CF835380
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.773e-26 Identity = 58/111 (52.25%), Postives = 75/111 (67.57%), Query Frame = -2 Query: 228 KLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 560 K+ ++LCM+V P A+A+TCGQV+ +LAPC+ +L + GP+ CC GV+ L A+TT DRQ AC CLK AA S L+L AA LP C V+IPYKIS S DC KV+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.496e-25 Identity = 58/115 (50.43%), Postives = 72/115 (62.61%), Query Frame = -2 Query: 228 ALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMP--CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 566 +LKL +VLC+LV PL+ AI+ QV SL PC+G++R P P C G+RSL +AAR DRQ AC C+K A I +N AAGLPG C V IPYKIS S DC +V+ Sbjct: 6 SLKLACVVVLCLLVDAPLAQGAISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.496e-25 Identity = 50/90 (55.56%), Postives = 67/90 (74.44%), Query Frame = -2 Query: 231 ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 500 +TCGQV G+LA CIGFL+ GG +P CC GV+++ ++RTT DR+ C+CLK AA ++ +N NNA LPG CGV+IPYKISTS +C + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 9.700e-25 Identity = 54/114 (47.37%), Postives = 76/114 (66.67%), Query Frame = -2 Query: 231 AALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPM-PCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 569 A + L++A ++ ML P +A A+ CGQV + PC+ +++ GGP P CCNGVR L+ A+++ DRQT CNCLK AR I +LNLNNAA +P C V++PY IS DC ++ Sbjct: 4 AQVLLMAAALVLMLTAAPRAAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.401e-23 Identity = 56/118 (47.46%), Postives = 79/118 (66.95%), Query Frame = -2 Query: 231 SQMAALKLVS-ALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 578 ++ AA +LV A+V ML+ + AI+CGQVS +L+PCI + R +G P+ CC+GV+ L AA++T D+Q AC CLK A SI +N+ +G+PG CGVS+P+ IS S DC KV Sbjct: 2 ARAAATQLVLVAMVAAMLLVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.829e-23 Identity = 48/90 (53.33%), Postives = 64/90 (71.11%), Query Frame = -2 Query: 231 ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 500 ++CG V+ +A CI +LR GP+P CCNGV++L +A TT DR+TAC CL A+++I +N AAGLP CGVSIPYKIS S +C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAACCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.079e-23 Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = -2 Query: 228 SQMAALKLVS-ALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 578 ++ AA +LV A+V ML+ + AI+CGQVS +L+PCI + R +G P+ CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DC K+R Sbjct: 2 ARAAATQLVLVAMVAAMLIVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.549e-22 Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = -2 Query: 228 SQMAALKLVS-ALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 578 ++ AA +LV A+V ML+ + AI+CGQVS +L+PCI + R +G P+ CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DC K+R Sbjct: 2 ARAAATQLVLVAMVAAMLLVA--TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.549e-22 Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = -2 Query: 228 SQMAALKLVSALVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLR-SGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKVR 578 SQ+ + LV+A++L + AI+CGQVS +L+PCI + R +G P CC+GV+ L AA++T D+Q AC C+K AA LN AAG+P CGVS+PY IS S DC K+R Sbjct: 7 SQLVLVALVAAMLLVA------ADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSAAGG---LNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CF835380 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.023e-22 Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = -2 Query: 231 AITCGQVSGSLAPCIGFLRSGGPIPMPCC-NGVRSLNAAARTTPDRQTACNC-LKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSADCYKV 503 AI+CGQVS ++ PC+ + R G P C +GVRSLNAAARTT DR+ ACNC LK AA + LN A+ +PG CGV +PY IS S DC +V Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93 The following BLAST results are available for this feature:
BLAST of CF835380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835380 ID=CF835380; Name=CF835380; organism=Citrus sinensis; type=EST; length=594bpback to top |