CF835306

Overview
NameCF835306
Unique NameCF835306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CANB_ASHGO (Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 45/126 (35.71%), Postives = 73/126 (57.94%), Query Frame = 2
Query:    8 RPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-TNLGEKLTDEE----VDEMIREADVDGDGQINYEEF 370
            R   G I   E  ++   +  NP    + ++    DAD +G +DF EF++ ++     +D EE+L+ AF+++D D++G+IS  EL  V+   +G  L DE+    VD  I E DVDGDG++++EEF
Sbjct:   35 RDSSGSIDKNEFMSI-PGVSSNPLAGRIMEVF---DADNSGDVDFQEFISGLSVFSGRSDKEEKLRFAFKIYDIDKDGYISNGELFIVLKIMVGNNLEDEQLQQVVDRTIMENDVDGDGKLSFEEF 156          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKM_ARATH (Calcium-dependent protein kinase 22 OS=Arabidopsis thaliana GN=CPK22 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE-EVDEMIREADVDGDGQINYEEFVKVMMAK*VTPPNQNFLG 424
            G IT +EL   L   G   +E E++ ++   D DG GTID+ EF++    + +  + +E L +AF+ FDKD +G I+  E+   M   G  + DE    ++I E D + DG+I+YEEF   MM   +  P    +G
Sbjct:  364 GSITYEELKMGLNRHGSKLSETEVKQLMEAADVDGNGTIDYIEFISATMHRHR-LERDEHLYKAFQYFDKDGSGHITKEEVEIAMKEHG--MGDEANAKDLISEFDKNNDGKIDYEEFC-TMMRNGILQPQGKLVG 495          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CDPKE_ARATH (Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 40/121 (33.06%), Postives = 72/121 (59.50%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            G IT  ELG  L+ LG    + ++Q +++  D D  G +D  EF+ +    ++   ++E LK+AF  FDK+++G+I   ELR  + +  +  ++E V+ +I + D + DG+I+Y+EF  +M
Sbjct:  373 GKITITELGIGLQKLGIVVPQDDIQILMDAGDVDKDGYLDVNEFVAISVH-IRKLGNDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEVVEAIILDVDTNKDGKISYDEFATMM 492          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLE_DICDI (Myosin, essential light chain OS=Dictyostelium discoideum GN=mlcE PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 41/132 (31.06%), Postives = 75/132 (56.82%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEE--ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG-DGQINYEEFVKVMMA 388
            F +  +G ++ +++G  LRSLG++PT A+++ +  E+   G    D     ++  +    T  E+  E+ +AF+  DK+ +G I  AELR ++T LG+ L+  EVDE+ +E  VD   G ++Y   V  +++
Sbjct:   15 FDKDNDGKVSVEDIGACLRSLGKSPTMADIEALKTEI---GAKEFDINTLKSIYKKPNIKTPQEQQKEMLDAFKALDKEGHGTIQGAELRQLLTTLGDYLSTAEVDELFKEISVDSTTGAVSYASLVNTIVS 143          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: LPS1B_LYTPI (Calcium-binding protein LPS1-beta (Fragment) OS=Lytechinus pictus PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 46/126 (36.51%), Postives = 69/126 (54.76%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDT-DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            +G ++  EL  ++     +  E E Q +I  VD +  G + F EFL  M    K+   S +E+K+ F   DKD NG IS  EL   +  +  KL +   +++I+EAD DGDG +N EEFV  ++AK
Sbjct:   33 DGTVSCAELAKLM-----DCPEEEAQRIITGVDVNCDGRMQFDEFLLYMEGYTKERLYSSDEIKQMFDDLDKDGNGRISPDELSKGVGEISTKLVEGMANKLIQEADKDGDGHVNMEEFVDTLVAK 153          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: YNE5_CAEEL (Uncharacterized calcium-binding protein R08D7.5 OS=Caenorhabditis elegans GN=R08D7.5 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 45/130 (34.62%), Postives = 70/130 (53.85%), Query Frame = 2
Query:   38 ELGTVLRSLGQNPTEAELQDMINEVDADGTGTI----------DFPEFLNLMARKMKDTDSEE-----ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            +L  VLR+LG +P  +++Q+M  ++  DG   +          D  E  N +  K  + DS E     E++ AF++FD +  G I+ A L+ V   LGE L D + DEMIREA  D +  IN ++F ++M
Sbjct:   14 QLKMVLRALGYDPRNSKVQEMTRKIK-DGRSMVMGWHGEKDYMDVDELWNALQSKDDEGDSTEDKVTTEMRSAFKLFDPESKGTITVANLKMVAKELGETLADADFDEMIREAGGDNNTGINEQQFFEIM 142          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML34_ARATH (Probable calcium-binding protein CML34 OS=Arabidopsis thaliana GN=CML34 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 42/128 (32.81%), Postives = 69/128 (53.91%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 385
            F +  +G ++  E   V  +     T+ ++     E+D DG G ++  EF + +         E+ LKE F   D D +G I A+E    MT+LG+K T+E   E +R ADVDGDG +N++EF+ +++
Sbjct:   10 FDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI---------EKMLKEVFVFCDVDGDGKIPASESYVTMTSLGKKFTEETSAEKVRAADVDGDGYLNFDEFMALVI 128          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML19_ORYSJ (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica GN=CML19 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 47/132 (35.61%), Postives = 76/132 (57.58%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRS-LGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEE---LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 385
            F R  +G I+  EL   +++ LG++ +  E + +++  D D  G +D  EF  L A +++  D EE    L EAFR+++ +  G I+ A L+ +++ LG     EE   MI   D+DGDG I++EEF K+MM
Sbjct:   15 FDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLLDEEEFTKL-AVQLEMGDEEERCRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQGIEECQTMICRFDLDGDGVISFEEF-KIMM 144          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML23_ORYSJ (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica GN=CML23 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 43/133 (32.33%), Postives = 73/133 (54.89%), Query Frame = 2
Query:   17 EGCITTKELGTVLR-SLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEE--------LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388
            +G I+  EL   ++ SLG++  + E+Q ++   D DG G +D  EF+ L+     D D EE+        L+EAF +++ +  G I+   L+ +++ LG  L   E   MI   D++GDG + ++EF  +MMA
Sbjct:   19 DGKISATELRLCVKASLGEDMPDEEVQALMALADTDGDGLLDEEEFVRLVTEMEADGDEEEDDDDETCRCLREAFAMYEMEGRGCITPLSLKLMLSKLGTHLDVAECQAMICRFDMNGDGVLTFDEFKTMMMA 151          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CML21_ORYSJ (Probable calcium-binding protein CML21 OS=Oryza sativa subsp. japonica GN=CML21 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 54/147 (36.73%), Postives = 75/147 (51.02%), Query Frame = 2
Query:    2 FYRPLEGCITTKELGTVLRSLGQN----PTEAELQDMINEVDADGTGTIDFPEFLNL------------MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 388
            F R  +G IT  EL   L  LG      P  A L  ++    A G   + F EF  L            +A    + + E +++EAF VFD+D +G+ISAAEL+ V++ +G  E      V +MI  AD D DG+++YEEF K MMA
Sbjct:   49 FDRDGDGVITPAELSGALCRLGARGEAPPAAAALDAVVAAYIAPGMAGLRFAEFEALHAELAGLGGRQAVAAAEAEEEKEADMREAFGVFDEDGDGYISAAELQAVLSRMGLPEAACMARVRDMIAAADRDSDGRVDYEEF-KAMMA 194          
The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420
Match NameE-valueIdentityDescription
CANB_ASHGO6.622e-1335.71Calcineurin subunit B OS=Ashbya gossypii GN=CNB1 P... [more]
CDPKM_ARATH8.648e-1334.56Calcium-dependent protein kinase 22 OS=Arabidopsis... [more]
CDPKE_ARATH8.648e-1333.06Calcium-dependent protein kinase 14 OS=Arabidopsis... [more]
MLE_DICDI1.129e-1231.06Myosin, essential light chain OS=Dictyostelium dis... [more]
LPS1B_LYTPI1.129e-1236.51Calcium-binding protein LPS1-beta (Fragment) OS=Ly... [more]
YNE5_CAEEL1.475e-1234.62Uncharacterized calcium-binding protein R08D7.5 OS... [more]
CML34_ARATH1.475e-1232.81Probable calcium-binding protein CML34 OS=Arabidop... [more]
CML19_ORYSJ1.475e-1235.61Putative calcium-binding protein CML19 OS=Oryza sa... [more]
CML23_ORYSJ2.516e-1232.33Putative calcium-binding protein CML23 OS=Oryza sa... [more]
CML21_ORYSJ2.516e-1236.73Probable calcium-binding protein CML21 OS=Oryza sa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bp
GTTCTATAGGCCTTTAGAAGGTTGCATTACCACCAAGGAGCTTGGCACTG
TCCTGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATG
ATCAATGAAGTGGATGCTGATGGTACTGGAACTATTGATTTTCCTGAATT
CCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGC
TGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCA
GCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGGGAGAAGCTTACTGA
TGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGATGGTGATGGCC
AGATAAATTACGAGGAATTTGTCAAGGTTATGATGGCTAAGTAAGTGACT
CCACCCAACCAAAACTTCCTGGGAAAAGAAGAAATTGGTTGATTAATATA
ATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGATAACTCTGAG
GTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTGTCTTGTGACT
GGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCCGCTCTTCTGT
GAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCCCTATTTCTTA
TTTCGAGATTTTGTGGATAAGAAATTGATATGTGAT
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