CF835306

Overview
NameCF835306
Unique NameCF835306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CABP7_RAT (Calcium-binding protein 7 OS=Rattus norvegicus GN=Cabp7 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 33/69 (47.83%), Postives = 49/69 (71.01%), Query Frame = 2
Query:  185 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            D  EE++EAF+VFD+D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++  K
Sbjct:   33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPK 101          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CABP7_PAPAN (Calcium-binding protein 7 OS=Papio anubis GN=CABP7 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 33/69 (47.83%), Postives = 49/69 (71.01%), Query Frame = 2
Query:  185 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            D  EE++EAF+VFD+D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++  K
Sbjct:   33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPK 101          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CABP7_MOUSE (Calcium-binding protein 7 OS=Mus musculus GN=Cabp7 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 33/69 (47.83%), Postives = 49/69 (71.01%), Query Frame = 2
Query:  185 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            D  EE++EAF+VFD+D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++  K
Sbjct:   33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPK 101          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CABP7_HUMAN (Calcium-binding protein 7 OS=Homo sapiens GN=CABP7 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12
Identity = 33/69 (47.83%), Postives = 49/69 (71.01%), Query Frame = 2
Query:  185 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 391
            D  EE++EAF+VFD+D NGFIS  EL   M +LG    + E++ +I+  D+DGDGQ+++EEFV ++  K
Sbjct:   33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLGPK 101          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: DYL3_CHLRE (Dynein 18 kDa light chain, flagellar outer arm OS=Chlamydomonas reinhardtii PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 46/122 (37.70%), Postives = 75/122 (61.48%), Query Frame = 2
Query:   20 GCITTKELGTVLRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMA--RKMKDTDSEE-ELKEAFRVF--DKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 370
            G I TKEL T L +LGQNPTE ++  MI++VD DG+  I+F EF+ ++   ++M   D++E +  +AF     + D+ G I   +LR +      +LT   VD ++++AD D +G ++Y+EF
Sbjct:   36 GTIDTKELRTALSALGQNPTEEDMFVMISQVDQDGSRCIEFKEFVRVIQINKQMSAKDADEADTLDAFVALGGNLDKTGRILVDKLRSICEEF--ELT-VNVDRLVKDADRDLNGFLSYDEF 154          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CANB1_DROME (Calcineurin subunit B type 1 OS=Drosophila melanogaster GN=CanB PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 2
Query:   53 LRSLGQNPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            L  L QNP    +Q +I+  DADG G +DF EF+  +++     D   +L+ AFR++D D +G+IS  EL  V+      NL +    + VD+ I  AD D DG+I+++EF  V+
Sbjct:   46 LPELQQNPL---VQRVIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTICFADKDEDGKISFDEFCSVV 157          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: EFH51_TRYCR (EF-hand protein 5 variant 1 OS=Trypanosoma cruzi PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 38/126 (30.16%), Postives = 75/126 (59.52%), Query Frame = 2
Query:   26 ITTKELGTVLRSLGQNPTEAELQD---MINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD-GDGQINYEEFVKVMMAK 391
            I +K++  +++++G + TE E  D   +I + +      + F +FL LM R++ DT ++E L+ AF  +DK + G+++  +   +   LGE+ T EE++E++  A+VD  D +I+Y  FV  + ++
Sbjct:   80 IPSKDVYALMQNVGMHLTEEEFHDALRVIGQSEPQNADELSFSDFLLLMTREVDDTMADE-LRSAFFHYDKYKTGYVTRKQFTELFATLGERSTPEELEELLAVAEVDETDDKIDYNRFVNELTSR 204          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: CANB_KLULA (Calcineurin subunit B OS=Kluyveromyces lactis GN=CNB1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11
Identity = 37/98 (37.76%), Postives = 61/98 (62.24%), Query Frame = 2
Query:   98 MINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 376
            +I   D D +G +DF EF+  ++      +++ +L+ AFR++D D++G+IS  EL  V+     TNL ++   + VD  I E DVDGDG++++EEF K
Sbjct:   61 IIEVFDEDNSGDVDFQEFITSLSIFSGRGETDAKLRFAFRIYDIDKDGYISNGELFIVLKIMVGTNLEDEQLQQIVDRTIMENDVDGDGKLSFEEFKK 158          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MYL5_FELCA (Myosin light chain 5 OS=Felis catus GN=MYL5 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.130e-11
Identity = 39/123 (31.71%), Postives = 69/123 (56.10%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQ-NPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            +G I  ++L     SLG+ N  + EL  M+ E     +G I+F  FLN+   K+  TD+EE +  AF++ D +  G I+   ++ ++ +  +K+T EEVD+M + A +D  G ++Y+    V+
Sbjct:   47 DGFIDKEDLKDTYASLGKTNIKDDELDAMLKEA----SGPINFTMFLNMFGAKLTGTDAEETILNAFKMLDPEGKGSINKDYIKRLLMSQADKMTAEEVDQMFQFATIDAAGNLDYKALSYVL 165          
BLAST of CF835306 vs. ExPASy Swiss-Prot
Match: MLRV_HUMAN (Myosin regulatory light chain 2, ventricular/cardiac muscle isoform OS=Homo sapiens GN=MYL2 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.130e-11
Identity = 39/123 (31.71%), Postives = 63/123 (51.22%), Query Frame = 2
Query:   17 EGCITTKELGTVLRSLGQ-NPTEAELQDMINEVDADGTGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 382
            +G I   +L     +LG+ N    E+ +MI E      G I+F  FL +   K+K  D EE +  AF+VFD +  G + A  +R ++T   E+ + EEVD+M      D  G ++Y+  V ++
Sbjct:   41 DGFIDKNDLRDTFAALGRVNVKNEEIDEMIKEAP----GPINFTVFLTMFGEKLKGADPEETILNAFKVFDPEGKGVLKADYVREMLTTQAERFSKEEVDQMFAAFPPDVTGNLDYKNLVHII 159          
The following BLAST results are available for this feature:
BLAST of CF835306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420
Match NameE-valueIdentityDescription
CABP7_RAT9.562e-1247.83Calcium-binding protein 7 OS=Rattus norvegicus GN=... [more]
CABP7_PAPAN9.562e-1247.83Calcium-binding protein 7 OS=Papio anubis GN=CABP7... [more]
CABP7_MOUSE9.562e-1247.83Calcium-binding protein 7 OS=Mus musculus GN=Cabp7... [more]
CABP7_HUMAN9.562e-1247.83Calcium-binding protein 7 OS=Homo sapiens GN=CABP7... [more]
DYL3_CHLRE1.249e-1137.70Dynein 18 kDa light chain, flagellar outer arm OS=... [more]
CANB1_DROME1.249e-1137.39Calcineurin subunit B type 1 OS=Drosophila melanog... [more]
EFH51_TRYCR1.631e-1130.16EF-hand protein 5 variant 1 OS=Trypanosoma cruzi P... [more]
CANB_KLULA1.631e-1137.76Calcineurin subunit B OS=Kluyveromyces lactis GN=C... [more]
MYL5_FELCA2.130e-1131.71Myosin light chain 5 OS=Felis catus GN=MYL5 PE=2 S... [more]
MLRV_HUMAN2.130e-1131.71Myosin regulatory light chain 2, ventricular/cardi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06P23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835306 ID=CF835306; Name=CF835306; organism=Citrus sinensis; type=EST; length=686bp
GTTCTATAGGCCTTTAGAAGGTTGCATTACCACCAAGGAGCTTGGCACTG
TCCTGAGGTCACTGGGTCAGAACCCCACTGAGGCTGAGCTCCAGGACATG
ATCAATGAAGTGGATGCTGATGGTACTGGAACTATTGATTTTCCTGAATT
CCTAAACCTCATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGC
TGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCA
GCTGCTGAGCTGCGCCATGTGATGACAAACCTAGGGGAGAAGCTTACTGA
TGAGGAAGTCGATGAGATGATAAGGGAAGCTGATGTCGATGGTGATGGCC
AGATAAATTACGAGGAATTTGTCAAGGTTATGATGGCTAAGTAAGTGACT
CCACCCAACCAAAACTTCCTGGGAAAAGAAGAAATTGGTTGATTAATATA
ATTGGTTCCCTAGTTTCCTTTTTTATAAATTTTAATTTGATAACTCTGAG
GTCAAGCTAAAGGAAGCATGTTGTCTCCTGCTTCAATTTGTCTTGTGACT
GGAGCAACTTTTCAGTTTTTTAATGTTTTAGTTTTTTTCCGCTCTTCTGT
GAACATTGTTTCTGTTAAATGAGTGACTCGTTGATCTGCCCTATTTCTTA
TTTCGAGATTTTGTGGATAAGAAATTGATATGTGAT
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