CF835306
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14 Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +G ++ +EL LR E+E+Q +I VD G GT+D+ EF+ + K ++E L++AF FDKD NG+I EL + G + +++ +E D D DG+I+YEEF +M Sbjct: 372 DGIVSIEELKAGLRDFSTQLAESEVQMLIEAVDTKGKGTLDYGEFVAVSLHLQK-VANDEHLRKAFSYFDKDGNGYILPQELCDALKEDGGDDCVDVANDIFQEVDTDKDGRISYEEFAAMM 492
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CANB1_RAT (Calcineurin subunit B type 1 OS=Rattus norvegicus GN=Ppp3r1 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14 Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 53 LRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 L L QNP +Q +I+ D DG G +DF EF+ +++ D E++L+ AFR++D D++G+IS EL V+ NL + + VD+ I AD DGDG+I++EEF V+ Sbjct: 46 LPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CANB1_MOUSE (Calcineurin subunit B type 1 OS=Mus musculus GN=Ppp3r1 PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14 Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 53 LRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 L L QNP +Q +I+ D DG G +DF EF+ +++ D E++L+ AFR++D D++G+IS EL V+ NL + + VD+ I AD DGDG+I++EEF V+ Sbjct: 46 LPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CANB1_HUMAN (Calcineurin subunit B type 1 OS=Homo sapiens GN=PPP3R1 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14 Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 53 LRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 L L QNP +Q +I+ D DG G +DF EF+ +++ D E++L+ AFR++D D++G+IS EL V+ NL + + VD+ I AD DGDG+I++EEF V+ Sbjct: 46 LPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CANB1_BOVIN (Calcineurin subunit B type 1 OS=Bos taurus GN=PPP3R1 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14 Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 2 Query: 53 LRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 L L QNP +Q +I+ D DG G +DF EF+ +++ D E++L+ AFR++D D++G+IS EL V+ NL + + VD+ I AD DGDG+I++EEF V+ Sbjct: 46 LPELQQNPL---VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 48/145 (33.10%), Postives = 78/145 (53.79%), Query Frame = 2 Query: 17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDT---------------------DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFVKVM 382 +G IT KELG ++ G + EL ++++DA+G G +D EF L + D D +E ++EAF VFD++ +GFI+ ELR V+++LG K T ++ MI D DGDG+++++EF ++M Sbjct: 18 DGRITKKELGESFKNFGIFIPDDELDATMDKIDANGDGCVDVEEFGLLYRSILGDDAAGRAPRTAAAAIGGEGGAPDDEDEGMREAFNVFDQNGDGFITVDELRSVLSSLGLKHGRTADDCRRMISMVDADGDGRVDFKEFKQMM 162
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML22_ORYSJ (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica GN=CML22 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 53/142 (37.32%), Postives = 78/142 (54.93%), Query Frame = 2 Query: 2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKM-----------KDTDSEEE--LKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFVKVM 382 F R +G IT +EL L LG EL +I +DA+G G +D EF L M K+ + EE+ ++EAFRVFD + +G+I+ EL V+ +LG K T EE MI + D DGDG++++ EF+++M Sbjct: 100 FDRNGDGRITREELEDSLGKLGIPVPADELAAVIARIDANGDGCVDVEEFGELYRSIMAGGDDSKDGRAKEEEEEEDGDMREAFRVFDANGDGYITVDELGAVLASLGLKQGRTAEECRRMIGQVDRDGDGRVDFHEFLQMM 241
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 2 Query: 20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G I EL L+ LG + +LQ +++ D D G +D EF+ + ++ ++E LK+AF FD++ NG+I ELR +++ LG ++E VD +IR+ D D DG+I+YEEFV +M Sbjct: 382 GKINIDELKIGLQKLGHAIPQDDLQILMDAGDIDRDGYLDCDEFIAISVH-LRKMGNDEHLKKAFAFFDQNNNGYIEIEELREALSDELGT--SEEVVDAIIRDVDTDKDGRISYEEFVTMM 500
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CANB_SCHPO (Calcineurin subunit B OS=Schizosaccharomyces pombe GN=cnb1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 2 Query: 59 SLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK*VT 400 S+ NP + L + VD DG G +DF EF+N ++ + EE+LK AF+++D D++G+IS EL V+ TNL E + VD+ I E D D DG+I++EEF ++ VT Sbjct: 51 SVASNPLASRL---FSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEFKDIVSGSNVT 166
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CABP3_HUMAN (Calcium-binding protein 3 OS=Homo sapiens GN=CABP3 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.822e-14 Identity = 39/90 (43.33%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 128 GTIDFPEFLNLMARKMKDTDSE----EELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382 G +DF +F+ LM K+ + +E+++AF+ FD + +G I+ AEL+ M L GE+LT E+ E++READV+GDG +++EEFVK+M Sbjct: 101 GRVDFDDFVELMTPKLLAETAGMIGVQEMRDAFKEFDTNGDGEITLAELQQAMQRLLGERLTPREISEVVREADVNGDGTVDFEEFVKMM 190 The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bpback to top |