CF835329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 9.314e-24 Identity = 66/181 (36.46%), Postives = 107/181 (59.12%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYS-SSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMR-------GEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R +I+IK+I+N T+RQVTF KRR G+ KKA ELSVLCDA+VALI+FS+ G+L+EYS ++++K +++++ P L+E N +E+A+ H ++ ++ G+ + LSL+EL++LE LE G+ ++ N + +R L +N LR ++AE Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSGAP-----LIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAE 176
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.216e-23 Identity = 65/178 (36.52%), Postives = 103/178 (57.87%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLL-------RQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQV 712 M R ++++K+I+N RQVTFSKRR G+ KKA ELSVLCDA+VALIIFS+ GKL+E+ S+ + + LEK+ N + + L + ++E + L R M GE++ LS++ELQ+LE+ LE L + ++L+R+ + L E N++L+ ++ Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQGSN------SALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 172
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.216e-23 Identity = 64/183 (34.97%), Postives = 109/183 (59.56%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS--SSMKEILEKHR----VHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEVSNA 730 M R KI+IK+I+N+T RQVTFSKRR G+ KKA EL+VLCDA V ++IFS+TGK+FEY S S++E++E+++ H + + Q +E+ ++N E + +R+ G+++ L+L+++ LE+ LE + +V + L+R+ ++L ++N L + + E A Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQQILLEMTRMKN--------EMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMINENQQA 175
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.216e-23 Identity = 66/177 (37.29%), Postives = 103/177 (58.19%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSS-MKEILEKHRVHS---KNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R ++Q+K+I+N RQVTFSKRR G+ KKA E+SVLCDA+V LI+FS GKLFEY++ S M+ +LE++ +S + L D S LE+ E +++ + GE++ L+++ELQ LE L+ L + + LQ++ + L E+N +L ++V E Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARL-EVLQRNQ--KHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKE 174
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23 Identity = 66/175 (37.71%), Postives = 99/175 (56.57%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS--SSMKEILEKHRVHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R KI+IKKI+N TARQVTFSKRR G+ KK ELS+LCDA + LI+FSATGKL E+ S + M ++++++ +H+ L D + QL ++ +L +E LR G ++ + EL LER LE + +V L R+ ++L E+N + + + E Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRY-LHTNGLRLPDHHDDQEQL--HHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHE 172
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23 Identity = 65/179 (36.31%), Postives = 104/179 (58.10%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS--SSMKEILEKHR----VHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R KI+IK+I+NAT RQVTFSKRR G+ KKA EL+VLCDA V ++IFS+TGK+FEY S S++E++E ++ H + + Q VE+ + N E + +R+ G+++ L+L ++ LE+ LE + +V + L+R+ +L ++N L + + E Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVTNTHFEEINHDQQIFVEMTRMRN--------EMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQLDNLRRKEHILEDQNSFLCRMINE 171
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23 Identity = 73/184 (39.67%), Postives = 108/184 (58.70%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEY-SSSSMKEILEKHR------VHSKNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEVSNA 730 M R ++++K I+N RQVTF+KRR+ + KKA ELSVLCDA+VALIIFS GKL+E+ SS+SM + LEK++ S + R Q S + L N EA ++S R + GE++ L +EL++LER L+ L ++ +LQRR ++L E N+ L+++ E S A Sbjct: 1 MGRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQKCNFGSPESTIISRETQSSQQEYLKLKNRV-----EALQRSQ--RNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQA 177
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.075e-23 Identity = 67/179 (37.43%), Postives = 112/179 (62.57%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEY-SSSSMKEILEKHRVHS-KNLERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMR---GEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAEV 721 M R ++++K+I+N RQVTF+KRR G+ KKA ELSVLCDA+V+LI+FS GKL+E+ S+S+M + LE+++ S ++E ++P+ EL+ N+Y K +L RQ R GE++ L+ +EL++LER L+ L +V ++LQ + +L++ N L ++ ++ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVSLIVFSNRGKLYEFCSTSNMLKTLERYQKCSYGSIEVNNKPAKELE----NSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDM 175
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.539e-23 Identity = 67/172 (38.95%), Postives = 103/172 (59.88%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSS--SSMKEILEKHRVHSKNL---ERVDQPSVELQLLENNNYSMLFKEAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERL 700 M R KI+IK+I+N+T RQVTFSKRR GI KKA E+SVLCDA+V ++IFS+ GKL++Y S +S+ ILEK++ +S + E+ S E+ ++ N +M + LR ++GE+++ L +EL +E +L+ G+ V R K+L +EN+ L Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIE--------LRHLKGEDLNSLQPKELIMIEEALDNGIVNVNDKLMDHWERHV----RTDKMLEDENKLL 160
BLAST of CF835329 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.622e-23 Identity = 67/175 (38.29%), Postives = 104/175 (59.43%), Query Frame = 2 Query: 200 MAREKIQIKKIDNATARQVTFSKRRRGIFKKAEELSVLCDADVALIIFSATGKLFEYSSSSMKEILEKHRVHSKNLERVDQPSVE-LQLLENNNYSMLFK-EAAEKSHLLRQMRGEEIHGLSLEELQKLERSLEVGLGRVXXXXXXXXXXXXNELQRRGKLLMEENERLRQQVAE 718 M R K+++K+I+N RQVTFSKR+ G+ KKA ELSVLCDA+V+LIIFS GKL+E+S+ + +E++ NL +D ++E Q L + K E+ ++H R + GE++ G+S++ELQ LER LE L EL+R+ + L + N +L+ + + Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYRCKDNL--LDNDTLEDTQGLRQEVTKLKCKYESLLRTH--RNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKLKLETED 171 The following BLAST results are available for this feature:
BLAST of CF835329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835329 ID=CF835329; Name=CF835329; organism=Citrus sinensis; type=EST; length=732bpback to top |