjct:   20 LDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQLAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADEADELLKGVE-DGEGMVKYEDFIKKVLA 146          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLE1_MUGCA (Myosin light chain 1, skeletal muscle isoform OS=Mugil capito PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 45/133 (33.83%), Postives = 76/133 (57.14%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGT--IDFPEFLNLMARKMKDTDSE--EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388
            F R  +  +   ++  ++R+LGQNPT  E+  ++    AD      ++F  FL ++   +   +    E+  E  RVFDK+ NG +  AELR V++ LGEK+T+ E+D ++   + D +G +NYE FVK +M+
Sbjct:   54 FDRVGDNKVAYNQIADIMRALGQNPTNKEVSKLLGNPSADDMTNKRVEFEAFLPMLQTIINSPNKAGFEDYVEGLRVFDKEGNGTVMGAELRIVLSTLGEKMTEAEIDALMAGQE-DENGVVNYEAFVKHIMS 185          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 45/121 (37.19%), Postives = 70/121 (57.85%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT +EL   L  +G +  ++E+  ++   D D +GTID+ EF+  M    K  + E+ L  AF  FD+D +G+I+  EL+      G  L D  +D+++RE D D DG+I+Y EFV +M
Sbjct:  453 GHITLEELKKGLDRVGADLKDSEILGLMQAADIDNSGTIDYGEFIAAMVHLNK-IEKEDHLFTAFSYFDQDGSGYITRDELQQACKQFG--LADVHLDDILREVDKDNDGRIDYSEFVDMM 570          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPK7_ARATH (Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.240e-15
Identity = 43/124 (34.68%), Postives = 74/124 (59.68%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388
            G I  +EL   L+  GQ   + +LQ ++   D DG GT+++ EF+ +    +K   ++E L +AF  FD++Q+G+I   ELR  + + L    ++E +  ++++ D D DG+I+YEEFV +M A
Sbjct:  378 GKINLEELKYGLQKAGQQIADTDLQILMEATDVDGDGTLNYSEFVAVSVH-LKKMANDEHLHKAFNFFDQNQSGYIEIDELREALNDELDNTSSEEVIAAIMQDVDTDKDGRISYEEFVAMMKA 500          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: EFCB2_MOUSE (EF-hand calcium-binding domain-containing protein 2 OS=Mus musculus GN=Efcab2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14
Identity = 45/125 (36.00%), Postives = 72/125 (57.60%), Query Frame = 2
Query:   26 ITTKELGTVLRSLGQNPTEAELQDMINEVDADG-TGTIDFPEFLNLMARKMKDTD----SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 385
            +  +E+GT++RSLG  PTE EL D I E++ +  TG I F +F+ +M R + +      +E+ L  AF V D  + GF++  EL   MT  GE  + EE++EM+  A       INY +++ +M+
Sbjct:   36 VDVREIGTIIRSLGCCPTEGELHDFIAEIEEEEPTGYIRFEKFIPVMTRALVERRYRPAAEDILLRAFEVLDPAKRGFLTKDELVKYMTEEGEPFSQEEMEEMLSAAIDPESNTINYRDYITMMV 160          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CANB_DEBHA (Calcineurin subunit B OS=Debaryomyces hansenii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.576e-14
Identity = 50/129 (38.76%), Postives = 74/129 (57.36%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTDEE----VDEMIREADVDGDGQINYEEFVKVMMAK 391
            G I   E  T+   +  NP  A L D+ +E   DG GTIDF EF+  ++     T   ++LK AF+++D D++G+I   EL  VM  + G+ L DEE    VD+ + EAD DGDG++N+ EF   + +K
Sbjct:   39 GTIDKNEFLTI-PGISSNPLAARLMDVFDE---DGNGTIDFQEFIMGLSAFSGKTSKLDKLKFAFKIYDIDRDGYIGNGELFIVMKMMVGKNLQDEELQQIVDKTMMEADEDGDGRLNFHEFKNAVDSK 163          
The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420
Match NameE-valueIdentityDescription
CDPK4_SOLTU1.862e-1536.36Calcium-dependent protein kinase 4 OS=Solanum tube... [more]
SPE2A_STRPU5.417e-1537.40Calcium-binding protein SPEC 2A OS=Strongylocentro... [more]
CML37_ARATH5.417e-1537.40Calcium-binding protein CML37 OS=Arabidopsis thali... [more]
CML31_ARATH5.417e-1538.89Probable calcium-binding protein CML31 OS=Arabidop... [more]
MLE_CAEEL7.075e-1535.16Myosin, essential light chain OS=Caenorhabditis el... [more]
MLE1_MUGCA7.075e-1533.83Myosin light chain 1, skeletal muscle isoform OS=M... [more]
CDPKK_ARATH9.240e-1537.19Calcium-dependent protein kinase 20 OS=Arabidopsis... [more]
CDPK7_ARATH9.240e-1534.68Calcium-dependent protein kinase 7 OS=Arabidopsis ... [more]
EFCB2_MOUSE1.576e-1436.00EF-hand calcium-binding domain-containing protein ... [more]
CANB_DEBHA1.576e-1438.76Calcineurin subunit B OS=Debaryomyces hansenii GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bp
GTTCTATAGGCCTTTAGAAGGTTGCATTACCACCAAGGAGCTTGGCACTG
TCCTGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATG
ATCAATGAAGTGGATGCTGATGGTACTGGAACTATTGATTTTCCTGAATT
CCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGC
TGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCA
GCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGGGAGAAGCTTACTGA
TGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGATGGTGATGGCC
AGATAAATTACGAGGAATTTGTCAAGGTTATGATGGCTAAGTAAGTGACT
CCACCCAACCAAAACTTCCTGGGAAAAGAAGAAATTGGTTGATTAATATA
ATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGATAACTCTGAG
GTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTGTCTTGTGACT
GGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCCGCTCTTCTGT
GAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCCCTATTTCTTA
TTTCGAGATTTTGTGGATAAGAAATTGATATGTGAT
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